CX070098
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070098 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.920e-46 Identity = 87/95 (91.58%), Postives = 92/95 (96.84%), Query Frame = -1 Query: 486 MLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEGNATGSVDPNLA 770 MLASHTSIRHLFSKCLSQY+KLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDP+ ++TGEGNA+G VDP LA Sbjct: 379 MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPEQLMTGEGNASGVVDPKLA 473
BLAST of CX070098 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.773e-45 Identity = 85/95 (89.47%), Postives = 90/95 (94.74%), Query Frame = -1 Query: 486 MLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEGNATGSVDPNLA 770 MLASHTSIRHLFS+CLSQY+KLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDP ++TGEGNA+G DP LA Sbjct: 379 MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPGQLMTGEGNASGVADPKLA 473
BLAST of CX070098 vs. ExPASy Swiss-Prot
Match: TBG_PHYPA (Tubulin gamma chain OS=Physcomitrella patens GN=TUBG1 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.813e-40 Identity = 76/91 (83.52%), Postives = 85/91 (93.41%), Query Frame = -1 Query: 498 MLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEGNATGSVD 770 MLASHTSIRHLFSKC+SQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESR+I+++LVDEYKACES DYIKWGMED ++GEGN +G+VD Sbjct: 379 MLASHTSIRHLFSKCISQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESREIVQNLVDEYKACESADYIKWGMEDRGKQVSGEGNTSGTVD 469
BLAST of CX070098 vs. ExPASy Swiss-Prot
Match: TBG3_MAIZE (Tubulin gamma-3 chain (Fragment) OS=Zea mays GN=TUBG3 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.741e-39 Identity = 79/96 (82.29%), Postives = 83/96 (86.46%), Query Frame = -1 Query: 483 MLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEGNATGSVDPNLAV 770 MLA+HTSIRHLFSKCL QYEKLRKKQAFLDNYRKFPMFADNDLSEFDESR+IIESLVDEYKACESPDYIKWGMEDP GE N ++D L V Sbjct: 331 MLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESREIIESLVDEYKACESPDYIKWGMEDP-----GEANVVAALDSKLVV 421
BLAST of CX070098 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.741e-39 Identity = 79/96 (82.29%), Postives = 83/96 (86.46%), Query Frame = -1 Query: 483 MLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEGNATGSVDPNLAV 770 MLA+HTSIRHLFSKCL QYEKLRKKQAFLDNYRKFPMFADNDLSEFDESR+IIESLVDEYKACESPDYIKWGMEDP GE N ++D L V Sbjct: 379 MLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESREIIESLVDEYKACESPDYIKWGMEDP-----GEANVVAALDSKLVV 469
BLAST of CX070098 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.615e-39 Identity = 78/96 (81.25%), Postives = 81/96 (84.38%), Query Frame = -1 Query: 483 MLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEGNATGSVDPNLAV 770 MLA+HTSIRHLF KCL QYEKLRKKQAFLDNYRKFPMFADNDLSEFDESR+IIESLVDEYKACESPDYIKWGMEDP GE N +D L V Sbjct: 379 MLANHTSIRHLFGKCLGQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESREIIESLVDEYKACESPDYIKWGMEDP-----GEANVAADLDSKLVV 469
BLAST of CX070098 vs. ExPASy Swiss-Prot
Match: TBG2_ORYSJ (Tubulin gamma-2 chain OS=Oryza sativa subsp. japonica GN=TUBG2 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.287e-38 Identity = 77/96 (80.21%), Postives = 81/96 (84.38%), Query Frame = -1 Query: 483 MLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEGNATGSVDPNLAV 770 MLA+HTSIRHLFSKCL QYEKLRKKQAFLDNYRKFPMF DNDLSEFDESR+IIESLVDEYKACESPDYIKWGMED GE N ++D L V Sbjct: 379 MLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYKACESPDYIKWGMED-----AGEANVAAALDSKLVV 469
BLAST of CX070098 vs. ExPASy Swiss-Prot
Match: TBG_ANEPH (Tubulin gamma chain OS=Anemia phyllitidis GN=TUBG PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.353e-36 Identity = 70/84 (83.33%), Postives = 78/84 (92.86%), Query Frame = -1 Query: 519 MLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEG 770 MLASHTSIRHLFSKC++QYEKLRKKQAFLDNYRKFPMFADNDL+EFDESR+I++SLVDEYKACES DYIKWGMED L+ +G Sbjct: 380 MLASHTSIRHLFSKCINQYEKLRKKQAFLDNYRKFPMFADNDLTEFDESREIVQSLVDEYKACESADYIKWGMEDRSKTLSADG 463
BLAST of CX070098 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.585e-16 Identity = 40/77 (51.95%), Postives = 56/77 (72.73%), Query Frame = -1 Query: 540 MLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPD 770 MLA+HTS+ LF + L Q+++LRK+ AF++ Y+K MFA N L EFD++R + L+ EYKACESPDY+ +G D D Sbjct: 376 MLANHTSVASLFKRMLDQFDRLRKRNAFIEQYKKEKMFA-NGLEEFDDARATCDELLKEYKACESPDYVSFGGPDGD 451
BLAST of CX070098 vs. ExPASy Swiss-Prot
Match: TBG1_HUMAN (Tubulin gamma-1 chain OS=Homo sapiens GN=TUBG1 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.071e-16 Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = -1 Query: 546 MLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMED 770 M+A+HTSI LF + QY+KLRK++AFL+ +RK MF DN E D SR+I++ L+DEY A PDYI WG ++ Sbjct: 377 MMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDN-FDEMDTSREIVQQLIDEYHAATRPDYISWGTQE 450 The following BLAST results are available for this feature:
BLAST of CX070098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070098 ID=CX070098; Name=CX070098; organism=Citrus sinensis; type=EST; length=770bpback to top |