CX070319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070319 vs. ExPASy Swiss-Prot
Match: UFD1_DICDI (Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum GN=ufd1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15 Identity = 64/225 (28.44%), Postives = 88/225 (39.11%), Query Frame = -2 Query: 156 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPXXXXXSNRTLPEVKEEPPLDFKGPEK-----PSSSSL------SNRTXXXXXXXXXXKIAKFSPFTGSGRCLNGKXXXXXXXXXXXPLIDNPQQXXXXXXXXXXXXXXXXXXXXXKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 797 VLE +LR ++ LT D IM+ YNN KYY+ VVE KP+ A+SIIE D VDF PP+D KE P P GP K P+S+S + KF F G+G L+GK +N +N N ++N ++S E KF++F+GK +SL+ Sbjct: 145 VLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKPANAISIIEADVSVDFAPPMDSKEATSPS------------TSSPGSHVSGPSKGLTFGPASTSAKPIPGGKKKKDESDSDSDSDDEPKFKAFAGTGARLDGKVGTPLGTSPKTLNTNN----------------------------NNNNNNNNNNNNNNNNNNNSNNNNTKNEDTKFKSFSGKGHSLK 329
BLAST of CX070319 vs. ExPASy Swiss-Prot
Match: UFD1_RAT (Ubiquitin fusion degradation protein 1 homolog OS=Rattus norvegicus GN=Ufd1l PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.006e-15 Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = -2 Query: 609 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKP 797 VLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +KEPE+P Sbjct: 141 VLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERP 203
BLAST of CX070319 vs. ExPASy Swiss-Prot
Match: UFD1_MOUSE (Ubiquitin fusion degradation protein 1 homolog OS=Mus musculus GN=Ufd1l PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14 Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = -2 Query: 609 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKP 797 VLE LR+++C+TTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +KEP++P Sbjct: 141 VLENALRNFACMTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPKRP 203
BLAST of CX070319 vs. ExPASy Swiss-Prot
Match: UFD1_HUMAN (Ubiquitin fusion degradation protein 1 homolog OS=Homo sapiens GN=UFD1L PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 4.541e-14 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = -2 Query: 612 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 797 VLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +KEPE+ Sbjct: 141 VLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER 202 The following BLAST results are available for this feature:
BLAST of CX070319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070319 ID=CX070319; Name=CX070319; organism=Citrus sinensis; type=EST; length=798bpback to top |