CX070577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_CITSI (30S ribosomal protein S19, chloroplastic OS=Citrus sinensis GN=rps19 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.988e-47 Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIP MVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR Sbjct: 1 MTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_EUCGG (30S ribosomal protein S19, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rps19 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.455e-46 Identity = 87/92 (94.57%), Postives = 91/92 (98.91%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFVANHLLRKI+KLNTKAEKEIIITWSRASTIIP M+GHTIAIHNGREHLPIYITDRMVGHKLGEF+PTINFRGHAKNDNRSRR Sbjct: 1 MTRSLKKNPFVANHLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPIYITDRMVGHKLGEFSPTINFRGHAKNDNRSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_CARPA (30S ribosomal protein S19, chloroplastic OS=Carica papaya GN=rps19 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.104e-45 Identity = 86/92 (93.48%), Postives = 91/92 (98.91%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFVANHLLRKI+KLNTKAEKEIIITWSRASTIIP M+GHTIAIHNGREHLP+YITDRMVGHKLGEFAPTINFRGHAKNDN+SRR Sbjct: 1 MTRSLKKNPFVANHLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYITDRMVGHKLGEFAPTINFRGHAKNDNKSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_PLAOC (30S ribosomal protein S19, chloroplastic OS=Platanus occidentalis GN=rps19 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.460e-45 Identity = 85/92 (92.39%), Postives = 91/92 (98.91%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFVANHLLRKI+KLNTKAEKEII+TWSRASTIIP M+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+NFRGHAKNDNRSRR Sbjct: 1 MTRSLKKNPFVANHLLRKIEKLNTKAEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTMNFRGHAKNDNRSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_FAGEA (30S ribosomal protein S19, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=rps19 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.158e-45 Identity = 82/92 (89.13%), Postives = 90/92 (97.83%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFVANHLLRK+DKLNTK EKEII+TWSRASTIIP M+GHTIAIHNGREHLP+YITDRM+GHKLGEF+PT+NFRGHAKNDNRSRR Sbjct: 1 MTRSLKKNPFVANHLLRKLDKLNTKEEKEIIVTWSRASTIIPTMIGHTIAIHNGREHLPVYITDRMIGHKLGEFSPTLNFRGHAKNDNRSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_SPIOL (30S ribosomal protein S19 alpha, chloroplastic OS=Spinacia oleracea GN=rps19 PE=1 SV=4) HSP 1 Score: 180.259 bits (456), Expect = 9.349e-45 Identity = 84/92 (91.30%), Postives = 90/92 (97.83%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFVANHLLRKI+KLN KAEKEII+TWSRASTIIP M+GHTIAIHNGREHLPIYITDRMVGHKLGEFAPT+NFRGHAKNDN+SRR Sbjct: 1 MTRSLKKNPFVANHLLRKIEKLNKKAEKEIIVTWSRASTIIPTMIGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTLNFRGHAKNDNKSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_SOYBN (30S ribosomal protein S19, chloroplastic OS=Glycine max GN=rps19 PE=3 SV=3) HSP 1 Score: 180.259 bits (456), Expect = 9.349e-45 Identity = 84/92 (91.30%), Postives = 91/92 (98.91%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFVANHLLRKI+KLNTKAEK+IIITWSRASTIIP M+GHTIAIHNG+EHLPIYITDRMVGHKLGEF+PT+NFRGHAKNDNRSRR Sbjct: 1 MTRSLKKNPFVANHLLRKINKLNTKAEKDIIITWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTLNFRGHAKNDNRSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_PHAVU (30S ribosomal protein S19, chloroplastic OS=Phaseolus vulgaris GN=rps19 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.595e-44 Identity = 83/92 (90.22%), Postives = 91/92 (98.91%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFVANHLLRKI+KLNTKAEK+II+TWSRASTIIP M+GHTIAIHNG+EHLPIYITDRMVGHKLGEF+PT+NFRGHAKNDNRSRR Sbjct: 1 MTRSLKKNPFVANHLLRKINKLNTKAEKDIILTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTLNFRGHAKNDNRSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_PHAAN (30S ribosomal protein S19, chloroplastic OS=Phaseolus angularis GN=rps19 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.595e-44 Identity = 83/92 (90.22%), Postives = 91/92 (98.91%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFVANHLLRKI+KLNTKAEK+II+TWSRASTIIP M+GHTIAIHNG+EHLPIYITDRMVGHKLGEF+PT+NFRGHAKNDNRSRR Sbjct: 1 MTRSLKKNPFVANHLLRKINKLNTKAEKDIILTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTLNFRGHAKNDNRSRR 92
BLAST of CX070577 vs. ExPASy Swiss-Prot
Match: RR19_COFAR (30S ribosomal protein S19, chloroplastic OS=Coffea arabica GN=rps19 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.595e-44 Identity = 83/92 (90.22%), Postives = 90/92 (97.83%), Query Frame = -2 Query: 322 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPAMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 597 +TRSLKKNPFVANHLL+KIDKLNTKAEKEII+TWSRASTIIP M+GHTI IHNG+EHLPIYITDRMVGHKLGEFAPT+NFRGHAK+DNRSRR Sbjct: 1 MTRSLKKNPFVANHLLKKIDKLNTKAEKEIIVTWSRASTIIPTMIGHTIGIHNGKEHLPIYITDRMVGHKLGEFAPTLNFRGHAKSDNRSRR 92 The following BLAST results are available for this feature:
BLAST of CX070577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070577 ID=CX070577; Name=CX070577; organism=Citrus sinensis; type=EST; length=721bpback to top |