CX070093

Overview
NameCX070093
Unique NameCX070093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070093 vs. ExPASy Swiss-Prot
Match: PSBP_CUCSA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.933e-95
Identity = 172/201 (85.57%), Postives = 183/201 (91.04%), Query Frame = -1
Query:  196 IGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVFRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSFEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITAPVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 786
            IGAAA+GSKVSPADAAYGE+ANVFGKPK+NTD+LPY+GDGFKLSIPSKWNPSKEREFPGQV RYEDNFDSNSN+SVII PTDKKSI D+GSPEEFLSKVDYLLGKQAY GKT+ EGGFDPDAVATANILEA+        YYF+SVLTRTADGDEGGKHQLITA V  GKLYICKAQAGDKRWFKGARK+VE  ASSFSVA
Sbjct:   63 IGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNLSVIINPTDKKSIKDFGSPEEFLSKVDYLLGKQAYFGKTASEGGFDPDAVATANILEATASNVNGKDYYFVSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGARKFVEGAASSFSVA 263          
BLAST of CX070093 vs. ExPASy Swiss-Prot
Match: PSBP1_ARATH (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2)

HSP 1 Score: 338.576 bits (867), Expect = 2.386e-92
Identity = 163/201 (81.09%), Postives = 185/201 (92.04%), Query Frame = -1
Query:  196 IGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVFRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSFEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITAPVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 786
            +GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDFLPYNGDGFK+ +P+KWNPSKE E+PGQV R+EDNFD+ SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+ EGGFD +AVATANILE+S +     PYY+LSVLTRTADGDEGGKHQLITA V GGKLYICKAQAGDKRWFKGARK+VES A+SFSVA
Sbjct:   63 VGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVESAATSFSVA 263          
BLAST of CX070093 vs. ExPASy Swiss-Prot
Match: PSBP_SOLTU (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.710e-90
Identity = 163/201 (81.09%), Postives = 176/201 (87.56%), Query Frame = -1
Query:  196 IGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVFRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSFEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITAPVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 786
            IG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL IP+KWNPSKE EFPGQV RYEDNFDS SN+ V +TPTDKKSITDYGSPEEFLSKVDYLLGKQAY GKT  EGGF+  AVATAN+LEAS        YY+LSVLTRTADGDEGGKHQLITA V  GKLYICKAQAGDKRWFKGA+K+VE+ A+SFS+A
Sbjct:   60 IGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVLRYEDNFDSTSNLMVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSEGGFESGAVATANLLEASSATVGGKQYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENAATSFSIA 260          
BLAST of CX070093 vs. ExPASy Swiss-Prot
Match: PSBP_PEA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum GN=PSBP PE=1 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.710e-90
Identity = 165/201 (82.09%), Postives = 178/201 (88.56%), Query Frame = -1
Query:  196 IGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVFRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSFEGGFDPDAVATANILEASV----RPPYYFLSVLTRTADGDEGGKHQLITAPVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 786
            IGAAAVGSKVSPADAAYGE+ANVFGK KTNTD+LPYNGDGFKL +P+KWNPSKEREFPGQV RYEDNFD+ SNVSV++  TDKKSITDYGSPEEFLSKVDYLLGKQA+ G+T  EGGFD +AVA ANILE+S        YY +SVLTRTADGDEGGKHQLITA VK GKLYICKAQAGDKRWFKGARK+VE TASSFSVA
Sbjct:   59 IGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPGQVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGFDTNAVAVANILESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDGKLYICKAQAGDKRWFKGARKFVEDTASSFSVA 259          
BLAST of CX070093 vs. ExPASy Swiss-Prot
Match: PSBP_SOLLC (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.469e-89
Identity = 160/201 (79.60%), Postives = 175/201 (87.06%), Query Frame = -1
Query:  196 IGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVFRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSFEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITAPVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 786
            IG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL +P+KWNPSKE E+PGQV RYEDNFDS SN+ V +TPTDKKSITDYGSPEEFLSKVDYLLGKQAY GKT  EGGF+  AVAT N+LEAS        YY+LSVLTRTADGDEGGKHQLITA V  GKLYICKAQAGDKRWFKGA+K+VE+ A+SFS+A
Sbjct:   58 IGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVLRYEDNFDSTSNLIVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSEGGFESGAVATRNLLEASSATVGGKEYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENAATSFSIA 258          
BLAST of CX070093 vs. ExPASy Swiss-Prot
Match: PSBP1_TOBAC (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2)

HSP 1 Score: 325.865 bits (834), Expect = 1.601e-88
Identity = 160/201 (79.60%), Postives = 175/201 (87.06%), Query Frame = -1
Query:  196 IGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVFRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSFEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITAPVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 786
            IGAAA+GSKVSPADAAYGE+ANVFGKPK NTDFL YNGDGFKL +P+KWNPSKE EFPGQV RYEDNFDS SN+ V +TPTDKKSITDYGSPEEFL++VD+LLGKQAY GKT  EGGF+  AVATAN+LE S        YY LSVLTRTADGDEGGKHQLI+A V GGKLYICKAQAGDKRWFKGARK+VE+ A+SFSVA
Sbjct:   68 IGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTDKKSITDYGSPEEFLTQVDFLLGKQAYFGKTDSEGGFESGAVATANLLETSSSTVGGKEYYILSVLTRTADGDEGGKHQLISATVNGGKLYICKAQAGDKRWFKGARKFVENAATSFSVA 268          
BLAST of CX070093 vs. ExPASy Swiss-Prot
Match: PSBP_SINAL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2)

HSP 1 Score: 325.094 bits (832), Expect = 2.730e-88
Identity = 155/201 (77.11%), Postives = 180/201 (89.55%), Query Frame = -1
Query:  196 IGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVFRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSFEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITAPVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 786
            +GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF  Y+GDGF++ +P+KWNPS+E E+PGQV RYEDNFD+ SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+ EGGFD +AVATANILE +++     PYY+LSVLTRTADGDEGGKHQLITA V GGKLYICKAQAGDKRWFKGA K+VE  A+SFSVA
Sbjct:   60 VGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 260          
BLAST of CX070093 vs. ExPASy Swiss-Prot
Match: PSBP2_TOBAC (Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum GN=PSBP2 PE=1 SV=2)

HSP 1 Score: 325.094 bits (832), Expect = 2.730e-88
Identity = 159/201 (79.10%), Postives = 178/201 (88.56%), Query Frame = -1
Query:  196 IGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVFRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSFEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITAPVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 786
            IGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF  YNGDGFKL IPSKWNP+KE E+PGQV R+EDNFD+ SNV V ITPTDKKSITD+GSPE+FLS+VDYLLG+QAYSGKT  EGGF+ DAVA AN+LE S       PYY+LSVLTRTADG+EGGKHQLITA V  GKLYICKAQAGDKRWFKGA+K+VE+TA+SFS+A
Sbjct:   65 IGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDSEGGFESDAVAIANVLETSSAEVGGKPYYYLSVLTRTADGNEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENTATSFSLA 265          
BLAST of CX070093 vs. ExPASy Swiss-Prot
Match: PSBP_SPIOL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 7.943e-88
Identity = 156/201 (77.61%), Postives = 176/201 (87.56%), Query Frame = -1
Query:  196 IGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVFRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSFEGGFDPDAVATANILEASV----RPPYYFLSVLTRTADGDEGGKHQLITAPVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 786
            IGAAAVGSKVSPADAAYGE+ANVFGKPK NT+F+PYNGDGFKL +PSKWNPSKE+EFPGQV RYEDNFD+ SN+SV++ PTDKKSITD+GSPE+FLS+VDYLLGKQAY GKT  EGGFD   VA+AN+LE+S        YY ++VLTRTADGDEGGKHQ+I A VK GKLYICKAQAGDKRWFKGA+K+VES  SSFSVA
Sbjct:   67 IGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDSEGGFDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICKAQAGDKRWFKGAKKFVESATSSFSVA 267          
BLAST of CX070093 vs. ExPASy Swiss-Prot
Match: PSBP_BRAJU (Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.037e-87
Identity = 155/201 (77.11%), Postives = 179/201 (89.05%), Query Frame = -1
Query:  196 IGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVFRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSFEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITAPVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 786
            +GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDF   NGDGF++ +P+KWNPS+E E+PGQV RYEDNFD+ SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+ EGGFD +AVATANILE +++     PYY+LSVLTRTAD DEGGKHQLITA V GGKLYICKAQAGDKRWFKGA K+VE  A+SFSVA
Sbjct:   17 VGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETACEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADEDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 217          
The following BLAST results are available for this feature:
BLAST of CX070093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PSBP_CUCSA3.933e-9585.57Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP1_ARATH2.386e-9281.09Oxygen-evolving enhancer protein 2-1, chloroplasti... [more]
PSBP_SOLTU1.710e-9081.09Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_PEA1.710e-9082.09Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_SOLLC2.469e-8979.60Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP1_TOBAC1.601e-8879.60Oxygen-evolving enhancer protein 2-1, chloroplasti... [more]
PSBP_SINAL2.730e-8877.11Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP2_TOBAC2.730e-8879.10Oxygen-evolving enhancer protein 2-2, chloroplasti... [more]
PSBP_SPIOL7.943e-8877.61Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_BRAJU1.037e-8777.11Oxygen-evolving enhancer protein 2, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14G01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14G01-M2-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070093 ID=CX070093; Name=CX070093; organism=Citrus sinensis; type=EST; length=786bp
TTTTTTTTTTTTTTTTTAACAGCTATACAAGAGGGCCCTTATATGCCATT
AAATACTCAAATATCCACAAGCTTTTTCCAACCAACTCCTTCAATTAAAA
ACTCAAAAGCTTTTGGGGAAAGATGGGAGTAGATAATTCAAAACAAACAG
CATACATTAAGTTGGATTTACATAAAAATTCTGATTAATGTCTCAAGCAA
CACTGAAAGAACTGGCAGTGCTTTCCACATACTTTCTTGCTCCCTTAAAC
CACCTCTTGTCTCCAGCTTGGGCCTTGCAAATGTAAAGCTTGCCACCTTT
AACCGGGGCTGTAATTAGTTGATGCTTGCCACCTTCATCTCCATCAGCAG
TTCTTGTTAATACAGACAAAAAGTAGTATGGGGGTCGGACTGAAGCCTCC
AAGATGTTAGCTGTTGCCACAGCATCAGGGTCGAAACCACCCTCAAACGA
AGTTTTGCCGGAATAGGCTTGTTTTCCCAGCAAGTAGTCCACCTTACTGA
GGAATTCCTCGGGGGAACCGTAGTCAGTGATGGATTTCTTGTCAGTTGGG
GTGATTATGACGGAAACATTGCTGTTGGAATCGAAGTTGTCTTCGTATCT
AAAAACCTGACCCGGGAACTCTCTCTCTTTGCTGGGGTTCCATTTTGAGG
GAATCGACAGCTTGAATCCATCTCCATTGTATGGCAAGAAGTCAGTGTTG
GTCTTTGGCTTACCAAACACATTGGCTGATTCACCGTAGGCAGCGTCGGC
AGGAGAGACCTTGGAGCCGACGGCAGCAGCACCAAT
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