CX070147

Overview
NameCX070147
Unique NameCX070147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX070147 vs. ExPASy Swiss-Prot
Match: YC49L_SYNY3 (Ycf49-like protein OS=Synechocystis sp. (strain PCC 6803) GN=sll0608 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.658e-29
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 3 
Query:  219 NALSLPTWAIHVSSVAEWITAMALVWQYGEKSGFESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQGALTVIGNATMCYAAYRIYKSSEERS 515
            NALS+PTW +HVSSV EWI A+ALV +Y  K+G+  W+ L+WGMVP L  A CACTWHFF N+  L+ LV LQ   TVIGN T+C AA+ IY+ S + S
Sbjct:    2 NALSIPTWMVHVSSVIEWIVAIALVSRYATKAGYGHWRALAWGMVPALVSATCACTWHFFDNASQLDWLVTLQALTTVIGNITLCLAAWWIYRQSAQPS 100
The following BLAST results are available for this feature:
BLAST of CX070147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YC49L_SYNY36.658e-2958.59Ycf49-like protein OS=Synechocystis sp. (strain PC... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_15A08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15A08-B15-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070147 ID=CX070147; Name=CX070147; organism=Citrus sinensis; type=EST; length=806bp
CAACATTGCTCTTGCATCCGCCAAATCCAATCTCCACGCACAATCATAAA
AGAACCCTGCTGTTAGCTAACTCTACTCGTACACGAAAACCTATTAAAAA
CGCTTTAATTAATGGCCGAGGAAAGGCTATCGGTGGTCTCATTGGAGCTG
GTTTGGCCCTGACTCTGTTGGAACCCGTATCGGCTGCTGAGTTACCGTTG
CAGCTGAGTGAACCCGCCAATGCCTTGTCCTTGCCCACCTGGGCTATACA
CGTGTCCAGTGTCGCTGAGTGGATTACCGCTATGGCTTTGGTGTGGCAAT
ATGGGGAGAAATCTGGGTTTGAATCATGGAAGGGTCTCTCTTGGGGTATG
GTACCCCTGCTTGGTGGAGCATTTTGTGCATGCACATGGCATTTCTTTTA
TAATTCCGAATCGCTTGAGGTACTGGTTGCCCTTCAAGGAGCACTGACAG
TGATAGGTAACGCAACAATGTGTTATGCTGCATACCGCATATATAAATCA
TCTGAGGAACGCTCCCAGAATCTCTAAAGATTATATATGTGTGTGTATAT
ATTAGCATACAATTAATCACTCCCCCCTTGCTATGCAACATTGGAAACAA
GACAAGGCATGCTGGAAGCTTCCCCAAGTGGATTTTCATGGGGGCTAAAT
TTTGAAAAATCACTAAAATTCCTCGCAATAATAATAAGGAACTTTGTATG
CCTTTTGGGGATTGGCTGGAAGGAGGCTACAGTCAATTGCCATGATGTTT
TTACATTTTATTCCTCTTGAATTTGCCAACCAACTGGCTTGACCTAAACC
TCTTTA
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