CX070285

Overview
NameCX070285
Unique NameCX070285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX070285 vs. ExPASy Swiss-Prot
Match: THIO1_SYNY3 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803) GN=slr0233 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.487e-15
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 2 
Query:  524 CGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKDGKPSDR 697
            CGPCQ MAPIL +VG+ L+ +IQVVKIDT+KYP IA  Y+I++LPT +LFK G+P  R
Sbjct:   30 CGPCQMMAPILEQVGSHLRQQIQVVKIDTDKYPAIATQYQIQSLPTLVLFKQGQPVHR 87
The following BLAST results are available for this feature:
BLAST of CX070285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
THIO1_SYNY31.487e-1563.79Thioredoxin-like protein slr0233 OS=Synechocystis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_15H05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15H05-P9-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070285 ID=CX070285; Name=CX070285; organism=Citrus sinensis; type=EST; length=822bp
AACTTCATCTTCCTCCAAACGTCGCTTGCTGCCAGTGGTACTCTTTGATT
TTGCTTTGTTTTGAGTAGTTTTTAATTAATATTTGTTTACGAGTTCCTTA
ATTGAAATAATTACTTTCGGTAGGTTGAAGCGAAGAAGCAAACATTTTCG
TCACTTGATGATTTGCTGCAGAAATCTGACAAGCCTGTGTTGGTTGACTT
CTATGCCACCTGGTAATTTTCATCCTTCGCTCAAGAAAATTTTAACATTG
TATAATGAACATCAAGTTGATTACTTAGGCTATATTTTTTACTTAATTTT
AATAACAAAGTAGCTAAATTGTTTGGTGAGCATTCTTTTTTATGGCAGCT
AATGTTGATTGCCTAGCCACTTGCCTATACTTGTCAGCCAGTAATTTCAT
TCCACAGCTTCTGATTTTGTTTTTGTCTTGTTTGTTAACAGTTACCATCT
AGTGTTTGCACTTCAAGTTTGTTAAAAGGTTTTATAAATTGAAACATAGA
CAACTCGTGATATGGTTTGCAGGTGTGGTCCTTGTCAGTACATGGCTCCT
ATCCTCAATGAAGTTGGTGCTGCTCTGAAAGATAAGATTCAGGTGGTCAA
AATCGATACTGAGAAGTACCCTCAGATCGCTGATACATACAGAATAGAGG
CCTTGCCAACTTTCATTCTATTTAAGGACGGGAAACCTTCTGATCGCTTC
GTAAGTCAATTTAATATTGTTTTTTTTGTTTTCCTTGAAAATTTAATTTG
TGCATCTTTACAAAATCATTGTTTATTCTCGGTGAAAATGCATTAAAGTG
TCAAGTGACTACTATGAATAAC
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