CX070575

Overview
NameCX070575
Unique NameCX070575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.466e-46
Identity = 91/133 (68.42%), Postives = 111/133 (83.46%), Query Frame = -3
Query:  181 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 579
            VF+QFD+N DGKIS+ EL  V K+MG+SY E EL RV+E++DTD+DG+I+L EF T+CR+SS AA   E+R+AFDLYDQDKNGLISA EL+ VLNRLG+ CSV+ C  MI PVDADGDGNVNFEEF+ MMT+S
Sbjct:   27 VFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTLCRSSSSAA---EIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSS 156          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML26_ARATH (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana GN=CML26 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 7.531e-43
Identity = 86/132 (65.15%), Postives = 107/132 (81.06%), Query Frame = -3
Query:  184 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 579
            VF++FDAN DGKIS++EL  V KSMG+SY EEEL RV++++D D DGFI+  EF TICR+SS A    E+REAFDLYDQ+KNGLIS+ E++ VLNRLG+ CSV+ CV MI  VD DGDGNVNFEEF+ MM++
Sbjct:   24 VFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATICRSSSSAV---EIREAFDLYDQNKNGLISSSEIHKVLNRLGMTCSVEDCVRMIGHVDTDGDGNVNFEEFQKMMSS 152          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.347e-36
Identity = 77/135 (57.04%), Postives = 101/135 (74.81%), Query Frame = -3
Query:  187 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSS----GAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 579
            VFN+FDAN DGKIS  ELA VLK++GS+  +EE+ R+ME++DTDKDGFI++ EF    +  +     + GE EL+EAF+LYDQD NGLIS+ EL+ +L RLG + +   CV MIK VD+DGDG V+FEEF+ MMT
Sbjct:   24 VFNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEEIDTDKDGFINVQEFAAFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHKILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEEFKKMMT 158          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.981e-32
Identity = 74/143 (51.75%), Postives = 96/143 (67.13%), Query Frame = -3
Query:  190 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSG------------AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 579
            VF ++DAN DGKIS  ELA+VL+++G+     E+ R+M+++D+D+DGF+ LSEF    C  +              AA EAELREAF +YD D NG ISA EL+ VL +LG KCSV  C  MI+ VDADGDG VNF+EF+ MM
Sbjct:    9 VFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEFAAFHCGPTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDKCSVADCSRMIRSVDADGDGCVNFDEFKKMM 151          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.801e-28
Identity = 65/136 (47.79%), Postives = 87/136 (63.97%), Query Frame = -3
Query:  187 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGE-----AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 579
            VF +FD N DGKIS+ EL  V++++  +   EE V +M+  D D +GFI L EF  + +   G  G      ++L+EAF+LYD D NG ISA+EL+ V+  LG KCSV  C  MI  VD DGDG VNF+EF+ MM+
Sbjct:   21 VFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMISKVDIDGDGCVNFDEFKKMMS 156          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.352e-28
Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = -3
Query:  190 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEA---ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 579
            VF +FD N DGKIS+ EL  V+ ++  +  +EE   +M++ D D +GFI L EF  + + S  ++  +   +L+EAFDLYD D+NG ISA EL+ V+  LG KCS+  C  MI  VD+DGDG V+FEEF+ MM
Sbjct:   19 VFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 67/132 (50.76%), Postives = 90/132 (68.18%), Query Frame = -3
Query:  190 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG--AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 579
            VF +FDAN DG+IS +EL  + +S+G +  ++EL R+M + D D DGFISL EF  +  T+SG  AA E +LR AF ++D D NG ISA EL  VL+ LG K +V  C  MI+ VD +GDG ++FEEF+ MM
Sbjct:   44 VFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEEFKVMM 175          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML16_ORYSJ (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica GN=CML16 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.875e-26
Identity = 66/135 (48.89%), Postives = 84/135 (62.22%), Query Frame = -3
Query:  190 VFNQFDANKDGKISLTELATVLKSMGSSYKEE----ELVRVMEDLDTDKDGFISLSEFETICRTSSG-AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 579
            VF +FDA+ DG+IS +ELA V +++     E     E+  +M +LDTD+DGF+ L EF        G A  EAELR AFD+YD D +G I+A EL  VL R+G  CS + C  MI  VD DGDG V FEEF+ MM
Sbjct:   31 VFTRFDADGDGRISPSELAAVTRAIAPPPSESAGGREVAAMMNELDTDRDGFVDLGEFAAFHGRGRGDAEHEAELRAAFDVYDVDGDGRITAAELGKVLGRIGEGCSAEECERMIASVDVDGDGCVGFEEFKKMM 165          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML15_ORYSJ (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica GN=CML15 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.755e-26
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = -3
Query:  190 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG--AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 579
            VF +FDAN DG+IS  ELA + +S+G +  ++E+ R+M++ D+D DG+ISL EF  I     G  AA E +LR AF ++D D NG+I+  EL  VL  +G   +V  C  MI  VD +GDG +NFEEF+ MM
Sbjct:   59 VFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYISLGEFAAISAPPPGDAAAAEEDLRHAFGVFDADGNGVITPAELARVLRGIGEAATVAQCRRMIDGVDRNGDGLINFEEFKLMM 190          
BLAST of CX070575 vs. ExPASy Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.082e-25
Identity = 61/132 (46.21%), Postives = 81/132 (61.36%), Query Frame = -3
Query:  187 VFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE-LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 579
            VF +FD N DGKIS  EL  ++ S+G    EEEL + + ++D   DG+I+  EF  +           E L++AF +YD D NG ISAEEL+ VL  LG +CS+  C  MI  VD DGDG ++FEEF+ MMT
Sbjct:   41 VFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEEFKIMMT 172          
The following BLAST results are available for this feature:
BLAST of CX070575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
CML27_ARATH1.466e-4668.42Probable calcium-binding protein CML27 OS=Arabidop... [more]
CML26_ARATH7.531e-4365.15Probable calcium-binding protein CML26 OS=Arabidop... [more]
ALL8_OLEEU2.347e-3657.04Calcium-binding allergen Ole e 8 OS=Olea europaea ... [more]
CML18_ORYSJ5.981e-3251.75Probable calcium-binding protein CML18 OS=Oryza sa... [more]
CML24_ARATH1.801e-2847.79Calcium-binding protein CML24 OS=Arabidopsis thali... [more]
CML23_ARATH2.352e-2847.37Probable calcium-binding protein CML23 OS=Arabidop... [more]
CML10_ORYSJ4.012e-2850.76Probable calcium-binding protein CML10 OS=Oryza sa... [more]
CML16_ORYSJ2.875e-2648.89Probable calcium-binding protein CML16 OS=Oryza sa... [more]
CML15_ORYSJ3.755e-2646.97Probable calcium-binding protein CML15 OS=Oryza sa... [more]
CML25_ARATH7.082e-2546.21Probable calcium-binding protein CML25 OS=Arabidop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_17F07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F07-K13-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070575 ID=CX070575; Name=CX070575; organism=Citrus sinensis; type=EST; length=581bp
TTTTTTTTTTTTTTTTTAAACCATTGAAAATGCATCAGAGTTTATTAACA
TTAAAAGTAGTAGACACAAGTAGGCACGGAGGAAAACGACAGCCTATAAA
CGGACGCAAGTTAATATCGGTACGGCCGACCATCGAATCACCGTCGAAAC
CAAAATCTACGGCGCAGGACCAGGTTTAAGAGAAGTAGTCATCATCGAAC
GAAACTCTTCAAAATTCACATTGCCATCACCATCGGCATCCACCGGCTTA
ATCATCGCCACACATCCATCAACCGAGCACTTAATTCCGAGCCTGTTCAA
CACCAAATTCAACTCCTCCGCCGAAATCAAGCCGTTCTTGTCCTGATCGT
AGAGATCAAACGCCTCGCGGAGCTCGGCCTCGCCGGCGGCACCAGAGGAG
GTCCGGCAGATCGTTTCGAACTCCGACAGGCTGATGAATCCGTCCTTGTC
GGTATCGAGATCCTCCATGACGCGGACGAGCTCCTCCTCTTTGTAGCTCG
ATCCCATTGATTTCAAAACGGTCGCCAGCTCCGTCAGCGAGATCTTGCCG
TCCTTGTTCGCGTCGAACTGGTTGAAGACCT
back to top