CX070470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX070470 vs. ExPASy Swiss-Prot
Match: RL71_ARATH (60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.995e-66 Identity = 125/206 (60.68%), Postives = 160/206 (77.67%), Query Frame = -2 Query: 245 KKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLL-GKKQPFKDGGEAGNREEEINELISKMN 859 KK KV DIKRPE F+ ++R +E+D+IRMKQR KR K KS L+FIIRIQG +DMHPKTK+IL NL+L+ +F+GVF +A D + + L KV+PYVTYGYPN +VK+LIYKKG ++ +PLTDNNIIEQ LG++ I+ IED+V+EIA VG HF+EV+ FLGPL LNKP +L KKQ F +GG+ GNRE++IN+LISKMN Sbjct: 42 KKKKVSDIKRPEDFVHEFRAKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHRKKQVFSEGGDTGNREDKINDLISKMN 247
BLAST of CX070470 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.341e-61 Identity = 115/209 (55.02%), Postives = 153/209 (73.21%), Query Frame = -2 Query: 245 KKSKVED----IKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 859 KK VE KR EQ+ K+Y +++ +LIR+K+ K P++KLLFIIRI+G + + PKTKKIL LRLR+IF+GVF++ N + +L++VEPYVTYGYPNL +VKELIYK+GY ++ QRI LTDN+I++Q LGK+GIIC+ED++HEI VGPHFKE NFL P L P GGL K+ + +GG+AGNRE INEL+ +MN Sbjct: 34 KKKSVEARKLIFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242
BLAST of CX070470 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.759e-60 Identity = 115/209 (55.02%), Postives = 151/209 (72.25%), Query Frame = -2 Query: 245 KKSKVED----IKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 859 KK E+ KR EQ+ K+Y ++E +LI +K+ K P++KLLFIIRI+G + + PKTKKIL LRLR+IF+GVF++ N + +L++VEPYVTYG+PNL +VKELIYK+GY ++ QRI LTDN+I+EQ LGK+GIIC ED++HEI VGPHFKE NFL P L P GGL K+ + +GG+AGNRE INELI +MN Sbjct: 34 KKKNAENRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242
BLAST of CX070470 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.999e-58 Identity = 110/209 (52.63%), Postives = 152/209 (72.73%), Query Frame = -2 Query: 245 KKSKVEDIK----RPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 859 KK E K R +Q+ K+Y+++E +LI++K+ K P++KLLFIIRI+G + + PKTKKIL LRLR+IF+GVF++ N + +L++VEPYVTYGYPNL +VKELIYK+G+ ++ QR LTDN+I++Q LGK+GIIC+ED++HEI VGPHFKE NFL P L P GG+ K+ + +GG+AGNRE INEL+ +MN Sbjct: 36 KKQNAEKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244
BLAST of CX070470 vs. ExPASy Swiss-Prot
Match: RL7_CAEEL (60S ribosomal protein L7 OS=Caenorhabditis elegans GN=rpl-7 PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.341e-54 Identity = 97/205 (47.32%), Postives = 142/205 (69.27%), Query Frame = -2 Query: 248 NKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKM 862 NK+ K + KR E+++++YR+ + + +R+K+ + + K+ F++RI+G + +HPK +K L LRLR+I +GVFV+ N L +L+ +EPYV +GYPN + +L+YK+GYA VD R+P+TDN I+EQ+LGK+ IIC+ED+ HEIA VGPHFKE NFL P LN P GG K F +GG+ GNRE++IN L+ KM Sbjct: 39 NKEKKTQYFKRAEKYVQEYRNAQKEGLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFKEATNFLWPFKLNNPTGGWTKKTNHFVEGGDFGNREDQINNLLRKM 243
BLAST of CX070470 vs. ExPASy Swiss-Prot
Match: RL7_NEUCR (60S ribosomal protein L7 OS=Neurospora crassa GN=rpl-7 PE=3 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 3.902e-54 Identity = 105/207 (50.72%), Postives = 147/207 (71.01%), Query Frame = -2 Query: 245 NKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKK-QPFKDGGEAGNREEEINELISKMN 862 NK+ + KR E ++K+YRD E + IR+++ K+ ++KL+F+IRI+G + + PK +KIL LRL +I +GVFVR E+++ VEP+V YGYPNL +VKELIYK+GY V++QR+ LTDN+IIE+ LGKYGIIC+ED++HEI VGP+FK+ NFL P L+ P GG +K + F +GG+ GNREE IN LI +MN Sbjct: 42 NKEKRAVIFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEIYTVGPNFKQASNFLWPFKLSNPTGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248
BLAST of CX070470 vs. ExPASy Swiss-Prot
Match: RL7_DICDI (60S ribosomal protein L7 OS=Dictyostelium discoideum GN=rpl7 PE=1 SV=3) HSP 1 Score: 205.682 bits (522), Expect = 2.796e-52 Identity = 98/197 (49.75%), Postives = 136/197 (69.04%), Query Frame = -2 Query: 245 KRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 835 KR E+++ +Y E + IR+ + K S P +K+ F+IRI+G + + PK +K+L LRL ++ +GVFV+ N + +L+ VEPYV YG+PNL ++KELIYK+G+ +D QRIPLT N+++E+ LGK+GIIC+EDI+HEI G HFK+V N L P LN P GG KK PF GG+AGNRE IN LI +MN Sbjct: 50 KRAEKYVSEYHKTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKVLKLLRLLQLNNGVFVKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQRIPLTSNDMVEKQLGKFGIICVEDIIHEITTCGKHFKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLINNLIHRMN 246
BLAST of CX070470 vs. ExPASy Swiss-Prot
Match: RL7_YARLI (60S ribosomal protein L7 OS=Yarrowia lipolytica GN=RPL7 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 6.229e-52 Identity = 101/199 (50.75%), Postives = 140/199 (70.35%), Query Frame = -2 Query: 245 RPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFK---DGGEAGNREEEINELISKMN 832 R E+++K+YR+ E + IR+++ K + + KL+F+IRI+G S M PK +K+L LRL +I +GVFVR E+L+ VEPY+ +GYPNLA+V++L+YK+GY V++QRIPL+DN IIE+ LGKYGIIC+ED++HEI VGP FK+ NFL P L+ P GG G ++ FK +GG GNREE IN LI N Sbjct: 53 RAEKYVKEYREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTVGPAFKQASNFLWPFKLSNPSGG-WGVRRKFKHYIEGGSTGNREENINALIKAQN 250
BLAST of CX070470 vs. ExPASy Swiss-Prot
Match: RL7_MACFA (60S ribosomal protein L7 OS=Macaca fascicularis GN=RPL7 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.464e-50 Identity = 93/197 (47.21%), Postives = 136/197 (69.04%), Query Frame = -2 Query: 245 KRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 835 ++ + + K+YR IRM + +++ + KL F+IRI+G + + PK +K+L LRLR+IF+G FV+ N + +L+ VEPY+ +GYPNL +V ELIYK+GY ++++RI LTDN +I ++LGKYGIIC+ED++HEI VG FKE NFL P L+ P GG+ K F +GG+AGNRE++IN LI +MN Sbjct: 51 EKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEICTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 247
BLAST of CX070470 vs. ExPASy Swiss-Prot
Match: RL7_PONAB (60S ribosomal protein L7 OS=Pongo abelii GN=RPL7 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.615e-50 Identity = 93/197 (47.21%), Postives = 136/197 (69.04%), Query Frame = -2 Query: 245 KRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVGPHFKEVINFLGPLTLNKPEGGLLGKKQPFKDGGEAGNREEEINELISKMN 835 ++ + + K+YR IRM + +++ + KL F+IRI+G + + PK +K+L LRLR+IF+G FV+ N + +L+ VEPY+ +GYPNL +V ELIYK+GY ++++RI LTDN +I ++LGKYGIIC+ED++HEI VG FKE NFL P L+ P GG+ K F +GG+AGNRE++IN LI +MN Sbjct: 51 EKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 247 The following BLAST results are available for this feature:
BLAST of CX070470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070470 ID=CX070470; Name=CX070470; organism=Citrus sinensis; type=EST; length=863bpback to top |