CX070032
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX070032 vs. ExPASy Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.820e-32 Identity = 70/86 (81.40%), Postives = 73/86 (84.88%), Query Frame = -3 Query: 3 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETKK 260 DD TRE+P GHCLVAGIKK P KVI KDSAKKTAK SRVKAFVKLV+YQHLMPTRYTLDVDLK V D LQSKDKK+ A KETKK Sbjct: 30 DDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKK 115
BLAST of CX070032 vs. ExPASy Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 1.926e-30 Identity = 65/85 (76.47%), Postives = 71/85 (83.53%), Query Frame = -3 Query: 6 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETK 260 DD R+RP GHCLVAG+KK P KVI KDSAKKTAK SRVK F+KLV+YQHLMPTRYTLDVDLK V T D+LQSKDKK+ A KE K Sbjct: 30 DDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAK 114
BLAST of CX070032 vs. ExPASy Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 8.093e-29 Identity = 63/85 (74.12%), Postives = 70/85 (82.35%), Query Frame = -3 Query: 6 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETK 260 DD T +R GHCLVAG+KK P KVI KDSAKKTAK SRVK F+KLV+YQHLMPTRYTLDVDLK V T D+L+SKDKK+ A KE K Sbjct: 30 DDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAK 114
BLAST of CX070032 vs. ExPASy Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.400e-27 Identity = 59/85 (69.41%), Postives = 70/85 (82.35%), Query Frame = -3 Query: 6 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETK 260 DD T E+ GHCLVAG+KK P KVI KDSAKKTAK SRVK F K+++YQH+MPTRYTLD+DLK VV+AD++ SKDKK+ A KE K Sbjct: 30 DDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAK 114
BLAST of CX070032 vs. ExPASy Swiss-Prot
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.746e-23 Identity = 56/84 (66.67%), Postives = 65/84 (77.38%), Query Frame = -3 Query: 21 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDL----KVVVTADSLQSKDKKMIA 260 D+ TR+RP GHCLVAGI + P KVI KDSAKK K SRVKAF+KLV+Y H+MPTRYTLD DL K VV AD LQ++DKK+ A Sbjct: 30 DEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA 113
BLAST of CX070032 vs. ExPASy Swiss-Prot
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.442e-17 Identity = 47/86 (54.65%), Postives = 58/86 (67.44%), Query Frame = -3 Query: 3 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETKK 260 DD T RP GH LV G++K P KV + S KK AK S +K F+K V+Y HLMPTRYTLDVD K V A++ ++ KK+ A KE KK Sbjct: 30 DDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFK-GVAAEAQENPTKKVEARKECKK 114
BLAST of CX070032 vs. ExPASy Swiss-Prot
Match: RL27B_YEAST (60S ribosomal protein L27-B OS=Saccharomyces cerevisiae GN=RPL27B PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.985e-15 Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = -3 Query: 3 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKK 260 D+ ++ P GH LVAGI++ P KV K AKK AK +++K F+K+V+Y HL+PTRYTLDV+ K VV+ ++ + ++ A K KK Sbjct: 30 DEGSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKK 116
BLAST of CX070032 vs. ExPASy Swiss-Prot
Match: RL27A_YEAST (60S ribosomal protein L27-A OS=Saccharomyces cerevisiae GN=RPL27A PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.686e-15 Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = -3 Query: 3 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKK 260 D+ ++ P GH LVAGI++ P KV K AKK AK +++K F+K+V+Y HL+PTRYTLDV+ K VV+ ++ + ++ A K KK Sbjct: 30 DEGSKSHPFGHALVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKK 116
BLAST of CX070032 vs. ExPASy Swiss-Prot
Match: RL27_CANAL (60S ribosomal protein L27 OS=Candida albicans GN=RPL27 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.935e-14 Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = -3 Query: 3 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKK 260 D+ T+ P H +VAGI++ P KV K AKK K ++VK FVKLV+Y HLMPTRY+LDV+ K VT+++L+ ++ A K KK Sbjct: 30 DEGTKSHPFPHAIVAGIERAPLKVTKKMDAKKVTKRTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKK 116
BLAST of CX070032 vs. ExPASy Swiss-Prot
Match: RL27A_SCHPO (60S ribosomal protein L27-A OS=Schizosaccharomyces pombe GN=rpl27a PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.301e-14 Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = -3 Query: 3 DDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKK 260 D ++ P GH +VAG+++ P KV AK+ A+ SRVK F+K+V+Y HLMPTRY L++D LK ++TAD+ + ++ A K KK Sbjct: 30 DQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKK 116 The following BLAST results are available for this feature:
BLAST of CX070032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070032 ID=CX070032; Name=CX070032; organism=Citrus sinensis; type=EST; length=262bpback to top |