CX070437

Overview
NameCX070437
Unique NameCX070437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length401
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9926 contig Csv1_Contig9926:15..415. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX070437 vs. ExPASy Swiss-Prot
Match: PR4_PHAVU (Wound-induced basic protein OS=Phaseolus vulgaris GN=PR4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.811e-17
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 1 
Query:   55 MIYDVNSPLFRSFLSQKGGASDKRKMEEQRPKEQRPKTNENKPVMTE 195
            MIYDVNSPLFRSFLSQKGG+SDKRK EEQ+PKE RPK +ENKP+MTE
Sbjct:    1 MIYDVNSPLFRSFLSQKGGSSDKRKTEEQKPKEHRPKASENKPIMTE 47
The following BLAST results are available for this feature:
BLAST of CX070437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PR4_PHAVU1.811e-1785.11Wound-induced basic protein OS=Phaseolus vulgaris ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_16G05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-16G05-N10-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070437 ID=CX070437; Name=CX070437; organism=Citrus sinensis; type=EST; length=401bp
CTAGGGTTTCTTTTTCCGATACAGGAATCCTACGGTGATAATTCATAATC
AACAATGATCTACGACGTGAACTCTCCTCTCTTCCGTTCCTTCCTCAGCC
AGAAGGGCGGCGCTTCTGACAAGAGGAAAATGGAAGAGCAAAGGCCAAAA
GAACAAAGACCCAAAACAAATGAGAACAAGCCTGTCATGACAGAGTGAGA
GTTGCGTTTTGCTTGTAATGCTTCAGTGATGAGATAGAAGTAGTACGGTT
CAGTGGTCACAGTCATCCAAATGTAACTGATTCTGATTTTCCTTGGTTTA
TGGGTTTGTAGTGGTCTGTGTTTGGATTTGGATGTTTCTTGTGGAACAAA
AAATGTTTGGTAGTGCTATTATGCATTTAATATATTATTAAGGAAAAAAA
A
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