DR404155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404155 vs. ExPASy Swiss-Prot
Match: ARPC4_DICDI (Actin-related protein 2/3 complex subunit 4 OS=Dictyostelium discoideum GN=arcD PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 6.122e-61 Identity = 113/168 (67.26%), Postives = 141/168 (83.93%), Query Frame = 3 Query: 102 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKHKLIDFIAQFMEDIDKEISELKMSVNTRGRLVATEYLKQF 605 MS YL CIRNTL A++CLQNF Q VERHNKPEVE+KTS EL+LNP++I RN+ E+ LIETSINS+RIS+ +K++DE++ IL KKF+RFL RAE F +LRRKPV+GYDISFL+TN+H E M KHKL+DFI QFMEDID+EIS+LK+++N RGR+VA+EYLK F Sbjct: 1 MSTAQVPYLNCIRNTLTASMCLQNFGSQIVERHNKPEVEVKTSKELVLNPVIIARNKNERVLIETSINSIRISVSIKKSDEVDVILAKKFVRFLQQRAENFIILRRKPVEGYDISFLVTNFHTENMFKHKLVDFIIQFMEDIDREISDLKLTLNARGRIVASEYLKNF 168
BLAST of DR404155 vs. ExPASy Swiss-Prot
Match: ARPC4_MOUSE (Actin-related protein 2/3 complex subunit 4 OS=Mus musculus GN=Arpc4 PE=1 SV=3) HSP 1 Score: 231.491 bits (589), Expect = 3.968e-60 Identity = 113/168 (67.26%), Postives = 138/168 (82.14%), Query Frame = 3 Query: 102 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKHKLIDFIAQFMEDIDKEISELKMSVNTRGRLVATEYLKQF 605 M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN+H E+M KHKL+DF+ FME+IDKEISE+K+SVN R R+VA E+LK F Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
BLAST of DR404155 vs. ExPASy Swiss-Prot
Match: ARPC4_HUMAN (Actin-related protein 2/3 complex subunit 4 OS=Homo sapiens GN=ARPC4 PE=1 SV=3) HSP 1 Score: 231.491 bits (589), Expect = 3.968e-60 Identity = 113/168 (67.26%), Postives = 138/168 (82.14%), Query Frame = 3 Query: 102 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKHKLIDFIAQFMEDIDKEISELKMSVNTRGRLVATEYLKQF 605 M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN+H E+M KHKL+DF+ FME+IDKEISE+K+SVN R R+VA E+LK F Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
BLAST of DR404155 vs. ExPASy Swiss-Prot
Match: ARPC4_BOVIN (Actin-related protein 2/3 complex subunit 4 OS=Bos taurus GN=ARPC4 PE=1 SV=3) HSP 1 Score: 231.491 bits (589), Expect = 3.968e-60 Identity = 113/168 (67.26%), Postives = 138/168 (82.14%), Query Frame = 3 Query: 102 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKHKLIDFIAQFMEDIDKEISELKMSVNTRGRLVATEYLKQF 605 M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN+H E+M KHKL+DF+ FME+IDKEISE+K+SVN R R+VA E+LK F Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
BLAST of DR404155 vs. ExPASy Swiss-Prot
Match: ARPC4_SCHPO (Actin-related protein 2/3 complex subunit 4 OS=Schizosaccharomyces pombe GN=arc4 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.844e-55 Identity = 103/168 (61.31%), Postives = 135/168 (80.36%), Query Frame = 3 Query: 102 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKHKLIDFIAQFMEDIDKEISELKMSVNTRGRLVATEYLKQF 605 MSNTLR YL +R+TL A+L L+ F + VER ++PEVE+ SPE+LL P+++ RNE E+CLIE+S+NS+R S+++KQ DE+E IL +KF++FL RAE+F +LRRKPVQGYDISFLITNYH EEM KHKL+DFI +FME++D EISE+K+ +N R RLVA YL F Sbjct: 1 MSNTLRPYLNAVRSTLTASLALEEFSSEIVERQSQPEVEVGRSPEILLKPLVVSRNEQEQCLIESSVNSVRFSIRIKQVDEIERILVRKFMQFLMGRAESFFILRRKPVQGYDISFLITNYHTEEMLKHKLVDFIIEFMEEVDAEISEMKLFLNGRARLVAETYLSCF 168
BLAST of DR404155 vs. ExPASy Swiss-Prot
Match: ARPC4_CAEEL (Probable actin-related protein 2/3 complex subunit 4 OS=Caenorhabditis elegans GN=arx-6 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.598e-53 Identity = 101/168 (60.12%), Postives = 132/168 (78.57%), Query Frame = 3 Query: 102 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKHKLIDFIAQFMEDIDKEISELKMSVNTRGRLVATEYLKQF 605 MS TL+ YL +R+TL AALCL+ F Q VERHNKPEVE++TS ELL+ P+++ RN+ E+ LIE S+NS+RIS+ +KQ+DE+E IL KF RF+ RA+ F VLRRKP+ GYDISFLIT H E M KHKL+DF+ FM++IDKEISE+K+S+N R R+ A E+LK+F Sbjct: 1 MSATLQPYLEAVRHTLQAALCLEQFSSQVVERHNKPEVEVQTSKELLMTPVVVARNKQERVLIEPSVNSVRISIAIKQSDEIEKILCHKFTRFMCQRADNFFVLRRKPLPGYDISFLITASHTEAMFKHKLVDFLLHFMQEIDKEISEMKLSLNARARVSAEEFLKRF 168
BLAST of DR404155 vs. ExPASy Swiss-Prot
Match: ARPC4_YEAST (Actin-related protein 2/3 complex subunit 4 OS=Saccharomyces cerevisiae GN=ARC19 PE=1 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 5.195e-52 Identity = 106/170 (62.35%), Postives = 128/170 (75.29%), Query Frame = 3 Query: 102 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVEL-KTSPELLLNPILICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKHKLIDFIAQFMEDIDKEISELKMSVNTRGRLVATEYLKQFV 608 MS +LR YL +R +L+AAL L NF QEVERHN+PEVE+ TS ELLL P+ I RNE E+ LIE S+NS+R+SL VKQADE+E IL KF RFL RAEAF +LRR P+ GY ISFLITN H E M+ KL+DFI +FMED+DKEISE+K+ +N R R VA YL +FV Sbjct: 1 MSQSLRPYLTAVRYSLEAALTLSNFSSQEVERHNRPEVEVPNTSAELLLQPMHISRNENEQVLIEPSVNSVRMSLMVKQADEIEQILVHKFTRFLEQRAEAFYILRRVPIPGYSISFLITNKHTESMKTGKLVDFIIEFMEDVDKEISEIKLFLNARARFVAEAYLDEFV 170 The following BLAST results are available for this feature:
BLAST of DR404155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR404155 ID=DR404155; Name=DR404155; organism=Citrus sinensis; type=EST; length=775bpback to top |