DR404139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404139 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.347e-68 Identity = 129/190 (67.89%), Postives = 154/190 (81.05%), Query Frame = 1 Query: 193 PVFQNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESII 762 PV NFT+N+A+KRIDLGGKA TNYLKELVSYR+INVMDETF++DD KEKLCFVSLD+ RDL++A R + L++ TYVLPDGVTHTKG+VKDP AA+R+LSLS + + VM++ +RK+AD+ KNE DLTNERFLVPE +FQPADLGMNQAGLAECIVRA+NSCH YL VLY+SII Sbjct: 168 PVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYRSINVMDETFLVDDAKEKLCFVSLDLLRDLRLA--RNGNTLIKSTYVLPDGVTHTKGYVKDPQAAKRFLSLS------------EKESVVVMDKVGERKKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSII 343 HSP 2 Score: 89.7373 bits (221), Expect = 1.833e-17 Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 3 Query: 48 MSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSP 185 MSNIVVLDNGGGLIKAG GGERDP IPNC+Y+PLSSKKFIHPSP Sbjct: 1 MSNIVVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSP 46
BLAST of DR404139 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSJ (Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.821e-65 Identity = 128/214 (59.81%), Postives = 158/214 (73.83%), Query Frame = 1 Query: 121 PSQYPTACTVHSPPKNSSTHLPPPPVFQNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESII 762 PS + C++ S TH P V QNFT+NYAV+R+DLGGKALTNYLKEL+SYR++NVMDET +IDD KEKLCFVSLDV DL++AR DN RC+Y+LPDG+T+ KGFVKD D A RY SL S ++ D DR++ D+K+ +L++NEF LTNERFLVPEM+F P DLGMNQAGLAECIVRA+ +CHP+L VL+E II Sbjct: 145 PSLFRAQCSLVVDCGFSFTHASP--VLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGESVRKDS-SDSDRSKF----EDKKKPELSQNEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERII 351
BLAST of DR404139 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSI (Actin-related protein 6 OS=Oryza sativa subsp. indica GN=ARP6 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.821e-65 Identity = 128/214 (59.81%), Postives = 158/214 (73.83%), Query Frame = 1 Query: 121 PSQYPTACTVHSPPKNSSTHLPPPPVFQNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESII 762 PS + C++ S TH P V QNFT+NYAV+R+DLGGKALTNYLKEL+SYR++NVMDET +IDD KEKLCFVSLDV DL++AR DN RC+Y+LPDG+T+ KGFVKD D A RY SL S ++ D DR++ D+K+ +L++NEF LTNERFLVPEM+F P DLGMNQAGLAECIVRA+ +CHP+L VL+E II Sbjct: 145 PSLFRAQCSLVVDCGFSFTHASP--VLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGESVRKDS-SDSDRSKF----EDKKKPELSQNEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERII 351
BLAST of DR404139 vs. ExPASy Swiss-Prot
Match: ARP6_DICDI (Actin-related protein 6 OS=Dictyostelium discoideum GN=arpF PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30 Identity = 81/216 (37.50%), Postives = 123/216 (56.94%), Query Frame = 1 Query: 169 SSTHLPPPPVFQNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLP--DGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLAKNE----------------FDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESII 762 SSTH+ P FQN +NYA+KR ++GGK LTNYLKE+VS+R ++M ET +++ +KEK CF+S D D++ ++ ++ L+ YVLP + + G++K+ + + + E KD + + EE + K D K + L NERF VPE++F P+D+GMNQAGLAE IV+++N + LH LY +II Sbjct: 200 SSTHIIPH--FQNTRLNYAIKRFNIGGKLLTNYLKEIVSFRYWDMMHETKLMNTIKEKTCFISKDFIFDIKRSQIDKLNSNLKIDYVLPNYNDPNNKTGYIKENLNNNNNNNDKNDKLNVNIEKDKDNNDIKSKEEGEEIKLNDEIKKDSTTTTNTTKEEDMEQVLSLVNERFTVPELLFNPSDIGMNQAGLAESIVQSINCTNSNLHIPLYSNII 413
BLAST of DR404139 vs. ExPASy Swiss-Prot
Match: ARP6_ASPFU (Actin-like protein arp6 OS=Aspergillus fumigatus GN=arp6 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.331e-26 Identity = 77/207 (37.20%), Postives = 115/207 (55.56%), Query Frame = 1 Query: 175 THLPPPPVFQNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDL----QIARKRGKDNL---LRCTYVLPDGVTHTKGFVK--DP--DAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESII 762 +H PV++ + A++R+D+GGK LTNYLKE+VS R N++DET+I+++VKE +CFVS + A DL Q RKRG + + YVLPD T KGF++ DP +A +R LS G+ SE V L NERF VPE++F P+D+GM QAG+ + I+++++ LH +++ Sbjct: 205 SHTTVTPVYKGQPIQRAIRRLDIGGKHLTNYLKEMVSMRQYNMVDETYIMNEVKEAVCFVSNNFAGDLEQTWQGNRKRGLTDAAEGITVDYVLPDPNTGKKGFMRPHDPLSNAKKRKSILSGGNAEALSEDV------------------------LILGNERFTVPEILFTPSDIGMKQAGIPDIILQSLSVLPTGLHPSFLANVL 387
BLAST of DR404139 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 8.269e-26 Identity = 64/180 (35.56%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 223 AVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESII 762 A+ RI++GGK LTN+LKE++SYR ++VMDET +I+ VKE +C+VS D RD+ IA+ +G+DN + YVLPD T KGF K R E++ + + + + L NERF VPE++F P+D+G+ + G+ E IV ++ + + +++I+ Sbjct: 169 AIIRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEDNTVMIDYVLPDFSTIKKGFCK--------------------------PREEMVLSGKYKSGEQILR----LANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIV 318
BLAST of DR404139 vs. ExPASy Swiss-Prot
Match: ARP6_CHICK (Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.080e-25 Identity = 63/180 (35.00%), Postives = 104/180 (57.78%), Query Frame = 1 Query: 223 AVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESII 762 A+ RI++GGK LTN+LKE++SYR ++VMDET +I+ VKE +C+VS D +D++IA+ +G++N + YVLPD T KGF K R E++ + + + + LTNERF VPE++F P+D+G+ + G+ E IV ++ + + +++I+ Sbjct: 169 AIIRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQDFYKDMEIAKLKGEENTVMVDYVLPDFSTIKKGFCK--------------------------PREEMVLSGKYKTGEQILR----LTNERFAVPEILFHPSDIGIQEMGIPEAIVDSIQNLPEEMQPHFFKNIV 318
BLAST of DR404139 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.406e-25 Identity = 63/180 (35.00%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 223 AVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESII 762 A+ RI++GGK LTN+LKE++SYR ++VMDET +I+ VKE +C+VS D RD+ IA+ +G++N + YVLPD T KGF K R E++ + + + + L NERF VPE++F P+D+G+ + G+ E IV ++ + + +++I+ Sbjct: 169 AIIRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEENTVMIDYVLPDFSTIKKGFCK--------------------------PREEMVLSGKYKSGEQILR----LANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIV 318
BLAST of DR404139 vs. ExPASy Swiss-Prot
Match: ARP6_SCHPO (Actin-like protein arp6 OS=Schizosaccharomyces pombe GN=arp6 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.474e-24 Identity = 61/198 (30.81%), Postives = 110/198 (55.56%), Query Frame = 1 Query: 169 SSTHLPPPPVFQNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESII 762 S TH+ P V AVKR+D+GGK LTNYLKE++SYR N+M+ET+I++++KE +C+VS + D++I ++ + L C Y LPD T G++ V+D+++ + + +L+NERF++PE++F P+D+ + +AG+ E ++++V + ++L E+++ Sbjct: 166 SFTHIIP--VIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNMMEETYIVNEIKESVCYVSQNFKEDMEICHEKPRSKLEIC-YALPDYSTGKHGYI-----------------------VRDINQ-------------KIEQQVLNLSNERFMIPELLFSPSDIEIREAGIPEAVMQSVTHFPENIQAMLLENVV 324
BLAST of DR404139 vs. ExPASy Swiss-Prot
Match: ARP6_EMENI (Actin-like protein arp6 OS=Emericella nidulans GN=arp6 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.926e-24 Identity = 72/207 (34.78%), Postives = 111/207 (53.62%), Query Frame = 1 Query: 175 THLPPPPVFQNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIA----RKRGKDNL---LRCTYVLPDGVTHTKGFVKDPD----AAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESII 762 +H PV++ + ++R+DLGGK LTNYLKELVS R N++DET+I+++VKE +CFVS D RDL+ RKRG+ + + YVLPD +GF++ D + +R L+ S Q +E V L NERF VPE++F P+D+GM AG+ + I+++++ LH +++ Sbjct: 216 SHTVITPVYRGRPLQRGIRRLDLGGKHLTNYLKELVSMRQYNMVDETYIMNEVKESVCFVSNDFNRDLERTWKGNRKRGQPDPTDGVVVDYVLPDPNGGKRGFMRPHDPLLGSKKRKAVLAGASAEQLNEDV------------------------LVLGNERFTVPEILFTPSDIGMKSAGIPDIILQSLSVLPTGLHPAFLANVL 398 The following BLAST results are available for this feature:
BLAST of DR404139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404139 ID=DR404139; Name=DR404139; organism=Citrus sinensis; type=EST; length=763bpback to top |