CX070594

Overview
NameCX070594
Unique NameCX070594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA1_ARATH (Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic OS=Arabidopsis thaliana GN=GSA1 PE=1 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 5.790e-104
Identity = 185/237 (78.06%), Postives = 206/237 (86.92%), Query Frame = 1
Query:   49 MAATITXXXXXXXXSCSSKLTNRFXXXXXXXXXXVKMSVSVEEQRKNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            M+AT+T        SCSSK++ R           +KMSVSV+E++K+F+L+KSEEAFN AK LMPGGVNSPVRAFKSVGGQP++ DSVKGS MWDIDGNEYIDYVGSWGPAIIGHADD+VLAAL ETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT +E+ IKFEGCYHGHA+ FLVKAGSGVATLGLPDSPGVPK AT +TLTAP+ND+ A+E
Sbjct:    1 MSATLTGSGTALGFSCSSKISKRVSSSPASNRCCIKMSVSVDEKKKSFSLQKSEEAFNAAKNLMPGGVNSPVRAFKSVGGQPVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTNKEKFIKFEGCYHGHANAFLVKAGSGVATLGLPDSPGVPKAATSDTLTAPYNDLEAVE 237          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_BRANA (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Brassica napus GN=GSA PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 8.361e-103
Identity = 185/236 (78.39%), Postives = 205/236 (86.86%), Query Frame = 1
Query:   49 MAATITXXXXXXXXSCSSKLTNRFXXXXXXXXXXVKMSVSVEEQRKNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 756
            M+AT+T        SCSSK++ R           +KMSVSV+E++K+FTL+KSEEAFN AK LMPGGVNSPVRAFKSVGGQP++ DSVKGS MWDIDGNEYIDYVGSWGPAIIGHADD+VLAAL ETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT +E+ IKFEGCYHGHA+ FLVKAGSGVATLGLPDSPGVPK AT +TLTAP+ND+ A+
Sbjct:    1 MSATLTGSGTALGFSCSSKISKRVSSSPSTRCS-IKMSVSVDEKKKSFTLQKSEEAFNAAKNLMPGGVNSPVRAFKSVGGQPVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTNKEKFIKFEGCYHGHANAFLVKAGSGVATLGLPDSPGVPKAATSDTLTAPYNDIEAV 235          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA2_ARATH (Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic OS=Arabidopsis thaliana GN=GSA2 PE=2 SV=2)

HSP 1 Score: 368.622 bits (945), Expect = 2.059e-101
Identity = 185/237 (78.06%), Postives = 203/237 (85.65%), Query Frame = 1
Query:   49 MAATITXXXXXXXXSCSSKLTNRFXXXXXXXXXXVKMSVSVEEQRKNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            MAAT+T        SCS+K + R           +KMSVSVEE+ K FTL+KSEEAFN AK LMPGGVNSPVRAFKSVGGQP+V DS KGS + DIDGNEYIDYVGSWGPAIIGHADD+VLAAL ETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG+++ IKFEGCYHGHA+ FLVKAGSGVATLGLPDSPGVPK AT +TLTAP+ND++A+E
Sbjct:    1 MAATLTGSGIALGFSCSAKFSKR--ASSSSNRRCIKMSVSVEEKTKKFTLQKSEEAFNAAKNLMPGGVNSPVRAFKSVGGQPVVMDSAKGSRIRDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGKQKFIKFEGCYHGHANSFLVKAGSGVATLGLPDSPGVPKAATSDTLTAPYNDIAAVE 235          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_TOBAC (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Nicotiana tabacum GN=GSA PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.130e-99
Identity = 177/204 (86.76%), Postives = 192/204 (94.12%), Query Frame = 1
Query:  151 VKMSVSVEEQRKNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 762
            +KM+ SV+E++K FTL+KSEEAF+ AKELMPGGVNSPVRAFKSVGGQPI+ DSVKGS M DIDGNEYIDYVGSWGPAIIGHADD+VLAAL ETMKKGTSFGAPCLLEN LAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR +IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG PK AT +TLTAP+ND+SA+E+
Sbjct:   39 IKMTASVDEKKKTFTLQKSEEAFSKAKELMPGGVNSPVRAFKSVGGQPIIIDSVKGSRMRDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENTLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRPKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGGPKAATSDTLTAPYNDISAVES 242          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SOLLC (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.288e-99
Identity = 176/204 (86.27%), Postives = 192/204 (94.12%), Query Frame = 1
Query:  151 VKMSVSVEEQRKNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 762
            ++M+ SV+E++K FTL+KSEEAF+ AKELMPGGVNSPVRAFKSVGGQPI+ DSVKGS M DIDGNEYIDYVGSWGPAIIGHADD+VLAAL ETMKKGTSFGAPCLLEN LAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT R +IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPK AT +TLTAP+ND+SA+E+
Sbjct:   42 IRMTASVDEKKKTFTLEKSEEAFSKAKELMPGGVNSPVRAFKSVGGQPIIIDSVKGSRMRDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENTLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTCRPKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATIDTLTAPYNDISAVES 245          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SOYBN (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Glycine max GN=GSA1 PE=2 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 9.566e-99
Identity = 177/204 (86.76%), Postives = 187/204 (91.67%), Query Frame = 1
Query:  151 VKMSVSVEEQRKN-FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            V M+VS++ +  N  TL KSEEAF  AKELMPGGVNSPVRAFKSVGGQPIV DSVKGS MWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLEN LAE+VI AVPSIEMVRFVNSGTEACMG LRLARA+TGRE+IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPK AT+ETLTAP+ND  A+E
Sbjct:   26 VAMAVSIDPKTDNKLTLTKSEEAFAAAKELMPGGVNSPVRAFKSVGGQPIVIDSVKGSRMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENTLAELVIDAVPSIEMVRFVNSGTEACMGALRLARAYTGREKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATFETLTAPYNDTEAIE 229          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_ORYSJ (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Oryza sativa subsp. japonica GN=GSA PE=2 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.058e-97
Identity = 173/203 (85.22%), Postives = 188/203 (92.61%), Query Frame = 1
Query:  151 VKMSVSVEEQRKNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            V+ ++SVE+  K +T++KSEE FN AKELMPGGVNSPVRAFKSVGGQPIVFDSVKGS MWD+DGNEYIDYVGSWGPAIIGHADD V AAL ET+KKGTSFGAPC+LENVLAEMVISAVPSIEMVRFVNSGTEACMG LRL RAFTGRE+I+KFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPKGAT ETLTAP+NDV A++
Sbjct:   39 VRAAISVEKGEKAYTVEKSEEIFNAAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSRMWDVDGNEYIDYVGSWGPAIIGHADDTVNAALIETLKKGTSFGAPCVLENVLAEMVISAVPSIEMVRFVNSGTEACMGALRLVRAFTGREKILKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKGATSETLTAPYNDVEAVK 241          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_HORVU (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Hordeum vulgare GN=GSA PE=1 SV=3)

HSP 1 Score: 350.517 bits (898), Expect = 5.803e-96
Identity = 171/203 (84.24%), Postives = 187/203 (92.12%), Query Frame = 1
Query:  151 VKMSVSVEEQRKNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            V+ +VS++E  K +T++KSEE FN AKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWD+DGNEYIDYVGSWGPAIIGHADD+V AAL ET+KKGTSFGAPC LENVLA+MVISAVPSIEMVRFVNSGTEACMG LRL RAFTGRE+I+KFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPKGAT  TLTAP+ND  A++
Sbjct:   32 VRAAVSIDE--KAYTVQKSEEIFNAAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDVDGNEYIDYVGSWGPAIIGHADDKVNAALIETLKKGTSFGAPCALENVLAQMVISAVPSIEMVRFVNSGTEACMGALRLVRAFTGREKILKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKGATVGTLTAPYNDADAVK 232          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_SYNP2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=hemL PE=3 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.702e-85
Identity = 151/186 (81.18%), Postives = 170/186 (91.40%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSEE F+ A++LMPGGV+SPVRAFKSVGGQPIVFD VKGS +WD+DGNEYIDYVG+WGPAI GHA+D+V AAL ET++KGTSFGAPCL EN+LAEMVI+AVPSIEMVRFVNSGTEACM VLRL RAFTGRE+IIKFEGCYHGHAD FLV+AGSGVATLGLPDSPGVPK  T  TLTAP+ND+ A++
Sbjct:   10 KSEEIFSAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKGSRVWDVDGNEYIDYVGTWGPAICGHANDEVNAALRETLEKGTSFGAPCLKENILAEMVINAVPSIEMVRFVNSGTEACMSVLRLMRAFTGREKIIKFEGCYHGHADMFLVQAGSGVATLGLPDSPGVPKTTTAATLTAPYNDLEAVK 195          
BLAST of CX070594 vs. ExPASy Swiss-Prot
Match: GSA_ACAM1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acaryochloris marina (strain MBIC 11017) GN=hemL PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.902e-84
Identity = 147/186 (79.03%), Postives = 166/186 (89.25%), Query Frame = 1
Query:  202 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 759
            KSEE F  A++LMPGGV+SPVRAFKSVGGQPIVFD VKG+H+WD+DGN+YIDYVG+WGPAI GHA  +VL AL E + KGTSFGAPCLLENVLAEMVI AVPS+E+VRFVNSGTEACM VLRL RAFTGRE++IKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK  T  TLTAP+ND+ +++
Sbjct:   10 KSEEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKGAHVWDVDGNQYIDYVGTWGPAICGHAHPEVLTALKEALDKGTSFGAPCLLENVLAEMVIDAVPSVEVVRFVNSGTEACMSVLRLMRAFTGREKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKSVTGNTLTAPYNDLQSVQ 195          
The following BLAST results are available for this feature:
BLAST of CX070594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA1_ARATH5.790e-10478.06Glutamate-1-semialdehyde 2,1-aminomutase 1, chloro... [more]
GSA_BRANA8.361e-10378.39Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA2_ARATH2.059e-10178.06Glutamate-1-semialdehyde 2,1-aminomutase 2, chloro... [more]
GSA_TOBAC1.130e-9986.76Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_SOLLC3.288e-9986.27Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_SOYBN9.566e-9986.76Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_ORYSJ1.058e-9785.22Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_HORVU5.803e-9684.24Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_SYNP22.702e-8581.18Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_ACAM13.902e-8479.03Glutamate-1-semialdehyde 2,1-aminomutase OS=Acaryo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070594 ID=CX070594; Name=CX070594; organism=Citrus sinensis; type=EST; length=763bp
CATTGACCGAGGAAAAGAGAAAGAGACTTCAGAGAGAGCGACACAAAAAT
GGCAGCTACAATTACAGGGGTAGGAGTTGGGTTAGGGCTTTCATGTTCAT
CAAAGCTCACCAACAGATTTTCTTCTTCTGCTGGATCCTCTCGCTGTAGT
GTTAAAATGTCGGTCTCTGTTGAGGAGCAGAGGAAAAATTTCACTTTAAA
AAAATCTGAAGAAGCTTTCAATGTCGCCAAGGAATTGATGCCTGGAGGTG
TAAATTCACCTGTACGTGCCTTCAAATCTGTTGGTGGTCAACCTATTGTG
TTTGATTCCGTCAAGGGCTCACACATGTGGGATATCGATGGCAATGAGTA
CATTGACTATGTAGGTTCTTGGGGGCCGGCAATTATTGGTCACGCAGATG
ATCAGGTACTAGCAGCCTTGGGTGAAACAATGAAGAAAGGAACAAGCTTT
GGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAGAAATGGTAATCTCAGC
TGTTCCAAGCATAGAAATGGTTCGTTTTGTTAACTCAGGCACAGAAGCAT
GCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCACTGGGAGAGAGAGGATC
ATCAAATTTGAGGGTTGTTATCATGGCCATGCTGATCCATTTCTTGTCAA
GGCTGGTAGTGGAGTTGCCACCCTAGGGCTTCCCGACTCCCCTGGTGTTC
CTAAAGGAGCCACCTATGAAACTTTGACAGCCCCCTTCAATGATGTCTCG
GCTTTGGAAAATC
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