CX070572

Overview
NameCX070572
Unique NameCX070572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_CITSI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Citrus sinensis GN=ndhK PE=3 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 7.411e-87
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_VITVI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Vitis vinifera GN=ndhK PE=3 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 1.545e-84
Identity = 155/159 (97.48%), Postives = 155/159 (97.48%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLDRTT NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_ACOCL (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Acorus calamus GN=ndhK PE=3 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 1.545e-84
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLDRTTPNS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKK+SR
Sbjct:    1 MNSIEFPLLDRTTPNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKLSR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_ACOAM (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Acorus americanus GN=ndhK PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.545e-84
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLDRTTPNS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKK+SR
Sbjct:    1 MNSIEFPLLDRTTPNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKLSR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_LIRTU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Liriodendron tulipifera GN=ndhK PE=3 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 2.018e-84
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLDRTT NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKK+SR
Sbjct:    1 MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_DRIGR (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Drimys granadensis GN=ndhK PE=3 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 2.018e-84
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLDRTT NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKK+SR
Sbjct:    1 MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_AMBTC (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Amborella trichopoda GN=ndhK PE=3 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 2.636e-84
Identity = 152/159 (95.60%), Postives = 155/159 (97.48%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNS+EF LLDRTTPNS ISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEA+IDAI KLRKK+SR
Sbjct:    1 MNSMEFPLLDRTTPNSVISTTPNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKVSR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_PANGI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Panax ginseng GN=ndhK PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.496e-84
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLDRTT NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTI+GGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTISGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_DAUCA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Daucus carota GN=ndhK PE=3 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 4.496e-84
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF LLDRTT NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTI+GGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKKISR
Sbjct:    1 MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTISGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
[Close]
BLAST of CX070572 vs. ExPASy Swiss-Prot
Match: NDHK_BUXMI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Buxus microphylla GN=ndhK PE=3 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 4.496e-84
Identity = 153/159 (96.23%), Postives = 155/159 (97.48%), Query Frame = -1 
Query:    7 MNSIEFSLLDRTTPNSFISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAIKKLRKKISR 483
            MNSIEF L+DRTT NS ISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI KLRKK+SR
Sbjct:    1 MNSIEFPLVDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSR 159
The following BLAST results are available for this feature:
BLAST of CX070572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHK_CITSI7.411e-8799.37NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_VITVI1.545e-8497.48NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_ACOCL1.545e-8496.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_ACOAM1.545e-8496.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_LIRTU2.018e-8496.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_DRIGR2.018e-8496.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_AMBTC2.636e-8495.60NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_PANGI4.496e-8496.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_DAUCA4.496e-8496.86NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]
NDHK_BUXMI4.496e-8496.23NAD(P)H-quinone oxidoreductase subunit K, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F05-K9-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070572 ID=CX070572; Name=CX070572; organism=Citrus sinensis; type=EST; length=708bp
CCCCCCTCGAGATATTTTCTTACGAAGTTTTTTTATGGCATCTATAACGG
CCTCTGGTTTAGGCGGGCAACCCGGCAAATAAACATCCACGGGAATTAGC
TTATCAACTCCTCGAACAGTACTATACGAATCGGTACTGAACATCCCCCC
TGTAATTGTACATGCTCCCATAGCAATAACATATTTTGGTTCAGGCATTT
GTTCATATAATCTCACTAAAGAAGGAGCCATTTTCATTGTTACTGTACCA
GCTGTTAAAATTAGGTCCGCCTGTCTAGGGCTCGATCTTGGTACCAGCCC
ATAACGGTCAAAATCGAACCGCGAGCCGATTAATGAAGCAAATTCAATGA
AACAACAACTGGTACCATAAAGAAGCGGCCATAAGCTGGAGAGTCTTGAC
CAATTTGAAAGATCGTTTGATGTAGTTGAAATAAATGAATTTGGGGTTGT
TCGATCAAGTAAGGAAAATTCAATAGAATTCATAATTCTCTCAATGTTAT
TTTTTGTTTTTTTTTTTTTTTTTACTTTTTTGTTATTGTCTGAATATTCA
GAAACTAAGACCACTCTAATGCTCCTTTTCGCCACGCATAAACTAAACCA
ACAATTAGGATAAGCATGAAAATGAAAGCTTCTATAAATACGGGTACCCC
CAATACATCAAAACTCATTGCCCATGGATAAAGAAAAACGGTTTCAACAT
CAAAAACA
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