CX070525

Overview
NameCX070525
Unique NameCX070525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: PORB_ARATH (Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3)

HSP 1 Score: 366.311 bits (939), Expect = 1.178e-100
Identity = 180/201 (89.55%), Postives = 186/201 (92.54%), Query Frame = -1
Query:  230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832
            GHF         LK+SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG AGGLNGLNSS+MIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETG+ FASLYPGCIA+TGLFREHIPLFR LFPPFQKYITKGYVSE E+GKRLAQVVSDPSLTKSGVYWSWN  SASFENQLS+EASDVEKARKVWEISEKLVGLA
Sbjct:  201 GHFLLARLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGVTFASLYPGCIASTGLFREHIPLFRALFPPFQKYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401          
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: PORA_ARATH (Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=2 SV=2)

HSP 1 Score: 365.54 bits (937), Expect = 2.009e-100
Identity = 180/201 (89.55%), Postives = 185/201 (92.04%), Query Frame = -1
Query:  230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832
            GHF         LK SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG AGGLNGLNSS+MIDGGDF GAKAYKDSKVCNMLTMQEFHRRFHE+TGI FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE EAGKRLAQVV+DPSLTKSGVYWSWNK SASFENQLSQEASDVEKAR+VWE+SEKLVGLA
Sbjct:  205 GHFLLSRLLIDDLKNSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGDFVGAKAYKDSKVCNMLTMQEFHRRFHEDTGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSESEAGKRLAQVVADPSLTKSGVYWSWNKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 405          
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: POR_PEA (Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.624e-100
Identity = 179/201 (89.05%), Postives = 185/201 (92.04%), Query Frame = -1
Query:  230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832
            GHF         LK+SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG AGGL GLNSS+MIDGGDFDGAKAYKDSKVCNMLTMQEFHRR+HEETGI FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE+E+GKRLAQVVSDPSLTKSGVYWSWN  SASFENQLSQEASD EKARKVWE+SEKLVGLA
Sbjct:  199 GHFLLSRLLLEDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLTGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEEESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSQEASDAEKARKVWEVSEKLVGLA 399          
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: POR_DAUCA (Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 9.969e-100
Identity = 177/201 (88.06%), Postives = 186/201 (92.54%), Query Frame = -1
Query:  230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832
            GHF         L +SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG AGGLNG+NSS+MIDG +FDGAKAYKDSKVCNMLTMQEFHRR+HEETGI FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE E+GKRLAQVVS+PSLTKSGVYWSWNKDSASFENQLS+EASDVEKARKVWE+SEKLVGLA
Sbjct:  198 GHFLLSRLLLDDLNKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGMNSSAMIDGAEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEAESGKRLAQVVSEPSLTKSGVYWSWNKDSASFENQLSEEASDVEKARKVWEVSEKLVGLA 398          
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: PORB_HORVU (Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 2.456e-98
Identity = 174/201 (86.57%), Postives = 185/201 (92.04%), Query Frame = -1
Query:  230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832
            GHF         LK SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG A GLNG+ S++MIDG +FDGAKAYKDSKVCNMLTMQEFHRR+HEETG+ FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSE+EAGKRLAQVVS+PSLTKSGVYWSWNK+SASFENQLS+EASD EKARKVWE+SEKLVGLA
Sbjct:  195 GHFLLARELLEDLKASDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAAGLNGVGSAAMIDGAEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGVTFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395          
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: PORA_CUCSA (Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.715e-97
Identity = 175/201 (87.06%), Postives = 185/201 (92.04%), Query Frame = -1
Query:  230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832
            GHF         L +S YPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG AGGLNGL SS MIDGG+FDGAKAYKDSKVCNMLTMQEFH+R+HEETGI FASLYPGCIATTGLFREHIPLFR+LFPPFQK+IT+GYVSEDEAGKRLAQVVS+PSLTKSGVYWSWNK+SASFENQLSQEASD EKARKVWE+SEKLVGLA
Sbjct:  199 GHFLLSRLLLEDLNKSSYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLKSS-MIDGGEFDGAKAYKDSKVCNMLTMQEFHKRYHEETGITFASLYPGCIATTGLFREHIPLFRILFPPFQKFITQGYVSEDEAGKRLAQVVSEPSLTKSGVYWSWNKNSASFENQLSQEASDAEKARKVWELSEKLVGLA 398          
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: PORB_ORYSJ (Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.032e-96
Identity = 171/201 (85.07%), Postives = 184/201 (91.54%), Query Frame = -1
Query:  230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832
            GHF         L  SDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG A GL+G++SS+MIDGG+FDGAKAYKDSKVCNMLTMQEFHRR+H ETG+ FASLYPGCIATTGLFREH+PLFRLLFPPFQKYITKGYVSE+EAGKRLAQVVSDPSLTKSGVYWSWN +SASFENQLS+EASD EKA+KVWE+SEKLVGLA
Sbjct:  198 GHFLLARELLADLTSSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLASGLDGVSSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHGETGVTFASLYPGCIATTGLFREHVPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNNNSASFENQLSEEASDPEKAKKVWELSEKLVGLA 398          
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: PORC_ARATH (Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.490e-95
Identity = 171/201 (85.07%), Postives = 183/201 (91.04%), Query Frame = -1
Query:  230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832
            GHF         LK+SDYPSKR+IIVGSITGNTNTLAGNVPPKANLGDLRG A GLNG NSS MIDGG+FDGAKAYKDSKVCNMLTMQE HRR+HEETG+ FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSE+EAGKRLAQVVSDPSL KSGVYWSWN +S+SFENQLS+EASD EKA+K+WE+SEKLVGLA
Sbjct:  202 GHFLLSRLLLDDLKKSDYPSKRMIIVGSITGNTNTLAGNVPPKANLGDLRGLASGLNGQNSS-MIDGGEFDGAKAYKDSKVCNMLTMQELHRRYHEETGVTFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLGKSGVYWSWNNNSSSFENQLSKEASDAEKAKKLWEVSEKLVGLA 401          
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: PORA_ORYSJ (Protochlorophyllide reductase A, chloroplastic OS=Oryza sativa subsp. japonica GN=PORA PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.068e-93
Identity = 167/201 (83.08%), Postives = 181/201 (90.05%), Query Frame = -1
Query:  233 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGD-FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGL 832
            GHF         LK+SDYPS+RLII+GSITGNTNTLAGNVPPKA LGDLRG AGGL G N S+MIDG + FDGAKAYKDSK+CNMLTMQEFHRRFHEETGI FASLYPGCIATTGLFREHIPLFRLLFPPFQ+++TKG+VSE E+GKRLAQVV DPSLTKSGVYWSWNKDSASFENQLSQEASD EKARK+W++SEKLVGL
Sbjct:  186 GHFLLARLMLDDLKKSDYPSRRLIILGSITGNTNTLAGNVPPKAGLGDLRGLAGGLRGQNGSAMIDGAESFDGAKAYKDSKICNMLTMQEFHRRFHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQRFVTKGFVSEAESGKRLAQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKLWDLSEKLVGL 386          
BLAST of CX070525 vs. ExPASy Swiss-Prot
Match: POR_AVESA (Protochlorophyllide reductase (Fragment) OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 2.013e-92
Identity = 165/202 (81.68%), Postives = 181/202 (89.60%), Query Frame = -1
Query:  230 GHFXXXXXXXXXLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGFAGGLNGLNSSSMIDGGD-FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 832
            GHF         L++SDYPS+RL+IVGSITGN NTLAGNVPPKANLGDLRG AGGL G + S+MIDG + FDGAKAYKDSKVCNMLTMQEFHRR+HE+TGI F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV +PSLTKSGVYWSWNKDSASFENQLSQEASD EKARKVWE+SEKLVGLA
Sbjct:  112 GHFLLARLLLEDLQKSDYPSRRLVIVGSITGNDNTLAGNVPPKANLGDLRGLAGGLTGASGSAMIDGDESFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGITFSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVGEPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 313          
The following BLAST results are available for this feature:
BLAST of CX070525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PORB_ARATH1.178e-10089.55Protochlorophyllide reductase B, chloroplastic OS=... [more]
PORA_ARATH2.009e-10089.55Protochlorophyllide reductase A, chloroplastic OS=... [more]
POR_PEA2.624e-10089.05Protochlorophyllide reductase, chloroplastic OS=Pi... [more]
POR_DAUCA9.969e-10088.06Protochlorophyllide reductase, chloroplastic OS=Da... [more]
PORB_HORVU2.456e-9886.57Protochlorophyllide reductase B, chloroplastic OS=... [more]
PORA_CUCSA2.715e-9787.06Protochlorophyllide reductase, chloroplastic OS=Cu... [more]
PORB_ORYSJ1.032e-9685.07Protochlorophyllide reductase B, chloroplastic OS=... [more]
PORC_ARATH1.490e-9585.07Protochlorophyllide reductase C, chloroplastic OS=... [more]
PORA_ORYSJ1.068e-9383.08Protochlorophyllide reductase A, chloroplastic OS=... [more]
POR_AVESA2.013e-9281.68Protochlorophyllide reductase (Fragment) OS=Avena ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17C11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17C11-E21-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070525 ID=CX070525; Name=CX070525; organism=Citrus sinensis; type=EST; length=832bp
TTTTTTGAAGCCAAAATGTTTCTCTTTTCATTTCATATTAGACTCTGAAA
TAACTACCACTTTGCAACAAGAGTGAGTGATTTATTGACATTTTTTTTCC
ACAAGCCATCTACATCTACAATTGAAAAGCTGACCACAATTCCAAACTCC
GCTACCTAACAAACCTTCAAGCTCATAAAACCCTCCCGTAACATAAACTG
GTAGATCTGAATCTCCAGGTTTTGAATTAGGCCAAACCAACAAGTTTCTC
ACTTATCTCCCAGACTTTACGTGCCTTCTCAACGTCACTAGCTTCCTGAG
ACAACTGATTCTCAAATGAAGCTGAGTCCTTGTTCCAGCTCCAGTAAACA
CCTGATTTTGTCAAGCTTGGATCGCTCACAACCTGAGCAAGTCTTTTTCC
AGCTTCATCTTCAGAGACATAACCCTTGGTGATGTACTTTTGGAATGGGG
GGAAGAGAAGTCTGAACAAGGGAATGTGCTCCCTGAACAAGCCTGTTGTG
GCAATGCAGCCAGGGTAAAGGGAAGCGAATGCGATGCCAGTTTCCTCGTG
GAACCGCCTGTGAAACTCTTGCATGGTAAGCATGTTGCAGACTTTGCTGT
CCTTGTAGGCCTTGGCACCGTCAAAATCTCCACCGTCAATCATGGATGAG
CTGTTTAGCCCATTTAAGCCTCCAGCAAATCCCCTTAAGTCCCCAAGGTT
GGCCTTAGGAGGTACATTACCAGCCAAGGTATTTGTGTTTCCTGTGATTG
AGCCAACGATGATGAGACGCTTTGATGGGTAATCAGATTGCTTCAAGTCA
TCAAGCAACAGCCGTGAAAGGAGGAAGTGACC
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