CX070576

Overview
NameCX070576
Unique NameCX070576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.162e-46
Identity = 90/132 (68.18%), Postives = 110/132 (83.33%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 398
            F+QFD+N DGKIS+ EL  V K+MG+SY E EL RV+E++DTD+DG+I+L EF T+CR+SS AA   E+R+AFDLYDQDKNGLISA EL+ VLNRLG+ CSV+ C  MI PVDADGDGNVNFEEF+ MMT+S
Sbjct:   28 FDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTLCRSSSSAA---EIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSS 156          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML26_ARATH (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana GN=CML26 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.138e-42
Identity = 85/131 (64.89%), Postives = 106/131 (80.92%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 395
            F++FDAN DGKIS++EL  V KSMG+SY EEEL RV++++D D DGFI+  EF TICR+SS A    E+REAFDLYDQ+KNGLIS+ E++ VLNRLG+ CSV+ CV MI  VD DGDGNVNFEEF+ MM++
Sbjct:   25 FDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATICRSSSSAV---EIREAFDLYDQNKNGLISSSEIHKVLNRLGMTCSVEDCVRMIGHVDTDGDGNVNFEEFQKMMSS 152          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.661e-36
Identity = 76/134 (56.72%), Postives = 100/134 (74.63%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSS----GAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 392
            FN+FDAN DGKIS  ELA VLK++GS+  +EE+ R+ME++DTDKDGFI++ EF    +  +     + GE EL+EAF+LYDQD NGLIS+ EL+ +L RLG + +   CV MIK VD+DGDG V+FEEF+ MMT
Sbjct:   25 FNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEEIDTDKDGFINVQEFAAFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHKILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEEFKKMMT 158          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.698e-31
Identity = 73/142 (51.41%), Postives = 95/142 (66.90%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSG------------AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 389
            F ++DAN DGKIS  ELA+VL+++G+     E+ R+M+++D+D+DGF+ LSEF    C  +              AA EAELREAF +YD D NG ISA EL+ VL +LG KCSV  C  MI+ VDADGDG VNF+EF+ MM
Sbjct:   10 FRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEFAAFHCGPTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDKCSVADCSRMIRSVDADGDGCVNFDEFKKMM 151          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.112e-28
Identity = 64/135 (47.41%), Postives = 86/135 (63.70%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGE-----AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 392
            F +FD N DGKIS+ EL  V++++  +   EE V +M+  D D +GFI L EF  + +   G  G      ++L+EAF+LYD D NG ISA+EL+ V+  LG KCSV  C  MI  VD DGDG VNF+EF+ MM+
Sbjct:   22 FQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMISKVDIDGDGCVNFDEFKKMMS 156          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.676e-28
Identity = 62/132 (46.97%), Postives = 87/132 (65.91%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEA---ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 389
            F +FD N DGKIS+ EL  V+ ++  +  +EE   +M++ D D +GFI L EF  + + S  ++  +   +L+EAFDLYD D+NG ISA EL+ V+  LG KCS+  C  MI  VD+DGDG V+FEEF+ MM
Sbjct:   20 FQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.139e-27
Identity = 66/131 (50.38%), Postives = 89/131 (67.94%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG--AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 389
            F +FDAN DG+IS +EL  + +S+G +  ++EL R+M + D D DGFISL EF  +  T+SG  AA E +LR AF ++D D NG ISA EL  VL+ LG K +V  C  MI+ VD +GDG ++FEEF+ MM
Sbjct:   45 FRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEEFKVMM 175          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML16_ORYSJ (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica GN=CML16 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.161e-26
Identity = 65/134 (48.51%), Postives = 83/134 (61.94%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEE----ELVRVMEDLDTDKDGFISLSEFETICRTSSG-AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 389
            F +FDA+ DG+IS +ELA V +++     E     E+  +M +LDTD+DGF+ L EF        G A  EAELR AFD+YD D +G I+A EL  VL R+G  CS + C  MI  VD DGDG V FEEF+ MM
Sbjct:   32 FTRFDADGDGRISPSELAAVTRAIAPPPSESAGGREVAAMMNELDTDRDGFVDLGEFAAFHGRGRGDAEHEAELRAAFDVYDVDGDGRITAAELGKVLGRIGEGCSAEECERMIASVDVDGDGCVGFEEFKKMM 165          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML15_ORYSJ (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica GN=CML15 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.066e-25
Identity = 61/131 (46.56%), Postives = 85/131 (64.89%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG--AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 389
            F +FDAN DG+IS  ELA + +S+G +  ++E+ R+M++ D+D DG+ISL EF  I     G  AA E +LR AF ++D D NG+I+  EL  VL  +G   +V  C  MI  VD +GDG +NFEEF+ MM
Sbjct:   60 FRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYISLGEFAAISAPPPGDAAAAEEDLRHAFGVFDADGNGVITPAELARVLRGIGEAATVAQCRRMIDGVDRNGDGLINFEEFKLMM 190          
BLAST of CX070576 vs. ExPASy Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.010e-24
Identity = 60/131 (45.80%), Postives = 80/131 (61.07%), Query Frame = 3
Query:    3 FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE-LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 392
            F +FD N DGKIS  EL  ++ S+G    EEEL + + ++D   DG+I+  EF  +           E L++AF +YD D NG ISAEEL+ VL  LG +CS+  C  MI  VD DGDG ++FEEF+ MMT
Sbjct:   42 FKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEEFKIMMT 172          
The following BLAST results are available for this feature:
BLAST of CX070576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 306
Match NameE-valueIdentityDescription
CML27_ARATH4.162e-4668.18Probable calcium-binding protein CML27 OS=Arabidop... [more]
CML26_ARATH2.138e-4264.89Probable calcium-binding protein CML26 OS=Arabidop... [more]
ALL8_OLEEU6.661e-3656.72Calcium-binding allergen Ole e 8 OS=Olea europaea ... [more]
CML18_ORYSJ1.698e-3151.41Probable calcium-binding protein CML18 OS=Oryza sa... [more]
CML24_ARATH5.112e-2847.41Calcium-binding protein CML24 OS=Arabidopsis thali... [more]
CML23_ARATH6.676e-2846.97Probable calcium-binding protein CML23 OS=Arabidop... [more]
CML10_ORYSJ1.139e-2750.38Probable calcium-binding protein CML10 OS=Oryza sa... [more]
CML16_ORYSJ8.161e-2648.51Probable calcium-binding protein CML16 OS=Oryza sa... [more]
CML15_ORYSJ1.066e-2546.56Probable calcium-binding protein CML15 OS=Oryza sa... [more]
CML25_ARATH2.010e-2445.80Probable calcium-binding protein CML25 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F07-K13-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070576 ID=CX070576; Name=CX070576; organism=Citrus sinensis; type=EST; length=577bp
TCTTCAACCAGTTCGACGCGAACAAGGACGGCAAGATCTCGCTGACGGAG
CTGGCGACCGTTTTGAAATCAATGGGATCGAGCTACAAAGAGGAGGAGCT
CGTCCGCGTCATGGAGGATCTCGATACCGACAAGGACGGATTCATCAGCC
TGTCGGAGTTCGAAACGATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAG
GCCGAGCTCCGCGAGGCGTTTGATCTCTACGATCAGGACAAGAACGGCTT
GATTTCGGCGGAGGAGTTGAATTTGGTGTTGAACAGGCTCGGAATTAAGT
GCTCGGTTGATGGATGTGTGGCGATGATTAAGCCGGTGGATGCCGATGGT
GATGGCAATGTGAATTTTGAAGAGTTTCGTTCGATGATGACTACTTCTCT
TAAACCTGGTCCTGCGCCGTAGATTTTGGTTTCGACGGTGATTCGATGGT
CGGCCGTACCGATATTAACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTC
CGTGCCTACTTGTGTCTACTACTTTTAATGTTAATAAACTCTGATGCATT
TTCAATGGTTTAAAAAAAAAAAAAAAA
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