CX070361

Overview
NameCX070361
Unique NameCX070361
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_CITSI (30S ribosomal protein S7, chloroplastic OS=Citrus sinensis GN=rps7-A PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.569e-81
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_OLIPU (30S ribosomal protein S7, chloroplastic OS=Olimarabidopsis pumila GN=rps7-A PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.125e-79
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_NASOF (30S ribosomal protein S7, chloroplastic OS=Nasturtium officinale GN=rps7-A PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.125e-79
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_LOBMA (30S ribosomal protein S7, chloroplastic OS=Lobularia maritima GN=rps7-A PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.125e-79
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_LEPVR (30S ribosomal protein S7, chloroplastic OS=Lepidium virginicum GN=rps7-A PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.125e-79
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_GOSHI (30S ribosomal protein S7, chloroplastic OS=Gossypium hirsutum GN=rps7-A PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.125e-79
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_GOSBA (30S ribosomal protein S7, chloroplastic OS=Gossypium barbadense GN=rps7-A PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.125e-79
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_DRANE (30S ribosomal protein S7, chloroplastic OS=Draba nemorosa GN=rps7-A PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.125e-79
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_CRUWA (30S ribosomal protein S7, chloroplastic OS=Crucihimalaya wallichii GN=rps7-A PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.125e-79
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of CX070361 vs. ExPASy Swiss-Prot
Match: RR7_CARPA (30S ribosomal protein S7, chloroplastic OS=Carica papaya GN=rps7-A PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.125e-79
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = -3 
Query:  128 MSRRGTTEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTEKNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSAQGKALAVRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 592
            MSRRGT EEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTE NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGS QGKALA+RWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct:    1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
The following BLAST results are available for this feature:
BLAST of CX070361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RR7_CITSI1.569e-81100.0030S ribosomal protein S7, chloroplastic OS=Citrus ... [more]
RR7_OLIPU1.125e-7997.4230S ribosomal protein S7, chloroplastic OS=Olimara... [more]
RR7_NASOF1.125e-7997.4230S ribosomal protein S7, chloroplastic OS=Nasturt... [more]
RR7_LOBMA1.125e-7997.4230S ribosomal protein S7, chloroplastic OS=Lobular... [more]
RR7_LEPVR1.125e-7997.4230S ribosomal protein S7, chloroplastic OS=Lepidiu... [more]
RR7_GOSHI1.125e-7997.4230S ribosomal protein S7, chloroplastic OS=Gossypi... [more]
RR7_GOSBA1.125e-7997.4230S ribosomal protein S7, chloroplastic OS=Gossypi... [more]
RR7_DRANE1.125e-7997.4230S ribosomal protein S7, chloroplastic OS=Draba n... [more]
RR7_CRUWA1.125e-7997.4230S ribosomal protein S7, chloroplastic OS=Crucihi... [more]
RR7_CARPA1.125e-7997.4230S ribosomal protein S7, chloroplastic OS=Carica ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_16D02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-16D02-H4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070361 ID=CX070361; Name=CX070361; organism=Citrus sinensis; type=EST; length=825bp
TTTTTTTTTTTTTTTTTCGAGAAATATATCGATCAATTCCGACTCTTTCT
TTTTCTATTGATTCTTTTCCGATCGAGATGTATGGATCCACGGATCTATG
TGTCTATATAGACCCTGTTATGGATTAACGAAAATGTGCAAAAGCTCTAT
TTGCCTCTGCCATTCTATGAGTCTCTTCCTTTTTGCGTATGGCATCGCCA
CTCCCTTTGGCAGCATCCACTAATTCGGAACTTAATTTGAAAGCCATATT
TCGACCCGGACGTTTTCGGGATGCCCCTAATAACCAACGAACGGCAAGTG
CTTTTCCTTGTGCGGATCCTATTTCAATGGGAACTTGATGAGTCGATCCG
CCTACACGTCTTGCTTTTACTGCTATATCGGGAGTTACTCCACGTATTGC
TTGACGTAAAACAGATAGTGGATTTTTTTCTGTCTTTTGTTGAATCTTTT
TCAAGGCTCGATAGATAATTTGATAAGCCAATGATTTTTTTCCGTGTTTC
AGAATACGGTTAACCAACATGTTAACTAATCGATTACGATAAATTGGATC
GGATTTTGCAGTTTTTTCTTCTGTAGTACCTCGACGTGACATGAGCGCGA
AAGGGGTTCAAGAATCCGTTTTCTTTTTATAAGGGCTAAAATCATTTATT
TTGGCTTTTTGACCCCATATTTAGAACGCCCTTGTTGACGATCCTTTACT
CCGACAGCATCTAGGGTTCCTCGAACAATGTGATATCTCACACCGGGTAA
ATCCTTAACCCTCCCCCCTCTTACTAAGACTACAGAATGTTCTTGTAAAT
TATGGCCAATACCAGGTATATAAGC
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