DR404152

Overview
NameDR404152
Unique NameDR404152
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404152 vs. ExPASy Swiss-Prot
Match: CAF17_USTMA (Putative transferase CAF17, mitochondrial OS=Ustilago maydis GN=CAF17 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.330e-19
Identity = 62/226 (27.43%), Postives = 100/226 (44.25%), Query Frame = 1
Query:   55 LTTPNLPYESASPVYAALLTPQGKFLYDLFLYAPPPPEEKLDRTGWSGPSSGSHDRSVEVFADVDGSVLDELLHTFKKYRLRSKVEIENVAEDFSCWQRFGGKLXXXXXXXXXXXXXXVGWGTGVDRAGMSASHGNDVGWQWFKDPRLDCLGFRGIFKSSGIPPLVEADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDXXCYVGQELIAR 732
            L +  L ++  + VYA  + PQG+ L D+F++  P                 + D S     D+D   L  L+   KK++LRSKV++ +++ D+   Q                      W +        A        +   DPR   +G+RG+  ++ I  +  A    D + Y L R+  GVAEG+ + P+  ++PLE NL  ++ + F   CYVGQEL AR
Sbjct:   83 LDSTTLTHQPPNMVYAGFMNPQGRMLADVFIHRQP----------------ANQDGSPRWLLDIDSRTLPSLVAFIKKFKLRSKVKLTDLSTDYHVVQ---------------------AWDSNSQAPPTIAE-------KLSIDPRSPSIGYRGVLSAAEILDVAAAASTVDGLEYTLHRITNGVAEGALDFPQASSLPLENNLDYMHGVDFRKGCYVGQELTAR 264          
BLAST of DR404152 vs. ExPASy Swiss-Prot
Match: CA069_HUMAN (Putative transferase C1orf69, mitochondrial OS=Homo sapiens GN=C1orf69 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13
Identity = 70/233 (30.04%), Postives = 93/233 (39.91%), Query Frame = 1
Query:   46 TSTLTTPNLPYESASPV----YAALLTPQGKFLYDLFLYAPPPPEEKLDRTGWSGPSSGSHDRSVEVFADVDGSVLDELLHTFKKYRLRSKVEIENVAEDFSCWQRFGGKLXXXXXXXXXXXXXXVGWGTGVDRAGMSASHGNDVGWQWFKDPRLDCLGFRGIFKSSGIPPLVEADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDXXCYVGQELIAR 732
            T+ L  P+     A P     YA  L  QG+ LYD+ LY                     H        + D SV   L      YR+R KV +E   E    W                      G  +  +RAG +A           +DPR   +G+R + +  G P LV   +  D  +Y   R  QGV EG  ++P G A+PLE NLA +N +SF   CY+GQEL AR
Sbjct:   75 TNELPLPSPAAAGAPPAARAGYAHFLNVQGRTLYDVILYGLQ-----------------EHSEVSGFLLECDSSVQGALQKHLALYRIRRKVTVEPHPE-LRVWAVLPSS------------PEACGAASLQERAGAAAI--------LIRDPRTARMGWRLLTQDEG-PALVPGGRLGDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELTAR 268          
BLAST of DR404152 vs. ExPASy Swiss-Prot
Match: CA069_MOUSE (Putative transferase C1orf69 homolog, mitochondrial OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13
Identity = 66/217 (30.41%), Postives = 88/217 (40.55%), Query Frame = 1
Query:   82 SASPVYAALLTPQGKFLYDLFLYAPPPPEEKLDRTGWSGPSSGSHDRSVEVFADVDGSVLDELLHTFKKYRLRSKVEIENVAEDFSCWQRFGGKLXXXXXXXXXXXXXXVGWGTGVDRAGMSASHGNDVGWQWFKDPRLDCLGFRGIFKSSGIPPLVEADKETDEMNYLLCRLEQGVAEGSTEIPKGEAMPLEYNLAGLNAISFDXXCYVGQELIAR 732
            SA   YA  L  QG+ LYD+ LY  P   E         PS            + D SVL  L      Y++R KV +E   E    W      L                 GT +                  +DPR   +G+R + +  G P LV   +  D  +Y   R +QG+ EG  ++P G A+PLE NL  +N +SF   CY+GQEL AR
Sbjct:   91 SARAAYAHFLNVQGRTLYDVILYGLPECTE-------GAPS---------FLLECDSSVLGALQKHLSMYKIRRKVTVEPSPE-LHVW----AVLPCVPQTSETAPLEERVEGTTM----------------LIRDPRTARMGWRLLTQDDG-PALVPRGQLGDLQDYHKYRYQQGIPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTAR 269          
The following BLAST results are available for this feature:
BLAST of DR404152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CAF17_USTMA5.330e-1927.43Putative transferase CAF17, mitochondrial OS=Ustil... [more]
CA069_HUMAN2.562e-1330.04Putative transferase C1orf69, mitochondrial OS=Hom... [more]
CA069_MOUSE4.370e-1330.41Putative transferase C1orf69 homolog, mitochondria... [more]
back to top
Properties
Property NameValue
Genbank descriptionCSAG-PNP1245G23 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245G23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404152 ID=DR404152; Name=DR404152; organism=Citrus sinensis; type=EST; length=732bp
GGGGATGTGCGCAAGTTCGGTGAACCCGCGGGTAAGAGAGAAAAAACGTC
AACGTTGACGACGCCGAATTTGCCTTACGAGTCTGCTTCGCCGGTTTACG
CGGCGTTGTTGACTCCTCAGGGGAAGTTTTTGTACGACTTGTTCTTGTAT
GCCCCGCCTCCGCCCGAGGAGAAGCTGGACCGGACGGGGTGGTCTGGACC
TAGCTCAGGCTCTCATGATCGGTCGGTCGAGGTGTTTGCTGACGTTGATG
GGTCGGTGTTGGACGAGTTACTGCACACTTTTAAGAAATACCGGTTGAGA
TCTAAGGTTGAGATTGAGAATGTTGCGGAAGACTTTTCTTGCTGGCAGCG
TTTTGGCGGAAAGCTATCTGAGAACTCTTCTTCTGCAGAAGAACCAGAGG
CTGCCGCAGTTGGCTGGGGTACTGGCGTTGATCGTGCTGGCATGTCAGCT
TCACATGGTAATGATGTTGGATGGCAATGGTTTAAGGATCCTCGATTGGA
TTGTCTTGGATTTAGAGGAATCTTCAAATCTAGTGGAATACCACCTCTCG
TTGAGGCTGACAAAGAAACCGATGAGATGAATTATCTTTTATGCAGATTA
GAGCAGGGAGTTGCCGAAGGCTCAACTGAAATACCAAAAGGGGAAGCAAT
GCCGCTAGAATACAATCTTGCTGGTCTAAATGCAATAAGCTTTGACAANN
NTTGTTATGTCGGTCAAGAGTTAATAGCTCGC
back to top