CX070272

Overview
NameCX070272
Unique NameCX070272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECOSM (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=yfaU PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.101e-32
Identity = 70/193 (36.27%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E+  +  K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G  E Y+++  + L ++ QVES+  +   ++I  V+G+D V +GP DLSAS+GY  + GH +V+ ++  +
Sbjct:   10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEASKSLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAHVNDSLCLLVQVESKTALDNLDEILGVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
[Close]
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_KLEP7 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=yfaU PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32
Identity = 75/190 (39.47%), Postives = 113/190 (59.47%), Query Frame = 3 
Query:  258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMM 827
            K  L   ET  GL+L S S  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E   +  K+ LD+G + ++ PM+D+ E A+E VS  R+PP G RG    V RA+ +G  E Y++   +EL ++ QVES   ++  + I  VDG+D V +GP DLSAS+GY  D GH  V+ ++
Sbjct:   10 KRGLLRGETQIGLWLSSTSSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAIAPYASQPVIRPVEGNRSLIKQVLDIGARTLLVPMVDTAEQAREVVSATRYPPIGSRGVGAGVARAARWGRVENYMAEANDELCLLIQVESRTALENLDAILEVDGIDGVFIGPADLSASLGYPDDAGHPDVQRVI 199
[Close]
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECOLI (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12) GN=yfaU PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32
Identity = 71/193 (36.79%), Postives = 116/193 (60.10%), Query Frame = 3 
Query:  258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G  E Y++   + L ++ QVES+  +   ++I  V+G+D V +GP DLSAS+GY  + GH +V+ ++  +
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
[Close]
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECOLC (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=yfaU PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32
Identity = 71/193 (36.79%), Postives = 116/193 (60.10%), Query Frame = 3 
Query:  258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G  E Y++   + L ++ QVES+  +   ++I  V+G+D V +GP DLSAS+GY  + GH +V+ ++  +
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
[Close]
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECOHS (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O9:H4 (strain HS) GN=yfaU PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32
Identity = 71/193 (36.79%), Postives = 116/193 (60.10%), Query Frame = 3 
Query:  258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G  E Y++   + L ++ QVES+  +   ++I  V+G+D V +GP DLSAS+GY  + GH +V+ ++  +
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
[Close]
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECODH (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12 / DH10B) GN=yfaU PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32
Identity = 71/193 (36.79%), Postives = 116/193 (60.10%), Query Frame = 3 
Query:  258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G  E Y++   + L ++ QVES+  +   ++I  V+G+D V +GP DLSAS+GY  + GH +V+ ++  +
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
[Close]
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECOBW (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12 / BW2952) GN=yfaU PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32
Identity = 71/193 (36.79%), Postives = 116/193 (60.10%), Query Frame = 3 
Query:  258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G  E Y++   + L ++ QVES+  +   ++I  V+G+D V +GP DLSAS+GY  + GH +V+ ++  +
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
[Close]
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECO7I (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=yfaU PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32
Identity = 70/193 (36.27%), Postives = 118/193 (61.14%), Query Frame = 3 
Query:  258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E+  +  K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G  E Y++   + L ++ QVES+  +   ++I  V+G+D V +GP DLSAS+GY  + GH +V+ ++  +
Sbjct:   10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEASKSLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDHLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
[Close]
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECOLU (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=yfaU PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.024e-32
Identity = 70/193 (36.27%), Postives = 117/193 (60.62%), Query Frame = 3 
Query:  258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E   +  K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G  E Y++   + L ++ QVES+  +   ++I  V+G+D V +GP DLSAS+GY  + GH +V+ ++  +
Sbjct:   10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKSLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETS 202
[Close]
BLAST of CX070272 vs. ExPASy Swiss-Prot
Match: KDRA_ECOL5 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=yfaU PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.024e-32
Identity = 70/193 (36.27%), Postives = 117/193 (60.62%), Query Frame = 3 
Query:  258 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 836
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G  E Y++   + L ++ QVES+  +   ++I  V+G+D V +GP DLSAS+GY  + GH++V+ ++  +
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHQEVQRIIETS 202
The following BLAST results are available for this feature:
BLAST of CX070272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
KDRA_ECOSM3.101e-3236.272-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_KLEP76.909e-3239.472-keto-3-deoxy-L-rhamnonate aldolase OS=Klebsiella... [more]
KDRA_ECOLI6.909e-3236.792-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOLC6.909e-3236.792-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOHS6.909e-3236.792-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECODH6.909e-3236.792-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOBW6.909e-3236.792-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECO7I6.909e-3236.272-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOLU9.024e-3236.272-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOL59.024e-3236.272-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15G10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15G10-N19-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070272 ID=CX070272; Name=CX070272; organism=Citrus sinensis; type=EST; length=845bp
CTGAAACTGAGACAATTACAAAAGCAACCATGACCACGCTCACTTGCTCG
GGCTCCGGCACTGCCGCCACTGTCGCCAAGCTTGCACAAAATAAAATCAG
TTCATTTCCAAAAGCACCCTTGTTCACCCTCAACGGCAACAAATCGAAAA
TCGTTTTCCCAAAACTGAAATTGACCCCCTCAGTCTCACGCTCACCCTCG
GATCTGTCGCCAGGCGATCCCCTTTCCCCATCTCCATCACCCTCGCCCGA
ATCACTCAAGTATCGCCTCCAAAGCAACGAAACCCTGTACGGACTCTTCC
TCCTCTCTTTCTCCCCAACTCTTGCCGAAATTTCGGGCCTGGCCGGTTAC
GATTTCGTCGTCGTAGACATGGAGCACGGCCCTGGCGGCATTTCCGATGC
TCTCGCTTGCCTTCACGCTCTTGCCGCCACGGGGACGCCGGCCATTCTGC
GGCTCCCTGAAAGTTGCCCAACTTGGGCTAAAAAGGCCCTCGATCTGGGC
CCACAAGGGGTCATGTTCCCTATGATTGACTCCCCAGAAGCCGCCAAGGA
AGCGGTGTCGTATTGCCGGTTCCCGCCTTCTGGAGTGCGGGGATCCGCTC
ACACGGTGGTGAGAGCGTCCGGTTACGGGATTGATGAGGGATACTTGAGT
AATTACGAGGAGGAGTTGTTGATTATGTGCCAGGTGGAGAGCGAGGAAGG
CGTCAAGCGAGCCGAAGACATCGCGGCGGTTGATGGGGTTGACTGCGTGC
AAATGGGACCGTTGGATTTGAGTGCGAGTATGGGGTACTTGTGGGACCCA
GGGCACAGGAAGGTGAGGGAGATGATGAGGGTGGCGGAGAAAGGG
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