CX070263
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX070263 vs. ExPASy Swiss-Prot
Match: CPL4_ARATH (RNA polymerase II C-terminal domain phosphatase-like 4 OS=Arabidopsis thaliana GN=CPL4 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 9.385e-41 Identity = 100/231 (43.29%), Postives = 139/231 (60.17%), Query Frame = 2 Query: 5 ETAKLLDPRREYFNARVIS*DDGTQRHQKGLDVVLGQESAVLILDDTENAST*QGDNLILMERYHFFASSCRQFGYHCQSLSQLRSVVCELEGALASILKDLKRIHNMFFK-------------VLKMVRGKS*RGVNLSSVMLFQANFQ----HIFTICGRWWSS*ELRAR*NLIHQ*HTWFQTNAQTKKSHWAAKEAKFLVDPRWIEAANCLWQGQLEEKFPVKQTKPE 646 + AKLLDP+ EYF RVIS DDGT RH+K LDVVLGQESAVLILDDTENA DNLI++ERYHFF+SSCRQF + +SLS+L+S E +GALA++LK LK+ H +FF+ +LK VR + +G + +F + ++ + ++ ++ H + T+K+ WA +E K++V WI+AAN LW Q EE F ++Q K + Sbjct: 209 QMAKLLDPKGEYFGDRVISRDDGTVRHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQFDHRYKSLSELKSDESEPDGALATVLKVLKQAHALFFENVDEGISNRDVRLMLKQVRKEILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVTHV----VAMDVGTEKARWAVREKKYVVHRGWIDAANYLWMKQPEENFGLEQLKKQ 435
BLAST of CX070263 vs. ExPASy Swiss-Prot
Match: CPL3_ARATH (RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis thaliana GN=CPL3 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.155e-14 Identity = 75/231 (32.47%), Postives = 108/231 (46.75%), Query Frame = 2 Query: 5 ETAKLLDPRREYFNARVIS*DD------GTQRHQKGLDV--VLGQESAVLILDDTENAST*QGDNLILMERYHFFASSCRQFGYHCQSLSQLRSVVCELEGALASILKDLKRIHNMFF-----------KVLKMVRGKS*RGVNL--SSVMLFQANFQHIFTICGRWWSS*ELRAR*NLIHQ*H-TWFQTNA-QTKKSHWAAKEAKFLVDPRWIEAANCLWQGQLEEKFPV 628 E AKLLDP+ FN RVIS D G +R K D+ V+G ES+V+I+DD+ NLI +ERY +F S RQFG SL +L EG LAS L +++IH FF +L + K G + S ++ H+ + W ++ + A H T TN+ T K +WA +F+V P W+EA+ L+Q E + + Sbjct: 1012 EMAKLLDPKGVLFNGRVISKGDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDSVRVWPQHKMNLIAVERYLYFPCSRRQFGLLGPSLLELDRDEVPEEGTLASSLAVIEKIHQNFFSHTSLDEVDVRNILASEQRKILAGCRIVFSRIIPVGEAKPHLHPL---WQTAEQFGAVCTTQVDEHVTHVVTNSLGTDKVNWALTRGRFVVHPGWVEASAFLYQRANENLYAI 1239 The following BLAST results are available for this feature:
BLAST of CX070263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070263 ID=CX070263; Name=CX070263; organism=Citrus sinensis; type=EST; length=781bpback to top |