DR404143

Overview
NameDR404143
Unique NameDR404143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404143 vs. ExPASy Swiss-Prot
Match: AMERL_ARATH (Uncharacterized protein At2g38710 OS=Arabidopsis thaliana GN=At2g38710 PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.542e-90
Identity = 152/189 (80.42%), Postives = 178/189 (94.18%), Query Frame = 2
Query:  173 MVSANREMAVYCFDTLVAHYNSEDAPPPAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQSTLFALHYSD 739
            MVSANREMAVYCFDTLV+HYN+E+ PPPAF+E  HPLFVTWKK+VNGGEPRLRGCIGTLEAR LI+GFKDYALTSAL+DRRFPPIQA+ELPSL+CTVS+LTD+E A +YLDWEVG HG+IIEFT+PE +T+RSATYLPEV AHEGWTK+EAIDSL+RKAG++G ITE++R+RI LTRYQSTLF++HYS+
Sbjct:    1 MVSANREMAVYCFDTLVSHYNNEETPPPAFEEANHPLFVTWKKIVNGGEPRLRGCIGTLEARRLISGFKDYALTSALRDRRFPPIQAKELPSLQCTVSVLTDYEDAEDYLDWEVGKHGIIIEFTEPETNTKRSATYLPEVPAHEGWTKIEAIDSLVRKAGYNGVITEAVRRRINLTRYQSTLFSMHYSE 189          
BLAST of DR404143 vs. ExPASy Swiss-Prot
Match: AMERL_PONAB (AMMECR1-like protein OS=Pongo abelii GN=AMMECR1L PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.554e-49
Identity = 97/184 (52.72%), Postives = 122/184 (66.30%), Query Frame = 2
Query:  191 EMAVYCFDTLVAH-YNSEDAPPPAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQSTLFALHYSD 739
            EM  YCFD L  H Y       P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++Y LTSALKD RFPP+   ELP L C+VS+LT+FE A++YLDWEVG HG+ IEF + E   +R+ATYLPEVA  + W +++ IDSL+RK GF  PIT   RK I+LTRY+S    + Y++
Sbjct:  107 EMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWK---TGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFIN-EKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVTISYAE 286          
BLAST of DR404143 vs. ExPASy Swiss-Prot
Match: AMERL_HUMAN (AMMECR1-like protein OS=Homo sapiens GN=AMMECR1L PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.554e-49
Identity = 97/184 (52.72%), Postives = 122/184 (66.30%), Query Frame = 2
Query:  191 EMAVYCFDTLVAH-YNSEDAPPPAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQSTLFALHYSD 739
            EM  YCFD L  H Y       P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++Y LTSALKD RFPP+   ELP L C+VS+LT+FE A++YLDWEVG HG+ IEF + E   +R+ATYLPEVA  + W +++ IDSL+RK GF  PIT   RK I+LTRY+S    + Y++
Sbjct:  107 EMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWK---TGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFIN-EKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVTISYAE 286          
BLAST of DR404143 vs. ExPASy Swiss-Prot
Match: AMERL_MOUSE (AMMECR1-like protein OS=Mus musculus GN=Ammecr1l PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.560e-49
Identity = 97/184 (52.72%), Postives = 122/184 (66.30%), Query Frame = 2
Query:  191 EMAVYCFDTLVAH-YNSEDAPPPAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQSTLFALHYSD 739
            EM  YCFD L  H Y       P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++Y LTSALKD RFPP+   ELP L C+VS+LT+FE A++YLDWEVG HG+ IEF + E   +R+ATYLPEVA  + W +++ IDSL+RK GF  PIT   RK I+LTRY+S    + Y++
Sbjct:  107 EMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWK---TGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFIN-EKGIKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKSIKLTRYRSEKVTISYAE 286          
BLAST of DR404143 vs. ExPASy Swiss-Prot
Match: AMER1_PONAB (AMME syndrome candidate gene 1 protein homolog OS=Pongo abelii GN=AMMECR1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.246e-48
Identity = 96/184 (52.17%), Postives = 122/184 (66.30%), Query Frame = 2
Query:  191 EMAVYCFDTLVAH-YNSEDAPPPAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQSTLFALHYSD 739
            EM  +CFD L  H Y  +    P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++Y LTSALKD RFPP+   ELP L C+VS+LT+FE   +YLDWEVG HG+ IEF + E  ++R+ATYLPEVA  +GW  ++ IDSL+RK G+  PIT   RK I+LTRY+S    L Y++
Sbjct:  129 EMCCFCFDVLYCHLYGYQQPRTPRFTNEPYPLFVTWKI---GRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIRIEFIN-EKGSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRSEKMTLSYAE 308          
BLAST of DR404143 vs. ExPASy Swiss-Prot
Match: AMER1_MOUSE (AMME syndrome candidate gene 1 protein homolog OS=Mus musculus GN=Ammecr1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.246e-48
Identity = 96/184 (52.17%), Postives = 122/184 (66.30%), Query Frame = 2
Query:  191 EMAVYCFDTLVAH-YNSEDAPPPAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQSTLFALHYSD 739
            EM  +CFD L  H Y  +    P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++Y LTSALKD RFPP+   ELP L C+VS+LT+FE   +YLDWEVG HG+ IEF + E  ++R+ATYLPEVA  +GW  ++ IDSL+RK G+  PIT   RK I+LTRY+S    L Y++
Sbjct:  140 EMCCFCFDVLYCHLYGYQQPRTPRFTNEPYPLFVTWKI---GRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIRIEFIN-EKGSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRSEKMTLSYAE 319          
BLAST of DR404143 vs. ExPASy Swiss-Prot
Match: AMER1_HUMAN (AMME syndrome candidate gene 1 protein OS=Homo sapiens GN=AMMECR1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.246e-48
Identity = 96/184 (52.17%), Postives = 122/184 (66.30%), Query Frame = 2
Query:  191 EMAVYCFDTLVAH-YNSEDAPPPAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQSTLFALHYSD 739
            EM  +CFD L  H Y  +    P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++Y LTSALKD RFPP+   ELP L C+VS+LT+FE   +YLDWEVG HG+ IEF + E  ++R+ATYLPEVA  +GW  ++ IDSL+RK G+  PIT   RK I+LTRY+S    L Y++
Sbjct:  129 EMCCFCFDVLYCHLYGYQQPRTPRFTNEPYPLFVTWKI---GRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIRIEFIN-EKGSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRSEKMTLSYAE 308          
BLAST of DR404143 vs. ExPASy Swiss-Prot
Match: Y5902_DROME (Uncharacterized protein CG5902 OS=Drosophila melanogaster GN=CG5902 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.348e-44
Identity = 90/184 (48.91%), Postives = 119/184 (64.67%), Query Frame = 2
Query:  191 EMAVYCFDTLVAHYNSEDAPP-PAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQSTLFALHYSD 739
            +M ++CF+ L    N+ D P  P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++YALTSA KD RF PI   ELP L  +VSIL +FE A  +LDW++G HG+ IEF   E   +R+ATYLP+VA  +GW +++ IDSL+RK G+   IT   RK I+LTRY+S    +HY +
Sbjct:   48 DMCLFCFEVLDCELNNVDGPSVPVFSNDAYPLFVTWKI---GRDKRLRGCIGTFSAMELHHGLREYALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHLDWQLGVHGIRIEFL-TERGCKRTATYLPQVATEQGWDQLQTIDSLLRKGGYRAAITPETRKSIKLTRYRSQEIQMHYKE 227          
BLAST of DR404143 vs. ExPASy Swiss-Prot
Match: AMERL_CAEEL (Uncharacterized protein R166.3 OS=Caenorhabditis elegans GN=R166.3 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.042e-42
Identity = 91/191 (47.64%), Postives = 116/191 (60.73%), Query Frame = 2
Query:  173 MVSANREMAVYCFDTLVAHYNSEDAPP--PAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQSTLFALHYSD 739
            M SAN +MAVYCFD + A  N E  PP        + PLFVTWKK   G +  LRGCIGT     L  G  +YA TSA  D RF PI   E+PSL+C VS+L +FE  +N+ DW +G HG+ + F D      RSA +LPEVA  +GW  VE ID L+RK+G+ G I ++LR  +R+ R+QS+   L Y D
Sbjct:    1 MTSANIQMAVYCFDVINAQLNREKEPPVPKEIPNVKLPLFVTWKK---GHQHDLRGCIGTFSDLRLGEGLNEYAKTSAFHDSRFKPISREEVPSLQCGVSLLINFEPIHNFRDWTIGRHGVRMNFDDGH--RNRSAVFLPEVAQEQGWNHVETIDHLIRKSGYGGHINDALRSALRIVRFQSSKLVLDYKD 186          
BLAST of DR404143 vs. ExPASy Swiss-Prot
Match: YKQ3_SCHPO (Uncharacterized protein C688.03c OS=Schizosaccharomyces pombe GN=SPAC688.03c PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.796e-26
Identity = 72/188 (38.30%), Postives = 99/188 (52.66%), Query Frame = 2
Query:  185 NREMAVYCFDTLVA---HYNSEDAPPPAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIRLTRYQSTLFALHYSD 739
            ++E   YCF+ + A   H    D           PLFV +     G + +LRGCIGT  AR L+     ++  +A  D RF PI   EL  LEC + +L DFE  ++ LDWEVG HG+ I+FT      R S+TYLP VAA + W + E ++SL+ KAG+ G I      +I  TRY+S      Y +
Sbjct:   14 DKEYCYYCFEVVAATLEHRKVRDKWNAKSWTRSIPLFVKFASG-KGHDKQLRGCIGTFRARPLVTNLTYFSKQAAFCDERFRPISLGELALLECQIDLLVDFEPIDDPLDWEVGIHGVSIKFT--ANGIRYSSTYLPSVAAEQRWDQEETLESLIHKAGYYGSIRS---LQITATRYKSLEIGCTYEE 195          
The following BLAST results are available for this feature:
BLAST of DR404143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
AMERL_ARATH1.542e-9080.42Uncharacterized protein At2g38710 OS=Arabidopsis t... [more]
AMERL_PONAB6.554e-4952.72AMMECR1-like protein OS=Pongo abelii GN=AMMECR1L P... [more]
AMERL_HUMAN6.554e-4952.72AMMECR1-like protein OS=Homo sapiens GN=AMMECR1L P... [more]
AMERL_MOUSE8.560e-4952.72AMMECR1-like protein OS=Mus musculus GN=Ammecr1l P... [more]
AMER1_PONAB7.246e-4852.17AMME syndrome candidate gene 1 protein homolog OS=... [more]
AMER1_MOUSE7.246e-4852.17AMME syndrome candidate gene 1 protein homolog OS=... [more]
AMER1_HUMAN7.246e-4852.17AMME syndrome candidate gene 1 protein OS=Homo sap... [more]
Y5902_DROME6.348e-4448.91Uncharacterized protein CG5902 OS=Drosophila melan... [more]
AMERL_CAEEL2.042e-4247.64Uncharacterized protein R166.3 OS=Caenorhabditis e... [more]
YKQ3_SCHPO7.796e-2638.30Uncharacterized protein C688.03c OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245G12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404143 ID=DR404143; Name=DR404143; organism=Citrus sinensis; type=EST; length=740bp
GGGGACAAAAGCTTCTCTAGTGAAGCAAGCAGACTTTCTTCTTCATATAA
ATAACTACTCAGCATTACTATTTCTAATTAAAAAAAAACGCGTAGAAAAT
TTAGTAAGGGAAAAAAAAACCAGCCATTTCTCAGAGCTTTGAAGAAATTG
AAAGAAAAAAAAATTTTAAAAAATGGTGTCGGCAAATCGGGAAATGGCGG
TGTACTGTTTCGACACTCTGGTGGCTCACTACAACAGCGAGGACGCTCCC
CCTCCCGCCTTTGACGAAGGCCAACACCCATTGTTTGTCACTTGGAAGAA
AGTGGTGAATGGTGGGGAACCTCGTTTGCGTGGATGTATCGGAACTCTGG
AAGCTCGTTGCTTGATTAATGGCTTTAAGGACTATGCCTTGACCAGTGCA
TTGAAGGACCGAAGGTTTCCTCCTATACAAGCTAGAGAGCTGCCATCCTT
GGAATGTACAGTTTCTATTTTGACTGATTTTGAAACTGCTAACAACTATC
TTGACTGGGAGGTTGGAACACATGGTTTAATTATTGAGTTTACTGACCCT
GAATATAGTACAAGGCGAAGTGCCACATACCTTCCTGAAGTGGCTGCCCA
TGAAGGATGGACTAAAGTGGAGGCAATCGACTCACTGATGCGAAAAGCAG
GCTTCAGTGGTCCCATCACCGAGTCACTCCGCAAGCGTATACGACTGACT
CGTTACCAGAGCACACTATTTGCATTGCACTACAGCGACT
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