CX070536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070536 vs. ExPASy Swiss-Prot
Match: H2AX_CICAR (Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.641e-21 Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 3 Query: 123 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 284 PKASKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV Sbjct: 14 PKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 67
BLAST of CX070536 vs. ExPASy Swiss-Prot
Match: H2AXB_ARATH (Probable histone H2AXb OS=Arabidopsis thaliana GN=At1g54690 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.657e-21 Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 3 Query: 123 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 284 PKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV Sbjct: 17 PKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
BLAST of CX070536 vs. ExPASy Swiss-Prot
Match: H2AXA_ARATH (Probable histone H2AXa OS=Arabidopsis thaliana GN=At1g08880 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.146e-21 Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 3 Query: 123 PKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 284 PKA+KSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSAVLEYLAAEV Sbjct: 17 PKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEV 70
BLAST of CX070536 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSJ (Probable histone H2AXb OS=Oryza sativa subsp. japonica GN=Os12g0530000 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.896e-20 Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 3 Query: 126 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 284 K SKSVSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAPVYLSAVLEYLAAEV Sbjct: 14 KGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEV 66
BLAST of CX070536 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSI (Probable histone H2AXb OS=Oryza sativa subsp. indica GN=OsI_037312 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.896e-20 Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 3 Query: 126 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 284 K SKSVSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAPVYLSAVLEYLAAEV Sbjct: 14 KGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEV 66
BLAST of CX070536 vs. ExPASy Swiss-Prot
Match: H2AX_PICAB (Histone H2AX OS=Picea abies PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.007e-20 Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 3 Query: 126 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 284 K++KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEV Sbjct: 14 KSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEV 66
BLAST of CX070536 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSJ (Probable histone H2AXa OS=Oryza sativa subsp. japonica GN=Os03g0721900 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.422e-19 Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 3 Query: 126 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 284 K +K+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAPVYLSAVLEYLAAEV Sbjct: 14 KTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEV 66
BLAST of CX070536 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSI (Probable histone H2AXa OS=Oryza sativa subsp. indica GN=OsI_012923 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.422e-19 Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 3 Query: 126 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 284 K +K+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAPVYLSAVLEYLAAEV Sbjct: 14 KTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEV 66
BLAST of CX070536 vs. ExPASy Swiss-Prot
Match: H2A7_WHEAT (Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 7.625e-19 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 3 Query: 129 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 284 A K++SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEV Sbjct: 13 AKKAISRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEV 64
BLAST of CX070536 vs. ExPASy Swiss-Prot
Match: H2A3_ARATH (Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.625e-19 Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 3 Query: 129 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 284 A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEV Sbjct: 13 AKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEV 64 The following BLAST results are available for this feature:
BLAST of CX070536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070536 ID=CX070536; Name=CX070536; organism=Citrus sinensis; type=EST; length=778bpback to top |