DR404524

Overview
NameDR404524
Unique NameDR404524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR404524_ssr20 microsatellite DR404524_ssr20:20..49. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6214 contig Csv1_Contig6214:1..741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404524 vs. ExPASy Swiss-Prot
Match: PPA2_ARATH (Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.332e-70
Identity = 122/184 (66.30%), Postives = 148/184 (80.43%), Query Frame = 1
Query:  193 SGDTVSIQWSNVPSPSKLDWLGIYSPPDSRHDHFIGYKFLSESPTWASGSGTISIPLTNLRSSYSFRIFRWADSEINPKKQDHDHNPLPGTAHLLASAGSVGFETGRG-PEQVHLAFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGQVAATSVERYERDQMCDKPANSSIGWRDPGWXFDAV 741
            SGD+V IQWS V SPS LDWLG+YSPP+S +DHFIGYKFL+ES TW  G G+IS+PLTNLRS+Y+FRIFRW++SEI+PK +DHD NPLPGT HLLA +  + F +G G PEQ+HL+FT   + MRVMF+A DGE+R+V+YGE KD +G  AA    RYER+ MCD PANS+IGWRDPGW FD V
Sbjct:   36 SGDSVVIQWSGVDSPSDLDWLGLYSPPESPNDHFIGYKFLNESSTWKDGFGSISLPLTNLRSNYTFRIFRWSESEIDPKHKDHDQNPLPGTKHLLAESEQLTFGSGVGMPEQIHLSFTNMVNTMRVMFVAGDGEERFVRYGESKDLLGNSAAARGMRYEREHMCDSPANSTIGWRDPGWIFDTV 219          
BLAST of DR404524 vs. ExPASy Swiss-Prot
Match: PPA9_ARATH (Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 8.863e-70
Identity = 119/184 (64.67%), Postives = 143/184 (77.72%), Query Frame = 1
Query:  193 SGDTVSIQWSNVPSPSKLDWLGIYSPPDSRHDHFIGYKFLSESPTWASGSGTISIPLTNLRSSYSFRIFRWADSEINPKKQDHDHNPLPGTAHLLASAGSVGFETG-RGPEQVHLAFTEDASEMRVMFLAEDGEKRYVKYGEKKDQMGQVAATSVERYERDQMCDKPANSSIGWRDPGWXFDAV 741
            SGD V I+WS V SPS LDWLGIYSPPDS HDHFIGYKFLS+SPTW SGSG+IS+PLTNLRS+Y+FRIF W  SEINPK QDHDHNPLPGT HLL  +  + F      PEQ+HL++T++ +EMRV+F+  DGE+R  +YGE KD++  +A     RYE + MC  PANS++GWRDPGW FDAV
Sbjct:   34 SGDIVVIKWSGVESPSDLDWLGIYSPPDSPHDHFIGYKFLSDSPTWQSGSGSISLPLTNLRSNYTFRIFHWTQSEINPKHQDHDHNPLPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNINEMRVVFVTGDGEEREARYGEVKDKLDNIAVARGVRYEIEHMCHAPANSTVGWRDPGWTFDAV 217          
BLAST of DR404524 vs. ExPASy Swiss-Prot
Match: PPA1_ARATH (Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.465e-11
Identity = 58/205 (28.29%), Postives = 89/205 (43.41%), Query Frame = 1
Query:  199 DTVSIQWSNVPSPSKLDWLGIYSPPDSRHDHFIGYKFLSESPTWAS------------------GSGTISIPLTNLRSSYSFRIFRWADSEINPKKQDHDHNPLPGTAHLLASAGSVGFETGRGPEQVHLAFTEDASEMRVMF-------LAEDGEKRYVKYGEKKDQMGQVAATSVERYERDQMCDKPANSSIGWRDPGWXFDA 738
            + V +Q+S+ P PS  DW+G++SP D       G   + + P   S                  G+G++ + L N RS +SF +F  +   +NPK              L+A +  V FE    P    LA  ++  EM V +       LAE   +  VK GE+K     ++      + R+ MC  PA  ++GWRDPG+   A
Sbjct:   63 ELVLVQYSS-PKPSDDDWIGVFSPADFNASTCPGDNKMVQPPRLCSAPVKFQYANFSNPRYTNTGTGSLKLQLINQRSDFSFALF--SGGLLNPK--------------LVAISNKVAFENPNAPVYPRLALGKEWDEMTVTWTSGYGLNLAEPVVEWGVKGGERK-----LSPAGTLTFARNSMCGAPAR-TVGWRDPGYIHTA 244          
The following BLAST results are available for this feature:
BLAST of DR404524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PPA2_ARATH2.332e-7066.30Probable inactive purple acid phosphatase 2 OS=Ara... [more]
PPA9_ARATH8.863e-7064.67Probable inactive purple acid phosphatase 9 OS=Ara... [more]
PPA1_ARATH5.465e-1128.29Probable inactive purple acid phosphatase 1 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243J19 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243J19 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404524 ID=DR404524; Name=DR404524; organism=Citrus sinensis; type=EST; length=741bp
GGGGATCACTCATTTTCATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCA
GCCTCCTTCAACAAATAGTTTCTCCTCCACCACCACGACGGAGATGAAAA
TGATCCCTCTCTTAATTCTCCTCTTTCTAGCCCCCACCCCATCTCTATCC
GCACCCACCACGCTCACAGTCACCCCCAAAACCCTTACCAAATCAGGCGA
CACTGTTTCAATCCAATGGTCAAACGTCCCCTCCCCTTCAAAGCTCGACT
GGCTCGGCATCTACTCCCCGCCCGACTCGCGCCACGACCATTTCATCGGC
TACAAGTTCCTCTCCGAATCACCCACATGGGCTTCCGGGTCGGGCACAAT
TTCAATTCCCCTCACCAACCTCCGCTCCTCGTACTCCTTCCGGATCTTCC
GCTGGGCCGACTCCGAAATCAACCCCAAGAAGCAAGACCACGATCACAAC
CCTCTCCCCGGTACGGCCCACTTGTTGGCTAGTGCCGGGTCTGTCGGGTT
CGAGACGGGACGGGGCCCCGAGCAGGTGCACTTGGCGTTCACGGAGGATG
CGAGTGAGATGAGGGTGATGTTTCTGGCGGAAGATGGGGAAAAGAGGTAT
GTGAAGTACGGTGAGAAGAAGGATCAGATGGGACAAGTGGCGGCGACAAG
TGTGGAGAGGTATGAGAGGGATCAAATGTGCGATAAGCCTGCGAATTCGA
GCATTGGCTGGAGGGATCCTGGCTGGATNTTTGATGCTGTT
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