CX070593

Overview
NameCX070593
Unique NameCX070593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA2_ARATH (Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic OS=Arabidopsis thaliana GN=GSA2 PE=2 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 4.277e-78
Identity = 138/172 (80.23%), Postives = 151/172 (87.79%), Query Frame = -2 
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            I PKP+F+  IRRITK+NGALLIFDEVMTGFRLAYGGAQEYFG+TPD           LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL +PGTYEYL+KIT ELT GI++AGKK GHA+CGGYISGMFGFFFTEGPVY+F DAKKS+T KF +F+RG
Sbjct:  260 ITPKPEFIEGIRRITKDNGALLIFDEVMTGFRLAYGGAQEYFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLSQPGTYEYLDKITKELTNGILEAGKKTGHAMCGGYISGMFGFFFTEGPVYDFSDAKKSDTEKFGKFFRG 431
[Close]
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_BRANA (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Brassica napus GN=GSA PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 4.728e-77
Identity = 135/172 (78.49%), Postives = 150/172 (87.21%), Query Frame = -2 
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            I P P+F+N +R++TK+NGALLIFDEVMTGFRLAYGGAQEYFG+TPD           LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK+PGTYEYL+KIT ELT GI++AGKK GH +CGGYISGMFGFFF EGPVYNF DAKKS+T KF +F+RG
Sbjct:  261 ITPTPEFINGLRQLTKDNGALLIFDEVMTGFRLAYGGAQEYFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKQPGTYEYLDKITKELTNGILEAGKKTGHPMCGGYISGMFGFFFAEGPVYNFADAKKSDTEKFGKFFRG 432
[Close]
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_TOBAC (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Nicotiana tabacum GN=GSA PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 1.797e-76
Identity = 140/172 (81.40%), Postives = 147/172 (85.47%), Query Frame = -2 
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            I P  DFL AIR+ITKEN ALLIFDEVMTGFRLAYGGAQEYFG+TPD           LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL+ PGTYEYL+KITGELTQGI+DAGKK GHA+CGGYI GMFGF F EGPV NF DAKKS+T KF RFYRG
Sbjct:  266 IQPNLDFLAAIRKITKENDALLIFDEVMTGFRLAYGGAQEYFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQGPGTYEYLDKITGELTQGILDAGKKTGHAMCGGYIRGMFGFLFAEGPVNNFSDAKKSDTEKFGRFYRG 437
[Close]
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA1_ARATH (Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic OS=Arabidopsis thaliana GN=GSA1 PE=1 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 1.521e-75
Identity = 133/172 (77.33%), Postives = 148/172 (86.05%), Query Frame = -2 
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            I P P+F+N +R++TK+NG LLIFDEVMTGFRLAYGGAQEYFG+TPD           LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK+ GTYEYL+KIT ELT GI++AGKK GH +CGGYISGMFGFFF EGPVYNF D+KKS+T KF RF+RG
Sbjct:  262 IPPTPEFINGLRQLTKDNGVLLIFDEVMTGFRLAYGGAQEYFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKQAGTYEYLDKITKELTNGILEAGKKTGHPMCGGYISGMFGFFFAEGPVYNFADSKKSDTEKFGRFFRG 433
[Close]
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_SOYBN (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Glycine max GN=GSA1 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 3.389e-75
Identity = 134/172 (77.91%), Postives = 149/172 (86.63%), Query Frame = -2 
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            I PKPDF + +R+ITKEN  LL+FDEVMTGFRL+YGGAQEYFG+TPD           LPVGAYGGRRDIME VAPAGPMYQAGTLSGNPLAMTAGI TL+R+KEPGTYEYL+KITGEL +GII+AGK+AGHAICGG+I GMFGFFFTEGPVYNF DAKKS+T KFARF+ G
Sbjct:  254 IVPKPDFHSFLRKITKENNTLLVFDEVMTGFRLSYGGAQEYFGITPDITTLGKIIGGGLPVGAYGGRRDIMEKVAPAGPMYQAGTLSGNPLAMTAGIETLQRIKEPGTYEYLDKITGELVEGIIEAGKRAGHAICGGHIRGMFGFFFTEGPVYNFADAKKSDTAKFARFFWG 425
[Close]
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_SOLLC (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 1.288e-74
Identity = 136/172 (79.07%), Postives = 147/172 (85.47%), Query Frame = -2 
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            I PK +FL AIR+ITKEN ALLIFDEVMTGFRLAYGGAQEYFG+TPD           LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL+  GTYE+L+KIT ELTQGI+DAGKK GHA+CGG I GMFGFFF +GP+YNF DAKKS+T KF RFYRG
Sbjct:  269 IPPKLEFLAAIRKITKENDALLIFDEVMTGFRLAYGGAQEYFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQGQGTYEHLDKITAELTQGILDAGKKTGHAMCGGSIRGMFGFFFADGPIYNFSDAKKSDTEKFGRFYRG 440
[Close]
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_ORYSJ (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Oryza sativa subsp. japonica GN=GSA PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 3.747e-74
Identity = 130/172 (75.58%), Postives = 148/172 (86.05%), Query Frame = -2 
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            I P+P FLNA+R +TK++GALL+FDEVMTGFRLAYGGAQEYFG+TPD           LPVGAYGGR+DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL EPGTY+YL+KITG+L +G++DAG K GH +CGG+I GMFGFFFT GPV+NF DAKKS+T KF RFYRG
Sbjct:  266 IPPQPGFLNALRDLTKQDGALLVFDEVMTGFRLAYGGAQEYFGITPDVSTLGKIIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLMEPGTYDYLDKITGDLVRGVLDAGAKTGHEMCGGHIRGMFGFFFTAGPVHNFGDAKKSDTAKFGRFYRG 437
[Close]
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_HORVU (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Hordeum vulgare GN=GSA PE=1 SV=3)

HSP 1 Score: 275.789 bits (704), Expect = 8.347e-74
Identity = 129/172 (75.00%), Postives = 147/172 (85.47%), Query Frame = -2 
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            I P+P FLNA+R +TK++GALL+FDEVMTGFRLAYGGAQEYFG+TPD           LPVGAYGGR+DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL EPGTYEYL+K+TGEL +GI+D G K GH +CGG+I GMFGFFF  GPV+NF+DAKKS+T KF RF+RG
Sbjct:  257 IPPQPAFLNALREVTKQDGALLVFDEVMTGFRLAYGGAQEYFGITPDVTTLGKIIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLMEPGTYEYLDKVTGELVRGILDVGAKTGHEMCGGHIRGMFGFFFAGGPVHNFDDAKKSDTAKFGRFHRG 428
[Close]
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_NOSP7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemL PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 8.657e-63
Identity = 115/172 (66.86%), Postives = 133/172 (77.33%), Query Frame = -2 
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            IAP   FL  +R +T E GALL+FDEVMTGFR+AYGGAQE FGVTPD           LPVGAYGGRRDIM MVAPAGP+YQAGTLSGNPLAMTAGI TL+ L++PGTY+YL +IT +L  G++   K+ GH  CGG IS MFG FFT GPV+N+EDAKKS+T KF RF+RG
Sbjct:  220 IAPDAGFLEGLRELTHEYGALLVFDEVMTGFRIAYGGAQEKFGVTPDLTTLGKVIGGGLPVGAYGGRRDIMSMVAPAGPVYQAGTLSGNPLAMTAGIKTLELLQKPGTYDYLERITKKLADGLLQIAKETGHTACGGQISAMFGLFFTSGPVHNYEDAKKSDTAKFGRFHRG 391
[Close]
BLAST of CX070593 vs. ExPASy Swiss-Prot
Match: GSA_SYNE7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus elongatus (strain PCC 7942) GN=hemL PE=1 SV=3)

HSP 1 Score: 238.424 bits (607), Expect = 1.477e-62
Identity = 113/172 (65.70%), Postives = 137/172 (79.65%), Query Frame = -2 
Query:    1 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 516
            I P   FL  +R IT E+ ALL+FDEVMTGFR+AYGG QE FGVTPD           LPVGAYGG+R+IM++VAPAGPMYQAGTLSGNPLAMTAGI TL+ L++PGTYEYL++IT  L+ G++   ++ GHA CGG +SGMFGFFFTEGPV+N+EDAKKS+  KF+RF+RG
Sbjct:  221 IVPDAGFLEGLREITLEHDALLVFDEVMTGFRIAYGGVQEKFGVTPDLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRG 392
The following BLAST results are available for this feature:
BLAST of CX070593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA2_ARATH4.277e-7880.23Glutamate-1-semialdehyde 2,1-aminomutase 2, chloro... [more]
GSA_BRANA4.728e-7778.49Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_TOBAC1.797e-7681.40Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA1_ARATH1.521e-7577.33Glutamate-1-semialdehyde 2,1-aminomutase 1, chloro... [more]
GSA_SOYBN3.389e-7577.91Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_SOLLC1.288e-7479.07Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_ORYSJ3.747e-7475.58Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_HORVU8.347e-7475.00Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_NOSP78.657e-6366.86Glutamate-1-semialdehyde 2,1-aminomutase OS=Nostoc... [more]
GSA_SYNE71.477e-6265.70Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17G04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17G04-M7-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070593 ID=CX070593; Name=CX070593; organism=Citrus sinensis; type=EST; length=517bp
TCCCCTGTAAAATCTTGCAAACTTTGTGGTTTCACTCTTCTTTGCATCCT
CAAAGTTGTAAACAGGCCCTTCGGTAAAGAAAAATCCAAACATCCCACTT
ATATACCCTCCACAAATGGCATGCCCAGCTTTCTTTCCAGCATCAATGAT
GCCTTGAGTAAGTTCACCTGTGATCTTATTCAAGTATTCATAAGTTCCTG
GCTCCTTCAATCGTTTAAGGGTGTGTATCCCAGCGGTCATTGCCAATGGA
TTCCCACTTAAGGTCCCAGCCTGGTACATTGGGCCTGCCGGTGCCACCAT
CTCCATGATATCCCTTCTTCCTCCATAAGCACCAACTGGCAGCCCACCTC
CAATGATTTTACCAAGAGTTGTCAAATCAGGAGTTACCCCAAAATATTCC
TGAGCTCCACCATAAGCTAAACGAAATCCAGTCATGACTTCATCAAAGAT
CAGGAGAGCACCATTCTCTTTGGTGATACGGCGGATGGCATTAAGAAAGT
CAGGCTTAGGAGCAATG
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