DR404400

Overview
NameDR404400
Unique NameDR404400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6202 contig Csv1_Contig6202:1..760. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_PRUAR (Adenylate kinase OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.324e-78
Identity = 142/208 (68.27%), Postives = 165/208 (79.33%), Query Frame = 2
Query:   26 MWRRAAXXXXXXXXXXXXXRNHQTAYNLKIWESFTTE--IPTQVKGGKGPFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKKFLIDGFPRSEENRAAFERIMGAEPDIVLFFDCPEEEMVNRVLNRNEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            MWRR                N Q A   KIWE+FT+E  IPT  KG   PF+ FVLGGPGSGKGTQCAKIV+ +G TH+SAG+LLRREIAS S YG+ IL+TI+EGKIVPS+VTV LIQKEMESSD+ KFLIDGFPRSEENR AFE+ +GAEPD+VLFFDCPE+EMV RVLNRN+GRVDDNIDT++KRL++F  LN PVINYY++ GK
Sbjct:    1 MWRRVTSVSHLFSHSKSTKFN-QGASTFKIWETFTSESEIPTPSKGS--PFVTFVLGGPGSGKGTQCAKIVEAFGFTHVSAGDLLRREIASGSAYGSVILSTIREGKIVPSQVTVELIQKEMESSDNYKFLIDGFPRSEENRKAFEQTIGAEPDVVLFFDCPEQEMVKRVLNRNQGRVDDNIDTIKKRLEIFDELNWPVINYYSQRGK 205          

HSP 2 Score: 35.4242 bits (80), Expect = 1.324e-78
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  673 NAVGTVDEIFEQVRAVFAAL 732
            NAVGTVDEIFE+VR +FA L
Sbjct:  210 NAVGTVDEIFEKVRPIFAPL 229          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: UMPK_ARATH (Uridylate kinase OS=Arabidopsis thaliana GN=PYR6 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.604e-58
Identity = 109/162 (67.28%), Postives = 130/162 (80.25%), Query Frame = 2
Query:  158 GKGPFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKKFLIDGFPRSEENRAAFERIMGAEPDIVLFFDCPEEEMVNRVLNRNEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            GK P + FVLGGPGSGKGTQCA IV++YG THLSAG+LLR EI S SE GT I N IKEGKIVPSEVT+ L+QK ++ + + KFLIDGFPR+EENRAAFE++   EP  VLFFDCPEEEM  R+L RN+GR DDNI+T+RKR +VF   +LPVI+YY  +GK
Sbjct:   11 GKKPTVIFVLGGPGSGKGTQCAYIVEHYGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGK 172          

HSP 2 Score: 22.7126 bits (47), Expect = 2.604e-58
Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  673 NAVGTVDEIFEQVRAVFA 726
            NA   ++ +FE+V+A+F+
Sbjct:  177 NAAKPIEAVFEEVKAIFS 194          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KCY_XENTR (UMP-CMP kinase OS=Xenopus tropicalis GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 8.456e-39
Identity = 83/169 (49.11%), Postives = 115/169 (68.05%), Query Frame = 2
Query:  167 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESS-----DSKKFLIDGFPRSEENRAAFERIMGAEPDI--VLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            PF+ FVLGGPG+GKGTQC +IV+ YG THLSAG+LLR E    +S+YG  I + I++G+IVP E+T+SL+Q+ ME +     +  KFLIDGFPR+E+N   +ER M  + D+  VLFFDC  E  + R L R  + GR DDN +++ KR+Q +     P+I+ Y + GK
Sbjct:    3 PFVVFVLGGPGAGKGTQCERIVQKYGYTHLSAGDLLRDERKKPDSQYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGFPRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNRESLEKRIQTYLQSTRPIIDLYEKTGK 171          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KCY_DICDI (Cytidylate kinase OS=Dictyostelium discoideum GN=pyrK PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.104e-38
Identity = 83/163 (50.92%), Postives = 110/163 (67.48%), Query Frame = 2
Query:  167 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKKFLIDGFPRSEENRAAFERIMG--AEPDIVLFFDCPEEEMVNRVLNRNE--GRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            P + FVLGGPGSGKGTQCA IV+++G  HLSAG+LLR+E  S S+ G  I   IK G+IVPS VTV L++  ++++  K FL+DGFPR+EEN  ++E  M    +   VLFFDCPEE M  R+L R E  GR DDNI++++KR   F      VI++Y +  K
Sbjct:    7 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDK 169          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KCY_XENLA (UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.442e-38
Identity = 83/169 (49.11%), Postives = 114/169 (67.46%), Query Frame = 2
Query:  167 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYGTTILNTIKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEENRAAFERIMGAEPDI--VLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            P + FVLGGPG+GKGTQC +IV+ YG THLSAG+LLR E    +S+YG  I + I++GKIVP E+T+SL+Q+ ME      ++  KFLIDGFPR+E+N   +ER M  + D+  VLFFDC  E  + R L R  + GR DDN +++ KR+Q +     P+I+ Y + GK
Sbjct:    3 PLVVFVLGGPGAGKGTQCERIVQKYGYTHLSAGDLLRDERKKPDSQYGELIESYIRDGKIVPVEITISLLQRAMERTMAFDANKHKFLIDGFPRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNRESLEKRIQTYLQSTRPIIDLYEKRGK 171          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: UMPK_YEAST (Uridylate kinase OS=Saccharomyces cerevisiae GN=URA6 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.197e-38
Identity = 80/165 (48.48%), Postives = 113/165 (68.48%), Query Frame = 2
Query:  173 ICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIA-SNSEYGTTILNTIKEGKIVPSEVTVSLIQKEME---SSDSKKFLIDGFPRSEENRAAFERIMGAEPDIVLFFDCPEEEMVNRVLNRNE--GRVDDNIDTVRKRLQVFKALNLPVINYYAREGKAL 649
            + FVLGGPG+GKGTQC K+VK+Y   HLSAG+LLR E   + S+YG  I N IKEG+IVP E+T++L++  +     ++  KFLIDGFPR  +   +FER +  E   +LFFDCPE+ M+ R+L R +  GR DDNI++++KR   FK  ++PVI Y+  + K +
Sbjct:   18 VIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDI-VESKFILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVV 181          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KCY_RAT (UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.197e-38
Identity = 83/169 (49.11%), Postives = 115/169 (68.05%), Query Frame = 2
Query:  167 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYGTTILNTIKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEENRAAFERIMGAEPDI--VLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            P + FVLGGPG+GKGTQCA+IV+ YG THLSAGELLR E  + +S+YG  I   IKEGKIVP E+T+SL+++EM+     ++   KFLIDGFPR+++N   + + M  + D+  VLFFDC  E  ++R L R  + GR DDN +++ KR+Q +     P+I+ Y   GK
Sbjct:    3 PLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIDRCLERGKSSGRSDDNRESLEKRIQTYLESTKPIIDLYEEMGK 171          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KCY_MOUSE (UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.481e-38
Identity = 83/169 (49.11%), Postives = 114/169 (67.46%), Query Frame = 2
Query:  167 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYGTTILNTIKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEENRAAFERIMGAEPDI--VLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            P + FVLGGPG+GKGTQCA+IV+ YG THLSAGELLR E  + +S+YG  I   IKEGKIVP E+T+SL+++EM+     ++   KFLIDGFPR+++N   + + M  + D+  VLFFDC  E  + R L R  + GR DDN +++ KR+Q +     P+I+ Y   GK
Sbjct:    3 PLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLESTKPIIDLYEEMGK 171          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KCY_HUMAN (UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 5.481e-38
Identity = 83/169 (49.11%), Postives = 114/169 (67.46%), Query Frame = 2
Query:  167 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYGTTILNTIKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEENRAAFERIMGAEPDI--VLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            P + FVLGGPG+GKGTQCA+IV+ YG THLSAGELLR E  + +S+YG  I   IKEGKIVP E+T+SL+++EM+     ++   KFLIDGFPR+++N   + + M  + D+  VLFFDC  E  + R L R  + GR DDN +++ KR+Q +     P+I+ Y   GK
Sbjct:    3 PLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGK 171          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KCY_CHICK (UMP-CMP kinase OS=Gallus gallus GN=CMPK1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.595e-37
Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 2
Query:  167 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRRE-IASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEENRAAFERIMGAEPDI--VLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            P + FVLGGPG+GKGTQCA+IV+ YG THLSAG+LLR E     S+YG  I N IKEG+IVP E+T+SL+++ M+     +S   KFLIDGFPR+E+N   + + M  + D+  VLFFDC  E  + R L R  + GR DDN +++ KR+  +     P+I+ Y R GK
Sbjct:    3 PVVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGDLLRDERKRPGSQYGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDNLQGWNKTMDGKADVSFVLFFDCDNEICIGRCLERGKSSGRSDDNRESLEKRIHTYLQSTRPIIDLYERMGK 171          
The following BLAST results are available for this feature:
BLAST of DR404400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PRUAR1.324e-7868.27Adenylate kinase OS=Prunus armeniaca PE=2 SV=1[more]
UMPK_ARATH2.604e-5867.28Uridylate kinase OS=Arabidopsis thaliana GN=PYR6 P... [more]
KCY_XENTR8.456e-3949.11UMP-CMP kinase OS=Xenopus tropicalis GN=cmpk1 PE=2... [more]
KCY_DICDI1.104e-3850.92Cytidylate kinase OS=Dictyostelium discoideum GN=p... [more]
KCY_XENLA1.442e-3849.11UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE=2 SV=... [more]
UMPK_YEAST4.197e-3848.48Uridylate kinase OS=Saccharomyces cerevisiae GN=UR... [more]
KCY_RAT4.197e-3849.11UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 PE=1 ... [more]
KCY_MOUSE5.481e-3849.11UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1 SV=1[more]
KCY_HUMAN5.481e-3849.11UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3[more]
KCY_CHICK1.595e-3749.11UMP-CMP kinase OS=Gallus gallus GN=CMPK1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243D11 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404400 ID=DR404400; Name=DR404400; organism=Citrus sinensis; type=EST; length=761bp
GGGGAACTGGAGAGAANNNNNTACGATGTGGAGGCGCGCGGCTTCGCTTT
CTCCTTTCATCTCTTCCTCAGGATCATTGATTCGCAATCATCAGACAGCT
TACAACTTGAAGATTTGGGAATCATTTACCACGGAAATACCCACCCAGGT
AAAAGGAGGCAAGGGTCCATTCATATGTTTCGTCTTAGGTGGCCCTGGTA
GTGGAAAAGGTACGCAATGTGCAAAAATTGTGAAGAATTACGGATTGACA
CATCTAAGTGCGGGAGAGTTATTAAGGAGAGAAATAGCTTCTAACAGTGA
ATATGGCACCACAATTCTCAACACAATCAAAGAAGGAAAAATTGTCCCTT
CAGAAGTAACAGTCAGCCTGATCCAAAAGGAGATGGAATCAAGTGATAGC
AAAAAATTTCTAATTGATGGTTTTCCCCGAAGTGAGGAGAATCGTGCAGC
ATTTGAACGGATTATGGGAGCAGAACCAGATATTGTTCTTTTCTTCGATT
GCCCTGAAGAAGAGATGGTGAATCGAGTGCTGAACCGCAATGAGGGTCGA
GTTGATGATAACATTGACACAGTCCGGAAACGTCTCCAAGTGTTTAAAGC
ATTGAATCTTCCTGTTATCAATTACTATGCAAGGGAGGGGAAAGCTTTAT
ACGAAGGTTTTGCATTCNNNNCAATGCAGTGGGAACAGTAGATGAAATTT
TTGAACAAGTTCGTGCAGTTTTTGCTGCACTCAAGCTGGCGACAGAATGA
TCCTTGATTAT
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