DR404347

Overview
NameDR404347
Unique NameDR404347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6949 contig Csv1_Contig6949:29..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404347 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 8.489e-80
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 698
            MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVI+NREGI WATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW
Sbjct:    1 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGICWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 142          
BLAST of DR404347 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.295e-75
Identity = 130/142 (91.55%), Postives = 137/142 (96.48%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 698
            MFIENFKVESPNVKYT+ EIHSVYDY+TTELVHE +NGTYQW VKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVI+NREGISWATKD VQQANYFGSLTQAS IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGW
Sbjct:    1 MFIENFKVESPNVKYTESEIHSVYDYQTTELVHEEKNGTYQWTVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGW 142          
BLAST of DR404347 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.074e-74
Identity = 130/142 (91.55%), Postives = 139/142 (97.89%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 698
            MFIE+FKVESPNVKYT+ EIHSVY+YETTELVHE+RNGTYQWIVKPKTVKYEFKTD HVPKLGVMLVGWGGNNGSTLTGGVI+NREGISWATKD VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGW
Sbjct:    1 MFIESFKVESPNVKYTEGEIHSVYNYETTELVHESRNGTYQWIVKPKTVKYEFKTDTHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGW 142          
BLAST of DR404347 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.402e-74
Identity = 129/142 (90.85%), Postives = 137/142 (96.48%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 698
            MFIENFKVESPNVKYT+ EIHSVYDY+TTELVH+ +NGTYQW VKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVI+NREGISWATKD VQQANYFGSLTQAS IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGW
Sbjct:    1 MFIENFKVESPNVKYTESEIHSVYDYQTTELVHDEKNGTYQWTVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGW 142          
BLAST of DR404347 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.960e-74
Identity = 127/142 (89.44%), Postives = 138/142 (97.18%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 698
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHENRNGTYQW+VKPKTVKY+FKTD  VPKLGVMLVGWGGNNGSTLT GVI+N+EGISWATKD VQQANYFGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGW
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLVGWGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSYNGEEIYAPFKSLLPMVNPDDVVFGGW 142          
BLAST of DR404347 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.313e-72
Identity = 125/142 (88.03%), Postives = 138/142 (97.18%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 698
            MFIE+FKVESPNVKYT++EI+SVYDYETTE+VHENRNGTYQW+VKPKTVKY+FKTD  VPKLGVMLVGWGGNNGSTLT GVI+N+EGISWATKD VQQANYFGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVNP+D+VFGGW
Sbjct:    1 MFIESFKVESPNVKYTENEINSVYDYETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLVGWGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSYNGEEIYAPFKSLLPMVNPEDVVFGGW 142          
BLAST of DR404347 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 6.515e-72
Identity = 124/142 (87.32%), Postives = 137/142 (96.48%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 698
            MFIE+FKVESPNVKYT++EIHSVYDY+TTELVHEN+NG +QW VKPKTVKYEFKTD HVPKLGVMLVGWGGNNGSTLT GVI+NREGISWATK+ VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNP++IVFGGW
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYQTTELVHENKNGAFQWTVKPKTVKYEFKTDTHVPKLGVMLVGWGGNNGSTLTAGVIANREGISWATKEKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPEEIVFGGW 142          
BLAST of DR404347 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 9.407e-71
Identity = 122/142 (85.92%), Postives = 135/142 (95.07%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 698
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHEN NG YQWIVKPK VKY+FKTD  VPKLGVMLVGWGGNNGSTLT GVI+N+EGISWATKD VQQANYFGSLTQAS+IRVGS+NGEE+YAPFKS++PMVNPDD+VFGGW
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHENVNGAYQWIVKPKVVKYDFKTDTRVPKLGVMLVGWGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEMYAPFKSLVPMVNPDDVVFGGW 142          
BLAST of DR404347 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.358e-69
Identity = 124/143 (86.71%), Postives = 136/143 (95.10%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENR-NGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 698
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHE   NGTYQWIVKPKTVKY+FKTD+ VPKLGVMLVG GGNNGSTLT GVI+N+EGISWATKD VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGW
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVMLVGLGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGW 143          
BLAST of DR404347 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 262.692 bits (670), Expect = 1.358e-69
Identity = 124/143 (86.71%), Postives = 136/143 (95.10%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENR-NGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGW 698
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHE   NGTYQWIVKPKTVKY+FKTD+ VPKLGVMLVG GGNNGSTLT GVI+N+EGISWATKD VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGW
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVMLVGLGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGW 143          
The following BLAST results are available for this feature:
BLAST of DR404347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_CITPA8.489e-8098.59Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_TOBAC6.295e-7591.55Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_SESIN1.074e-7491.55Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_NICPA1.402e-7490.85Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_WHEAT6.960e-7489.44Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO2_ARATH1.313e-7288.03Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO3_ARATH6.515e-7287.32Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_BRANA9.407e-7185.92Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_PHAVU1.358e-6986.71Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH1.358e-6986.71Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAE-PNP1243A18 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243A18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404347 ID=DR404347; Name=DR404347; organism=Citrus sinensis; type=EST; length=698bp
GGGATACACAGATTACCAAGCTAGTTTCGAAAGTTAAAAGAGTGTTGAGT
CGAGTGGGAAGTGAGAATTGAGAAGGAGAGTTGAGTTCGGAGACAGCAAG
ACGAAACAGCTCTTCTTCCAATAAATCTCAAAAGCATTTGTTTGGTTTTA
TTTAAAGCAATTTTCTCAGCAAACTCTTCTTCTAATAAATTTTAAAGCAT
TTGTTTGGTTTTTATTTAAAGCAATTTTCTCAGCGAAGTTTTCAATTTTT
TCTCTAAAATTTTCCTGGGAAAATGTTTATCGAAAATTTCAAGGTTGAGA
GCCCAAATGTGAAGTACACAGATCATGAGATTCACTCTGTGTACGATTAT
GAAACCACTGAGCTTGTTCATGAGAACAGAAATGGCACTTATCAGTGGAT
TGTCAAGCCCAAAACTGTCAAATATGAGTTCAAAACCGATGTTCATGTCC
CTAAACTTGGGGTTATGCTTGTGGGTTGGGGTGGAAACAACGGCTCAACT
CTCACGGGTGGTGTTATCTCGAATCGAGAGGGAATCTCCTGGGCCACAAA
GGACACTGTGCAACAAGCCAATTATTTTGGTTCACTTACCCAAGCATCAG
CAATTAGAGTTGGGTCTTACAATGGAGAGGAGATTTATGCTCCATTCAAG
AGCATTCTCCCTATGGTGAACCCAGATGACATTGTGTTTGGAGGATGG
back to top