CX070403

Overview
NameCX070403
Unique NameCX070403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2224 contig Csv1_Contig2224:24..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 1.087e-107
Identity = 178/231 (77.06%), Postives = 206/231 (89.18%), Query Frame = 1
Query:   55 MAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            MA     T+++++  S ++ + ++NF +D +ITWGDGRG+I NNG LL+LSLDKASGSGFQSK+EYLFGKIDMQ+KLV GNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFT GKGDREQQF LWFDPT+DFHTYS+LWNPQRI+F VDG+PIREFKN+ES G LFPKNQPMR+YSSLWNA++WATRGGL+KTDW++APFTASYR FN  ACV  NG+SSC
Sbjct:    1 MAMISYSTIVVALLASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQSSC 231          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 6.595e-105
Identity = 172/225 (76.44%), Postives = 202/225 (89.78%), Query Frame = 1
Query:   76 TLLISIAISSLMVASAS-NFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            T L+ + +S ++ +S S NF +D +ITWGDGRG+I NNG+LL+LSLDK+SGSGFQSK+EYLFGK+ MQ+KLVPGNSAGTVT  YLKSPG+TWDEIDFEFLGN SG+PYTLHTNV+T GKGD+EQQF LWFDPTA+FHTY++LWNPQRI+F VDG+PIREFKN+ES G LFPKN+PMR+YSSLWNADDWATRGGL+KTDW++APFTASYR F   ACVWSNGKSSC
Sbjct:    4 TYLLPLFLSLIITSSVSANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSC 228          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 377.096 bits (967), Expect = 5.583e-104
Identity = 177/236 (75.00%), Postives = 199/236 (84.32%), Query Frame = 1
Query:   40 IDCSTMAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            +D ST   S  FTL +S   +      A  F  +FDITWGDGRGK+LNNG+LL+LSLD+ASGSGFQ+K EYLFGKIDMQLKLVPGNSAGTVTAYYLKS G TWDEIDFEFLGNL+GDPYT+HTNV+T GKGDREQQFHLWFDPTADFHTYSVLWNP  IVF VD  P+REFKNL+  G+ +PK QPMR+YSSLWNAD WATRGGL+KTDW++APFTASYRNF A+ACV S G+SSC
Sbjct:    1 MDRSTFILSLLFTLTVSTT-TLFSPVFAGTFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADACVSSGGRSSC 235          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 355.91 bits (912), Expect = 1.332e-97
Identity = 166/220 (75.45%), Postives = 192/220 (87.27%), Query Frame = 1
Query:   73 FTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSN 732
            FT L+  A S     SA++F  D ++ WG+GRGKILNNGQLL+LSLDK+SGSGFQSK+EYLFGKIDMQ+KLVPGNSAGTVT +YLKS GSTWDEIDFEFLGN+SGDPYTLHTNV+T GKGD+EQQFHLWFDPTA+FHTYS+LWNPQRI+  VD +PIREFKN ES GVLFPKN+PMR+Y+SLWNADDWATRGGL+KTDW++APF ASYRN   ++   SN
Sbjct:    9 FTTLLVAAFS----VSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNIKIDSKPNSN 224          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.740e-97
Identity = 159/219 (72.60%), Postives = 188/219 (85.84%), Query Frame = 1
Query:   76 TLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNA-NACVWS 729
            ++ + + +S L+V    +F QD DITWGDGRG ILNNG LL+L LD++SGSGFQSK+EYL+GK+DMQ+KLVPGNSAGTVT +YLKS G TWDEIDFEFLGN+SGDPY +HTNV+T GKGDREQQF+LWFDPTA FH YS+LWNP  IVFY+DG PIREFKNLE  GV +PKNQPMR+Y SLWNADDWATRGGL+KT+W+Q PF AS+ N+N+ NACVWS
Sbjct:   10 SISLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENACVWS 228          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 4.285e-96
Identity = 156/210 (74.29%), Postives = 185/210 (88.10%), Query Frame = 1
Query:  121 ASNFYQDFDITWGDGRGKILNN-GQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            A +F++D  I WGDGRGKIL+N G LLSLSLDK SGSGFQS  E+L+GK+++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGN+SG PYTLHTNV+T G GD+EQQFHLWFDPT DFHTY ++WNPQR++F +DG PIREFKN E+ GV FPK+QPMR+Y+SLW A+ WATRGGL KTDW++APFTA YRN+N +ACVWSNGKSSC
Sbjct:   26 AGSFHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGKSSC 235          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 4.010e-94
Identity = 158/211 (74.88%), Postives = 179/211 (84.83%), Query Frame = 1
Query:   79 LLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNA 711
            +L+ I +S+++   A +FYQDFD+TWG  R KI N GQLLSLSLDK SGSGF+SK EYLFG+IDMQLKLV GNSAGTVTAYYL S G T DEIDFEFLGNLSGDPY LHTN+FT GKG+REQQF+LWFDPT +FHTYS++W PQ I+F VD +PIR FKN E  GV FPKNQPMRIYSSLWNADDWATRGGL+KTDW++APFTA YRNF A
Sbjct:   15 MLVGIVVSTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKA 225          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 8.934e-94
Identity = 158/229 (69.00%), Postives = 188/229 (82.10%), Query Frame = 1
Query:   67 KNFTLLISIAISSLMVAS-ASNFYQDFDITWGDGRGKILNN-GQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            K+FT LI    ++  ++  A +F++D  I WGDGRGKI +N G+LLSLSLDK+SGSGFQS  E+L+GK ++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGN+SG PYTLHTNV+T G GD+EQQFHLWFDPTA+FHTY + WNPQRI+F VDG PIREF N ES GV FP  QPMR+Y+SLW A+ WATRGGL KTDW++APFTA YRN+N   CVW NGKS C
Sbjct:    2 KSFTFLILFLFAAQSISVYAGSFHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGKSVC 230          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.167e-93
Identity = 160/237 (67.51%), Postives = 191/237 (80.59%), Query Frame = 1
Query:   40 IDCSTMAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILN-NGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            + C T   S  F ++   A  S+ V + S F++D  I WGDGRGK+ + +G+LLSLSLDK+SGSGFQS  E+L+GK ++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGNLSG PYTLHTNV+T G GD+EQQFHLWFDPT +FHTY + WNPQRI+F VDG PIREFKN ES GV FP  QPMR+Y+SLW A+ WATRGGL KTDW++APFTA YRN+N   CVW+NGKSSC
Sbjct:    3 LSCGT---SFAFLIMFLFAAQSMHVYAGS-FHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSC 235          
BLAST of CX070403 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.524e-93
Identity = 161/237 (67.93%), Postives = 193/237 (81.43%), Query Frame = 1
Query:   40 IDCSTMAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILN-NGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWSNGKSSC 747
            + C T   S  F LL  +A  S+ V + S F++D  I WGDGRGKI + +G+LLSLSLDK+SGSGFQS  E+L+GK ++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGN+SG PYTLHTNV+T G GD+EQQFHLWFDPT +FHTY + WNPQRI+F VDG PIREFKN E+ GV FP  QPMR+Y+SLW A+ WATRGGL KTDW++APFTA YRN+N + CVW+NGKSSC
Sbjct:    3 LSCGT---SFAFLLLFLLAAQSVHVYAGS-FHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVWANGKSSC 235          
The following BLAST results are available for this feature:
BLAST of CX070403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
XTH23_ARATH1.087e-10777.06Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH6.595e-10576.44Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH25_ARATH5.583e-10475.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH1.332e-9775.45Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH21_ARATH1.740e-9772.60Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH4.285e-9674.29Xyloglucan endotransglucosylase/hydrolase protein ... [more]
BRU1_SOYBN4.010e-9474.88Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH19_ARATH8.934e-9469.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH1.167e-9367.51Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH1.524e-9367.93Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_16E12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-16E12-J24-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070403 ID=CX070403; Name=CX070403; organism=Citrus sinensis; type=EST; length=748bp
ACCAACCCTTATAAGCTGCTTTCTGAAAACTCTCTCTTTATTGATTGCAG
TACTATGGCTTACTCAAAAAATTTTACTCTGCTCATCTCTATAGCAATCA
GCTCTTTGATGGTTGCTTCTGCTAGTAATTTCTACCAAGACTTTGATATC
ACTTGGGGAGATGGCCGTGGTAAGATACTCAACAACGGCCAGCTTCTCTC
CCTCTCCCTTGACAAAGCCTCAGGCTCAGGCTTCCAGTCCAAGAGCGAGT
ACCTTTTTGGCAAAATCGACATGCAACTCAAGCTTGTCCCTGGCAATTCT
GCCGGCACAGTCACCGCCTACTACTTAAAATCACCAGGATCAACATGGGA
TGAGATAGACTTTGAATTCTTGGGGAATTTAAGTGGTGATCCTTATACTC
TTCATACTAATGTGTTCACAAATGGCAAAGGTGACAGAGAGCAACAATTC
CACCTCTGGTTTGACCCCACTGCTGACTTTCACACCTATTCCGTTCTCTG
GAACCCCCAACGTATTGTCTTCTATGTTGATGGCTCGCCAATTAGAGAGT
TCAAGAACTTGGAATCAAACGGCGTACTCTTTCCCAAAAACCAGCCGATG
AGGATTTACTCGAGTCTCTGGAACGCCGATGACTGGGCCACGAGAGGTGG
CCTTATCAAAACTGACTGGACCCAAGCTCCCTTCACTGCTTCTTACAGAA
ACTTCAATGCCAATGCTTGCGTCTGGTCTAATGGAAAATCCTCTTGCA
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