CX070453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX070453 vs. ExPASy Swiss-Prot
Match: FCF1_PONAB (rRNA-processing protein FCF1 homolog OS=Pongo abelii GN=FCF1 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.298e-70 Identity = 128/174 (73.56%), Postives = 144/174 (82.76%), Query Frame = -3 Query: 227 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATVGGAPR 742 ++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+EKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKC+IVAT DRDLKRRIRK+PGVPIMYI+ H+Y+IER+P+ GAPR Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDY--GAPR 197
BLAST of CX070453 vs. ExPASy Swiss-Prot
Match: FCF1_HUMAN (rRNA-processing protein FCF1 homolog OS=Homo sapiens GN=FCF1 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.298e-70 Identity = 128/174 (73.56%), Postives = 144/174 (82.76%), Query Frame = -3 Query: 227 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATVGGAPR 742 ++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+EKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKC+IVAT DRDLKRRIRK+PGVPIMYI+ H+Y+IER+P+ GAPR Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDY--GAPR 197
BLAST of CX070453 vs. ExPASy Swiss-Prot
Match: FCF1_BOVIN (rRNA-processing protein FCF1 homolog OS=Bos taurus GN=FCF1 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.298e-70 Identity = 128/174 (73.56%), Postives = 144/174 (82.76%), Query Frame = -3 Query: 227 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATVGGAPR 742 ++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+EKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKC+IVAT DRDLKRRIRK+PGVPIMYI+ H+Y+IER+P+ GAPR Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDY--GAPR 197
BLAST of CX070453 vs. ExPASy Swiss-Prot
Match: FCF1_MOUSE (rRNA-processing protein FCF1 homolog OS=Mus musculus GN=Fcf1 PE=2 SV=2) HSP 1 Score: 260.381 bits (664), Expect = 9.174e-69 Identity = 125/174 (71.84%), Postives = 144/174 (82.76%), Query Frame = -3 Query: 227 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATVGGAPR 742 ++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+EKLGQK+RVALRIAKDPRF+RLPCTHKGTYADDCLV+RVTQHKC+IVAT DRDLKRRIRK+PGVPIMY++ H+Y+IER+P+ GAPR Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKFRVALRIAKDPRFDRLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYLSNHRYNIERMPDDY--GAPR 197
BLAST of CX070453 vs. ExPASy Swiss-Prot
Match: FCF1_YEAST (rRNA-processing protein FCF1 OS=Saccharomyces cerevisiae GN=FCF1 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.391e-61 Identity = 110/176 (62.50%), Postives = 141/176 (80.11%), Query Frame = -3 Query: 251 ITKRAIKNYKEDVLNPNKKDL-TKE--KMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPE 769 + KR + K+ L N++++ TKE ++ RN+P VSSALFF +N A+ PPY+VL+DTNFINFSIQ K+D+ +GMMDCL AKC P ITDCVMAELEKLG KYR+AL++A+DPR +RL C+HKGTYADDCLV RV QHKC+IVAT D LK+RIRK+PG+P+M + H Y IE+LP+ Sbjct: 12 LVKRTLNTKKDQRLKKNQENIKTKEDPELTRNIPQVSSALFFQYNQAIKPPYQVLIDTNFINFSIQKKVDIVRGMMDCLLAKCNPLITDCVMAELEKLGPKYRIALKLARDPRIKRLSCSHKGTYADDCLVHRVLQHKCYIVATNDAGLKQRIRKIPGIPLMSVGGHAYVIEKLPD 187
BLAST of CX070453 vs. ExPASy Swiss-Prot
Match: FCF1_SCHPO (rRNA-processing protein fcf1 OS=Schizosaccharomyces pombe GN=fcf1 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.579e-58 Identity = 109/177 (61.58%), Postives = 136/177 (76.84%), Query Frame = -3 Query: 257 KRAIKNYKEDVLNPNKKDLTKEK--------MPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERL 763 KR I N K+ L KKD KEK + R +P ++S LFF N +LGPPY V++DTNFINF +Q K+DL +G+M CLYAK PCI+DCVMAELEKLG +YR+ALRIAKD RFERLPCTHKGTYADDC+V+RV QHKC++VAT D++LK+RIRK+PG+PI+ + HK +ERL Sbjct: 14 KRVI-NLKDQRLQ--KKDQKKEKEKTTKNGELVREIPQMASNLFFQFNESLGPPYHVIIDTNFINFCLQQKIDLFEGLMTCLYAKTIPCISDCVMAELEKLGIRYRIALRIAKDERFERLPCTHKGTYADDCIVQRVMQHKCYLVATNDKNLKQRIRKIPGIPILSVANHKIRVERL 187
BLAST of CX070453 vs. ExPASy Swiss-Prot
Match: FCF1_DICDI (rRNA-processing protein FCF1 homolog OS=Dictyostelium discoideum GN=fcf1 PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.420e-55 Identity = 94/172 (54.65%), Postives = 133/172 (77.33%), Query Frame = -3 Query: 251 TKRAIKNYKEDVLNPNKKDLTKEKMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPE 766 T N ++ + ++D ++K+ + +S +FF++N AL PPY V++DTNFINFSI +KLD+ +MDCLYAKC P I+DCV AE+E+LG K++VAL+I+KDPRF+RL C+HKGTYADDC++ R+T H+ FIVATCD DL+RRIRK+PGVPI+Y+ KY++ER+P+ Sbjct: 20 TNPNFSNRQKQIQRSKQEDEHRKKLEEIPEDNTSHMFFSYNEALVPPYHVIIDTNFINFSISHKLDIIHSLMDCLYAKCIPYISDCVAAEIERLGSKFKVALKISKDPRFQRLTCSHKGTYADDCIINRITMHRMFIVATCDADLRRRIRKIPGVPIVYLKGKKYTVERMPD 191
BLAST of CX070453 vs. ExPASy Swiss-Prot
Match: UTP23_SCHPO (rRNA-processing protein utp23 OS=Schizosaccharomyces pombe GN=utp23 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.894e-12 Identity = 43/136 (31.62%), Postives = 72/136 (52.94%), Query Frame = -3 Query: 242 PYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTH--KGTYADDCLVERV-----TQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATV 628 PY+VLVD +F+ Q K+D++ + + P IT C + +L + + +RIAK FER C H + +C+ V +H+ ++VAT D +L++ +R VPGVP++Y+ R +E AT+ Sbjct: 25 PYQVLVDADFLKDLSQQKIDIQAALARTVQGAIKPMITQCCIRQLYSKSDELKQEIRIAKS--FERRRCGHIDEALSPSECIQSVVNINGRNKHR-YVVATQDPELRQALRSVPGVPLIYMKRSVVILEPASRATL 157
BLAST of CX070453 vs. ExPASy Swiss-Prot
Match: UTP23_BOVIN (rRNA-processing protein UTP23 homolog OS=Bos taurus GN=UTP23 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.894e-12 Identity = 41/142 (28.87%), Postives = 74/142 (52.11%), Query Frame = -3 Query: 242 FFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCL---VERVTQHKCFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATV 658 FF +N + PY++L+D F +++ ++ L + + L A+ C T CV+ ELE LG+ A IA+ + P +CL VE H F+ AT D++L +++K PG+P+M+I ++ +++ T+ Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMAETQLCTTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEDGNPHHYFL-ATQDQNLSMKVKKKPGIPLMFIIQNTIVLDKPSPKTI 155
BLAST of CX070453 vs. ExPASy Swiss-Prot
Match: UTP23_HUMAN (rRNA-processing protein UTP23 homolog OS=Homo sapiens GN=UTP23 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-11 Identity = 39/141 (27.66%), Postives = 73/141 (51.77%), Query Frame = -3 Query: 242 FFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHK--CFIVATCDRDLKRRIRKVPGVPIMYITRHKYSIERLPEATV 658 FF +N + PY++L+D F +++ ++ L + + L + C T CV+ ELE LG+ A IA+ + P +CL+ V + + VAT D++L +++K PGVP+M+I ++ +++ T+ Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVATQDQNLSVKVKKKPGVPLMFIIQNTMVLDKPSPKTI 155 The following BLAST results are available for this feature:
BLAST of CX070453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070453 ID=CX070453; Name=CX070453; organism=Citrus sinensis; type=EST; length=843bpback to top |