CX070006

Overview
NameCX070006
Unique NameCX070006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8852 contig Csv1_Contig8852:266..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 410.994 bits (1055), Expect = 4.280e-114
Identity = 199/224 (88.84%), Postives = 213/224 (95.09%), Query Frame = -1
Query:  178 FLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 849
            FLYITVLTVMGV+ S +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FYMVMQCLGA+CGAGVVKGF+    YE  GGGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+N+ HAWDDHWIFWVGPFIGAALAA+YHQ+VIRAIPFKSR+
Sbjct:   66 FLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGL-YETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFKSRS 288          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 4.280e-114
Identity = 197/224 (87.95%), Postives = 215/224 (95.98%), Query Frame = -1
Query:  178 FLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 849
            FLYIT+LTVMGVSKS++KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY+VMQCLGA+CGAGVVKGF+    Y   GGGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+NKDHAW+DHWIFWVGPF+GAALAA+YHQ++IRAIPFKSR+
Sbjct:   67 FLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGL-YMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKSRS 289          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 1.626e-113
Identity = 197/224 (87.95%), Postives = 213/224 (95.09%), Query Frame = -1
Query:  178 FLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 849
            FLYITVLTVMGVSKS +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY++MQCLGA+CGAGVVKGF+    Y   GGGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+N+DHAW DHWIFWVGPFIGAALAA+YHQ++IRAIPFKSR+
Sbjct:   70 FLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGL-YMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFKSRS 292          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 1.626e-113
Identity = 199/224 (88.84%), Postives = 213/224 (95.09%), Query Frame = -1
Query:  178 FLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 849
            FLYITVLTVMGV ++   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAVFY+VMQCLGA+CGAGVVKGF+ +  Y+ LGGGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+NKDHAWDDHWIFWVGPFIGAALAA+YHQ+VIRAIPFKSR+
Sbjct:   64 FLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNP-YQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKSRS 286          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 1.626e-113
Identity = 199/224 (88.84%), Postives = 212/224 (94.64%), Query Frame = -1
Query:  178 FLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 849
            FLYITVLTVMGV +S   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAV+Y+VMQCLGA+CGAGVVKGF+  K Y+ LGGGAN +AHGYTKG GLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKD+AWDDHW+FWVGPFIGAALAA+YH IVIRAIPFKSR+
Sbjct:   64 FLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFKSRS 286          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 408.683 bits (1049), Expect = 2.124e-113
Identity = 198/224 (88.39%), Postives = 213/224 (95.09%), Query Frame = -1
Query:  178 FLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 849
            FLYITVLTVMGV ++   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAVFYM+MQCLGA+CGAGVVKGF+ +  Y+ LGGGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+NKDH+WDDHWIFWVGPFIGAALAA+YHQIVIRAIPFKS++
Sbjct:   65 FLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTP-YQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKSKS 287          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 408.683 bits (1049), Expect = 2.124e-113
Identity = 197/224 (87.95%), Postives = 214/224 (95.54%), Query Frame = -1
Query:  178 FLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 849
            FLYIT+LTVMGVSKS +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY++MQCLGAVCGAGVVKGF+    Y   GGGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+N+DHAW+DHWIFWVGPFIGAALAA+YHQ++IRAIPFKSR+
Sbjct:   67 FLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGL-YMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKSRS 289          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 2.774e-113
Identity = 197/224 (87.95%), Postives = 212/224 (94.64%), Query Frame = -1
Query:  178 FLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 849
            FLYITVLTVMGV +S   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA++Y+VMQCLGA+CGAGVVKGF+  K Y+ LGGGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+NKDH+WDDHW+FWVGPFIGAALAA+YH +VIRAIPFKSR+
Sbjct:   64 FLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKSRS 286          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 2.774e-113
Identity = 197/224 (87.95%), Postives = 212/224 (94.64%), Query Frame = -1
Query:  178 FLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 849
            FLYITVLTVMGV +S   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA++Y+VMQCLGA+CGAGVVKGF+  K Y+ LGGGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+NKDH+WDDHW+FWVGPFIGAALAA+YH +VIRAIPFKSR+
Sbjct:   64 FLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKSRS 286          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 404.445 bits (1038), Expect = 4.006e-112
Identity = 196/223 (87.89%), Postives = 211/223 (94.62%), Query Frame = -1
Query:  181 FLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSR 849
            FLY+TVLTVMGV ++   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY+VMQCLGA+CGAGVVKGF+    Y+  GGGANVVAHGYTKG GLGAEI+GTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+NKDHAWDDHWIFWVGPFIGAALAA+YHQIVIRAIPFKS+
Sbjct:   65 FLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGL-YQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKSK 286          
The following BLAST results are available for this feature:
BLAST of CX070006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
PIP12_ORYSJ4.280e-11488.84Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP11_ORYSJ4.280e-11487.95Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP13_MAIZE1.626e-11387.95Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP13_ARATH1.626e-11388.84Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP12_ARATH1.626e-11388.84Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP14_ARATH2.124e-11388.39Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP12_MAIZE2.124e-11387.95Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP11_VICFA2.774e-11387.95Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH2.774e-11387.95Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP15_ARATH4.006e-11287.89Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C02-E4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070006 ID=CX070006; Name=CX070006; organism=Citrus sinensis; type=EST; length=849bp
CTTTTTTTTGAATCCTCCAATCAAAAGCTTAAAAAAAAAAAATACAGCAA
TGCTAGATAATTTACACACAATTAATTAACATCTTAAACAGTTAAACACC
AAATGCACATAAACAAAAAGACACGACAAAGAAGATACAAATTAAAAAAA
AAAAAGGTCCATCAGTGAACTCTCTTAAGCCCTGGACTTGAAGGGAATGG
CCCTGATGACTATCTGGTGGTACACAGCAGCCAGTGCAGCTCCAATGAAT
GGTCCAACCCAGAAGATCCAATGGTCATCCCAGGCATGGTCTTTGTTGAA
GATGATGGCAGCTCCAAGACTCCTAGCTGGGTTGATGCCAGTTCCTGTGA
TGGGGATGGTGGCCAGGTGGACCAAGAAAACAGCAAATCCAATGGGGAGG
GGGGCCAAAATAGGGACATGAGAGTCTCTGGCGTTTCTCTTCGCATCAGT
GGCAGAGAAGACAGTGTAAACAAGAACAAAGGTTCCAATAATCTCAGCAC
CAAGACCATCACCCTTGGTGTAGCCGTGAGCAACAACATTGGCTCCACCA
CCCAACCTCTCGTAGTTCTTTGAACCTTCGAATCCCTTGACAACACCAGC
ACCACAGACAGCACCAAGGCACTGCATGACCATGTAGAAGACAGCCCTTG
TCAGGGAAAGCTTCCTCGCTAGCAGCAGACCGAAGGTCACTGCTGGGTTG
ATGTGTCCTCCTGAGATACCAGCAGTGCAGTAAACAAGCGCAAAGATCAT
GCCACCAAAGGCCCAAGCAATTCCTTGGATACCGACAGTGGAGCACTTGG
TGTTAGACTTAGAGACACCCATGACAGTCAAGACAGTGATGTAGAGGAA
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