CX070381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX070381 vs. ExPASy Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.823e-48 Identity = 99/252 (39.29%), Postives = 153/252 (60.71%), Query Frame = 2 Query: 2 YNQIPIAPKDQEKTTFTCPFGIFAYWRMSFGLCNAPATFQRCMLSIFSDMVERFLEVFMDDFSIFGDSFDQCLHHLTLVLQRCTEKNLVLNWEKCHFMVK*GIILGHIISSKGIEVDKAKVDLISNLPPPKTVREVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDVHF-IFNDSCLMAFEKLKQLLTSSPIIQAPNWSLPFELMCDASDYAVGAVLGQRVDRIPHVIYYASMTLNDAQLNYSTTEKEMLA 754 ++QI + P+ KT F+ G + Y RM FGL NAPATFQRCM I ++ + V++DD +F S D+ L L LV ++ + NL L +KC F+ + LGH+++ GI+ + K++ I P P +E+++FLG G+YR+FI +F+ +++P+ L K++ N AF+KLK L++ PI++ P+++ F L DASD A+GAVL Q H + Y S TLN+ ++NYST EKE+LA Sbjct: 307 FHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQD----GHPLSYISRTLNEHEINYSTIEKELLA 554
BLAST of CX070381 vs. ExPASy Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.563e-45 Identity = 101/252 (40.08%), Postives = 148/252 (58.73%), Query Frame = 2 Query: 2 YNQIPIAPKDQEKTTFTCPFGIFAYWRMSFGLCNAPATFQRCMLSIFSDMVERFLEVFMDDFSIFGDSFDQCLHHLTLVLQRCTEKNLVLNWEKCHFMVK*GIILGHIISSKGIEVDKAKVDLISNLPPPKTVREVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDVHFIFND-SCLMAFEKLKQLLTSSPIIQAPNWSLPFELMCDASDYAVGAVLGQRVDRIPHVIYYASMTLNDAQLNYSTTEKEMLA 754 ++QI + + KT F+ G + Y RM FGL NAPATFQRCM +I ++ + V++DD IF S + L+ + LV + + NL L +KC F+ K LGHI++ GI+ + KV I + P P +E+R+FLG G+YR+FI +++ +++P+ + L K + AFEKLK L+ PI+Q P++ F L DAS+ A+GAVL Q H I + S TLND +LNYS EKE+LA Sbjct: 306 FHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQN----GHPISFISRTLNDHELNYSAIEKELLA 553
BLAST of CX070381 vs. ExPASy Swiss-Prot
Match: POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.734e-44 Identity = 100/262 (38.17%), Postives = 153/262 (58.40%), Query Frame = 2 Query: 2 YNQIPIAPKDQEKTTFTCPFGIFAYWRMSFGLCNAPATFQRCMLSIFSDMVERFLEVFMDDFSIFGDSFDQCLHHLTLVLQRCTEKNLVLNWEKCHFMVK*GIILGHIISSKGIEVDKAKVDLISNLPPPKTVREVRSFLGHAGFYRRFIKDFSKVSRPLCNLL-----------AKDVHFIFNDSCLMAFEKLKQLLTSSPIIQAPNWSLPFELMCDASDYAVGAVLGQRVDRIPHVIYYASMTLNDAQLNYSTTEKEMLA 754 ++QI + D KT F+ G + + R+ FGL NAPA FQR + I + + + V++DD +F + +D +L LVL ++ NL +N EK HF+ LG+I+++ GI+ D KV IS +PPP +V+E++ FLG +YR+FI+D++KV++PL NL + V +++ L +F LK +L SS I+ P ++ PF L DAS++A+GAVL Q I Y S +LN + NY+T EKEMLA Sbjct: 223 FHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLA 484
BLAST of CX070381 vs. ExPASy Swiss-Prot
Match: RTF21_SCHPO (Retrotransposable element Tf2 155 kDa protein type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.857e-38 Identity = 93/252 (36.90%), Postives = 138/252 (54.76%), Query Frame = 2 Query: 2 YNQIPIAPKDQEKTTFTCPFGIFAYWRMSFGLCNAPATFQRCMLSIFSDMVERFLEVFMDDFSIFGDSFDQCLHHLTLVLQRCTEKNLVLNWEKCHFMVK*GIILGHIISSKGIEVDKAKVDLISNLPPPKTVREVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDVHFIFNDSCLMAFEKLKQLLTSSPIIQAPNWSLPFELMCDASDYAVGAVLGQRVDRIPHV-IYYASMTLNDAQLNYSTTEKEMLA 754 Y+ I + D+ K F CP G+F Y M +G+ APA FQ + +I + E + +MDD I S + + H+ VLQ+ NL++N KC F +G+ IS KG + +D + PK +E+R FLG + R+FI S+++ PL NLL KDV + + + A E +KQ L S P+++ ++S L DASD AVGAVL Q+ D + + Y S ++ AQLNYS ++KEMLA Sbjct: 507 YHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLA 758
BLAST of CX070381 vs. ExPASy Swiss-Prot
Match: RTF23_SCHPO (Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.215e-38 Identity = 92/252 (36.51%), Postives = 139/252 (55.16%), Query Frame = 2 Query: 2 YNQIPIAPKDQEKTTFTCPFGIFAYWRMSFGLCNAPATFQRCMLSIFSDMVERFLEVFMDDFSIFGDSFDQCLHHLTLVLQRCTEKNLVLNWEKCHFMVK*GIILGHIISSKGIEVDKAKVDLISNLPPPKTVREVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDVHFIFNDSCLMAFEKLKQLLTSSPIIQAPNWSLPFELMCDASDYAVGAVLGQRVDRIPHV-IYYASMTLNDAQLNYSTTEKEMLA 754 Y+ I + D+ K F CP G+F Y M +G+ APA FQ + +I ++ E + +MD+ I S + + H+ VLQ+ NL++N KC F +G+ IS KG + +D + PK +E+R FLG + R+FI S+++ PL NLL KDV + + + A E +KQ L S P+++ ++S L DASD AVGAVL Q+ D + + Y S ++ AQLNYS ++KEMLA Sbjct: 507 YHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLA 758
BLAST of CX070381 vs. ExPASy Swiss-Prot
Match: RTF22_SCHPO (Retrotransposable element Tf2 155 kDa protein type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.215e-38 Identity = 92/252 (36.51%), Postives = 139/252 (55.16%), Query Frame = 2 Query: 2 YNQIPIAPKDQEKTTFTCPFGIFAYWRMSFGLCNAPATFQRCMLSIFSDMVERFLEVFMDDFSIFGDSFDQCLHHLTLVLQRCTEKNLVLNWEKCHFMVK*GIILGHIISSKGIEVDKAKVDLISNLPPPKTVREVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDVHFIFNDSCLMAFEKLKQLLTSSPIIQAPNWSLPFELMCDASDYAVGAVLGQRVDRIPHV-IYYASMTLNDAQLNYSTTEKEMLA 754 Y+ I + D+ K F CP G+F Y M +G+ APA FQ + +I ++ E + +MD+ I S + + H+ VLQ+ NL++N KC F +G+ IS KG + +D + PK +E+R FLG + R+FI S+++ PL NLL KDV + + + A E +KQ L S P+++ ++S L DASD AVGAVL Q+ D + + Y S ++ AQLNYS ++KEMLA Sbjct: 507 YHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLA 758
BLAST of CX070381 vs. ExPASy Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 3.502e-37 Identity = 94/252 (37.30%), Postives = 139/252 (55.16%), Query Frame = 2 Query: 2 YNQIPIAPKDQEKTTFTCPFGIFAYWRMSFGLCNAPATFQRCMLSIFSDMVERFLEVFMDDFSIFGDSFDQCLHHLTLVLQRCTEKNLVLNWEKCHFMVK*GIILGHIISSKGIEVDKAKVDLISNLPPPKTVREVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDVHFIFNDSCLMAFEKLKQLLTSSPIIQAPNWSLPFELMCDASDYAVGAVLGQ--RVDRIPHVIYYASMTLNDAQLNYSTTEKEML 751 Y+QIP+ PKD+ KT F P G + Y M FGL NAP+TF R M F D+ RF+ V++DD IF +S ++ HL VL+R +NL++ +KC F + LG+ I + I + K I + P PKTV++ + FLG +YRRFI + SK+++P+ + + A EKLK L +SP++ N + L DAS +GAVL + +++ V+ Y S +L AQ NY E E+L Sbjct: 717 YHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQD--KAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELL 964
BLAST of CX070381 vs. ExPASy Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 5.973e-37 Identity = 93/252 (36.90%), Postives = 139/252 (55.16%), Query Frame = 2 Query: 2 YNQIPIAPKDQEKTTFTCPFGIFAYWRMSFGLCNAPATFQRCMLSIFSDMVERFLEVFMDDFSIFGDSFDQCLHHLTLVLQRCTEKNLVLNWEKCHFMVK*GIILGHIISSKGIEVDKAKVDLISNLPPPKTVREVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDVHFIFNDSCLMAFEKLKQLLTSSPIIQAPNWSLPFELMCDASDYAVGAVLGQ--RVDRIPHVIYYASMTLNDAQLNYSTTEKEML 751 Y+QIP+ PKD+ KT F P G + Y M FGL NAP+TF R M F D+ RF+ V++DD IF +S ++ HL VL+R +NL++ +KC F + LG+ I + I + K I + P PKTV++ + FLG +YRRFI + SK+++P+ + + A +KLK L +SP++ N + L DAS +GAVL + +++ V+ Y S +L AQ NY E E+L Sbjct: 691 YHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQD--KAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELL 938
BLAST of CX070381 vs. ExPASy Swiss-Prot
Match: POLY_DROME (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.973e-37 Identity = 92/263 (34.98%), Postives = 147/263 (55.89%), Query Frame = 2 Query: 2 YNQIPIAPKDQEKTTFTCPFGIFAYWRMSFGLCNAPATFQRCMLSIFSDMVERFLEVFMDDFSIFGDSFDQCLHHLTLVLQRCTEKNLVLNWEKCHFMVK*GIILGHIISSKGIEVDKAKVDLISNLPPPKTVREVRSFLGHAGFYRRFIKDFSKVSRPLCNLL-----------AKDVHFIFNDSCLMAFEKLKQLLTSSPII-QAPNWSLPFELMCDASDYAVGAVLGQRVDRIPHVIYYASMTLNDAQLNYSTTEKEMLA 754 Y+QI +A D+EKT+F+ G + + R+ FGL NA + FQR + + + + + V++DD IF ++ + H+ VL+ + N+ ++ EK F + LG I+S G + D KV I P P V +VRSFLG A +YR FIKDF+ ++RP+ ++L +K + FN++ AF++L+ +L S +I + P++ PF+L DAS +GAVL Q I + S TL + NY+T E+E+LA Sbjct: 282 YHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMI----SRTLKQPEQNYATNERELLA 540
BLAST of CX070381 vs. ExPASy Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=4 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36 Identity = 93/251 (37.05%), Postives = 132/251 (52.59%), Query Frame = 2 Query: 2 YNQIPIAPKDQEKTTFTCPFGIFAYWRMSFGLCNAPATFQRCMLSIFSDMVERFLEVFMDDFSIFGDSFDQCLHHLTLVLQRCTEKNLVLNWEKCHFMVK*GIILGHIISSKGIEVDKAKVDLISNLPPPKTVREVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDVHFIFNDSCLMAFEKLKQLLTSSPIIQAPNWSLPFELMCDASDYAVGAVLGQRVDRIPHVIYYASMTLNDAQLNYSTTEKEMLA 754 ++QI + ++ T+F+ G + + R+ FGL AP +FQR M FS + ++MDD + G S L +LT V +C E NL L+ EKC F + LGH + KGI D K D+I N P P R F+ +YRRFIK+F+ SR + L K+V F + D C AF LK L + ++Q P++S F + DAS A GAVL Q + + YAS + N STTE+E+ A Sbjct: 415 FHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKSTTEQELAA 665 The following BLAST results are available for this feature:
BLAST of CX070381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070381 ID=CX070381; Name=CX070381; organism=Citrus sinensis; type=EST; length=755bpback to top |