CX070471

Overview
NameCX070471
Unique NameCX070471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070471 vs. ExPASy Swiss-Prot
Match: RL71_ARATH (60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.289e-74
Identity = 144/249 (57.83%), Postives = 184/249 (73.90%), Query Frame = 2
Query:    5 EAAQQPLAFVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLL-GKKQPFKDGGEAGNREEEINELISKMN 748
            E   + L ++ E VLKKRK+ + LA  RK QLELG  G     KK KV DIKRPE F+ ++R +E+D+IRMKQR KR K      KS L+FIIRIQG +DMHPKTK+IL NL+L+ +F+GVF +A D + + L KV+PYVTYGYPN  +VK+LIYKKG   ++   +PLTDNNIIEQ LG++ I+ IED+V+EIA VG HF+EV+ FLGPL LNKP   +L  KKQ F +GG+ GNRE++IN+LISKMN
Sbjct:    3 EEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSG----KKKKKVSDIKRPEDFVHEFRAKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHRKKQVFSEGGDTGNREDKINDLISKMN 247          
BLAST of CX070471 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.908e-66
Identity = 128/239 (53.56%), Postives = 170/239 (71.13%), Query Frame = 2
Query:   32 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 748
            V E+VLKKRK  E  AL +K  +E  K    +KN +++    KR EQ+ K+Y ++E +LI +K+  K        P++KLLFIIRI+G + + PKTKKIL  LRLR+IF+GVF++ N   + +L++VEPYVTYG+PNL +VKELIYK+GY  ++ QRI LTDN+I+EQ LGK+GIIC ED++HEI  VGPHFKE  NFL P  L  P GGL  K+  + +GG+AGNRE  INELI +MN
Sbjct:    8 VPESVLKKRKREEEWALEKKQNVEAAK----KKNAENRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242          
BLAST of CX070471 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.087e-65
Identity = 123/239 (51.46%), Postives = 170/239 (71.13%), Query Frame = 2
Query:   32 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 748
            V E+VLKKRK  E  AL +K +LE  K  + +K K        R +Q+ K+Y+++E +LI++K+  K        P++KLLFIIRI+G + + PKTKKIL  LRLR+IF+GVF++ N   + +L++VEPYVTYGYPNL +VKELIYK+G+  ++ QR  LTDN+I++Q LGK+GIIC+ED++HEI  VGPHFKE  NFL P  L  P GG+  K+  + +GG+AGNRE  INEL+ +MN
Sbjct:   10 VPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLI----FNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244          
BLAST of CX070471 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.693e-64
Identity = 124/239 (51.88%), Postives = 170/239 (71.13%), Query Frame = 2
Query:   32 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 748
            V E+VLKK K  E  AL +K +    K    +K+ +++    KR EQ+ K+Y +++ +LIR+K+  K        P++KLLFIIRI+G + + PKTKKIL  LRLR+IF+GVF++ N   + +L++VEPYVTYGYPNL +VKELIYK+GY  ++ QRI LTDN+I++Q LGK+GIIC+ED++HEI  VGPHFKE  NFL P  L  P GGL  K+  + +GG+AGNRE  INEL+ +MN
Sbjct:    8 VPESVLKKIKRQEEWALAKKDEAVAAK----KKSVEARKLIFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242          
BLAST of CX070471 vs. ExPASy Swiss-Prot
Match: RL7_NEUCR (60S ribosomal protein L7 OS=Neurospora crassa GN=rpl-7 PE=3 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 2.608e-59
Identity = 119/240 (49.58%), Postives = 165/240 (68.75%), Query Frame = 2
Query:   32 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKK-QPFKDGGEAGNREEEINELISKMN 748
            V ET+LKKRKS E     R+A++E  K      NK+ +    KR E ++K+YRD E + IR+++  K+        ++KL+F+IRI+G + + PK +KIL  LRL +I +GVFVR      E+++ VEP+V YGYPNL +VKELIYK+GY  V++QR+ LTDN+IIE+ LGKYGIIC+ED++HEI  VGP+FK+  NFL P  L+ P GG   +K + F +GG+ GNREE IN LI +MN
Sbjct:   13 VPETLLKKRKSQEKARAERQAEIEKKKAA----NKEKRAVIFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEIYTVGPNFKQASNFLWPFKLSNPTGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248          
BLAST of CX070471 vs. ExPASy Swiss-Prot
Match: RL7_CAEEL (60S ribosomal protein L7 OS=Caenorhabditis elegans GN=rpl-7 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.767e-58
Identity = 112/238 (47.06%), Postives = 159/238 (66.81%), Query Frame = 2
Query:   32 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKM 745
            V ETVLK+RK   A A T+ AQ    K     KNK+ K +  KR E+++++YR+ + + +R+K+  +         + K+ F++RI+G + +HPK +K L  LRLR+I +GVFV+ N   L +L+ +EPYV +GYPN   + +L+YK+GYA VD  R+P+TDN I+EQ+LGK+ IIC+ED+ HEIA VGPHFKE  NFL P  LN P GG   K   F +GG+ GNRE++IN L+ KM
Sbjct:   10 VPETVLKRRKQ-RADARTKAAQ---HKVTVAAKNKEKKTQYFKRAEKYVQEYRNAQKEGLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFKEATNFLWPFKLNNPTGGWTKKTNHFVEGGDFGNREDQINNLLRKM 243          
BLAST of CX070471 vs. ExPASy Swiss-Prot
Match: RL7_DICDI (60S ribosomal protein L7 OS=Dictyostelium discoideum GN=rpl7 PE=1 SV=3)

HSP 1 Score: 220.32 bits (560), Expect = 9.277e-57
Identity = 110/241 (45.64%), Postives = 160/241 (66.39%), Query Frame = 2
Query:   32 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDI--KRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 748
            V E++LKKR      A ++K  +++ K G  Q+ + S++  +  KR E+++ +Y   E + IR+ +  K S      P +K+ F+IRI+G + + PK +K+L  LRL ++ +GVFV+ N   + +L+ VEPYV YG+PNL ++KELIYK+G+  +D QRIPLT N+++E+ LGK+GIIC+EDI+HEI   G HFK+V N L P  LN P GG   KK PF  GG+AGNRE  IN LI +MN
Sbjct:   12 VPESILKKR------ATSQKKAVDVAKLGRAQQLRNSRLNSVYFKRAEKYVSEYHKTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKVLKLLRLLQLNNGVFVKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQRIPLTSNDMVEKQLGKFGIICVEDIIHEITTCGKHFKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLINNLIHRMN 246          
BLAST of CX070471 vs. ExPASy Swiss-Prot
Match: RL7_YARLI (60S ribosomal protein L7 OS=Yarrowia lipolytica GN=RPL7 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.699e-56
Identity = 113/242 (46.69%), Postives = 161/242 (66.53%), Query Frame = 2
Query:   32 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFK---DGGEAGNREEEINELISKMN 748
            V ET+LKKRK+ + +   ++A     K  + +K+K        R E+++K+YR+ E + IR+++  K +       + KL+F+IRI+G S M PK +K+L  LRL +I +GVFVR      E+L+ VEPY+ +GYPNLA+V++L+YK+GY  V++QRIPL+DN IIE+ LGKYGIIC+ED++HEI  VGP FK+  NFL P  L+ P GG  G ++ FK   +GG  GNREE IN LI   N
Sbjct:   14 VPETLLKKRKNADQIRAAKEAAAAEKKAANAEKDKVI----FSRAEKYVKEYREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTVGPAFKQASNFLWPFKLSNPSGG-WGVRRKFKHYIEGGSTGNREENINALIKAQN 250          
BLAST of CX070471 vs. ExPASy Swiss-Prot
Match: RL7_BOVIN (60S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.386e-52
Identity = 105/248 (42.34%), Postives = 157/248 (63.31%), Query Frame = 2
Query:    5 EAAQQPLAFVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 748
            E  ++ +  V ET+ KKRK+   L + R  +    K+      K  +    ++ + + K+YR      IRM +  +++       + KL F+IRI+G + + PK +K+L  LRLR+IF+G FV+ N   + +L+ VEPY+ +GYPNL +V ELIYK+GY  ++++RI LTDN +I ++LGKYGIIC+ED++HEI  VG  FKE  NFL P  L+ P GG+  K   F +GG+AGNRE++IN LI +MN
Sbjct:    5 EEKKKKVPAVPETLKKKRKNFAELKIKRLRK----KFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248          
BLAST of CX070471 vs. ExPASy Swiss-Prot
Match: RL7_MACFA (60S ribosomal protein L7 OS=Macaca fascicularis GN=RPL7 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.088e-52
Identity = 103/239 (43.10%), Postives = 153/239 (64.02%), Query Frame = 2
Query:   32 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 748
            V ET+ KKR++   L + R  +    K+      K  +    ++ + + K+YR      IRM +  +++       + KL F+IRI+G + + PK +K+L  LRLR+IF+G FV+ N   + +L+ VEPY+ +GYPNL +V ELIYK+GY  ++++RI LTDN +I ++LGKYGIIC+ED++HEI  VG  FKE  NFL P  L+ P GG+  K   F +GG+AGNRE++IN LI +MN
Sbjct:   13 VPETLKKKRRNFAELKIKRLRK----KFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEICTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 247          
The following BLAST results are available for this feature:
BLAST of CX070471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
RL71_ARATH1.289e-7457.8360S ribosomal protein L7-1 OS=Arabidopsis thaliana... [more]
RL72_ARATH4.908e-6653.5660S ribosomal protein L7-2 OS=Arabidopsis thaliana... [more]
RL74_ARATH7.087e-6551.4660S ribosomal protein L7-4 OS=Arabidopsis thaliana... [more]
RL73_ARATH2.693e-6451.8860S ribosomal protein L7-3 OS=Arabidopsis thaliana... [more]
RL7_NEUCR2.608e-5949.5860S ribosomal protein L7 OS=Neurospora crassa GN=r... [more]
RL7_CAEEL3.767e-5847.0660S ribosomal protein L7 OS=Caenorhabditis elegans... [more]
RL7_DICDI9.277e-5745.6460S ribosomal protein L7 OS=Dictyostelium discoide... [more]
RL7_YARLI2.699e-5646.6960S ribosomal protein L7 OS=Yarrowia lipolytica GN... [more]
RL7_BOVIN1.386e-5242.3460S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=... [more]
RL7_MACFA3.088e-5243.1060S ribosomal protein L7 OS=Macaca fascicularis GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17A02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17A02-A3-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070471 ID=CX070471; Name=CX070471; organism=Citrus sinensis; type=EST; length=780bp
GGAAGAAGCGGCACAGCAACCGTTAGCTTTTGTGGCGGAAACGGTGCTGA
AGAAAAGAAAAAGCACCGAGGCTTTGGCGCTGACGAGGAAAGCCCAGTTG
GAATTGGGAAAGTATGGCCATGGACAGAAGAACAAGAAGAGCAAAGTTGA
GGATATCAAAAGACCCGAGCAATTTATCAAACAGTATAGGGACCAGGAAT
TGGACCTTATCCGAATGAAACAAAGAGGGAAAAGGTCGAAAAAAGTGATC
GGGAAGCCAAAATCTAAGTTGCTTTTTATTATACGCATACAAGGCACAAG
TGATATGCACCCTAAGACTAAGAAGATTCTCTACAACCTTAGATTGAGGA
GAATTTTCAGTGGTGTCTTTGTCAGGGCTAATGATGGTATGTTAGAAGTG
CTGCAAAAGGTGGAGCCATATGTCACATATGGATATCCTAATCTTGCAAA
TGTGAAGGAGCTAATTTACAAGAAGGGTTATGCAACTGTAGATAGGCAAA
GAATTCCTCTCACAGACAATAACATTATTGAACAGACGTTGGGGAAATAT
GGCATTATATGCATTGAGGATATAGTACATGAAATAGCCAATGTTGGTCC
TCATTTTAAAGAGGTCATCAACTTTCTGGGTCCTTTAACACTAAACAAGC
CTGAAGGAGGATTGCTAGGGAAGAAACAACCATTCAAGGACGGTGGAGAA
GCTGGAAACCGTGAGGAAGAAATCAACGAATTAATCAGTAAGATGAATTA
GGAGTTATGATTCCATGAGAAGCAAATGAT
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