CX069944

Overview
NameCX069944
Unique NameCX069944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069944 vs. ExPASy Swiss-Prot
Match: SAS10_DROME (Something about silencing protein 10 OS=Drosophila melanogaster GN=Sas10 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.152e-17
Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = -2
Query:  184 ETVDGKRHITYQMEKNRGLTRARKKLTKNPRKKYRSKHEKAVVRRKGQVRDIRKPTGPYGGEATGINPGISRSTRFK 414
            E  D +R ITYQM KN+GLT  RKK  +NPR K+R K+ KA++RRKG VR +RK    YGGE +GI  G+++S +F+
Sbjct:  351 EEEDARRGITYQMAKNKGLTPHRKKELRNPRVKHRGKYRKALIRRKGAVRTVRKELQRYGGELSGIKAGVTKSVKFR 427          
BLAST of CX069944 vs. ExPASy Swiss-Prot
Match: SAS10_MOUSE (Something about silencing protein 10 OS=Mus musculus GN=Utp3 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.790e-16
Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = -2
Query:  184 RESEDEFYEQVKRQRAEKLAAKSEIYTRTPATPSLPETVDGKRHITYQMEKNRGLTRARKKLTKNPRKKYRSKHEKAVVRRKGQVRDIRKPTGPYGGEATGINPGISRSTRFK 522
            +E ED   +++KR++ E  A +  +           E  + KR ITYQ+ KNRGLT  RKK+ +NPR K+R K  KA +RR+GQVR++R+    Y GE +GI  G+ +S + K
Sbjct:  370 KEMEDR--QELKRKKEENSAEEQAL-----------EEQNAKRAITYQIAKNRGLTPRRKKIDRNPRVKHREKFRKAKIRRRGQVREVRREEQRYSGELSGIRAGVKKSIKLK 469          
BLAST of CX069944 vs. ExPASy Swiss-Prot
Match: SAS10_RAT (Something about silencing protein 10 OS=Rattus norvegicus GN=Utp3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.988e-16
Identity = 47/112 (41.96%), Postives = 67/112 (59.82%), Query Frame = -2
Query:  184 ESEDEFYEQVKRQRAEKLAAKSEIYTRTPATPSLPETVDGKRHITYQMEKNRGLTRARKKLTKNPRKKYRSKHEKAVVRRKGQVRDIRKPTGPYGGEATGINPGISRSTRFK 519
            E+  EFY++++  R E    K E      A     E  + KR ITYQ+ KNRGLT  RKK+ +NPR K+R K  +A +RR+GQVR++R+    Y GE +GI  G+ +S + K
Sbjct:  364 EAALEFYKEME-DRPELKRKKEE----NSAEEQALEEQNAKRAITYQIAKNRGLTPRRKKIDRNPRVKHREKFRRAKIRRRGQVREVRREEQRYSGELSGIRAGVKKSIKLK 470          
BLAST of CX069944 vs. ExPASy Swiss-Prot
Match: SAS10_HUMAN (Something about silencing protein 10 OS=Homo sapiens GN=UTP3 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.802e-16
Identity = 44/108 (40.74%), Postives = 66/108 (61.11%), Query Frame = -2
Query:  184 EFYEQVKRQRAEKLAAKSEIYTRTPATPSLPETVDGKRHITYQMEKNRGLTRARKKLTKNPRKKYRSKHEKAVVRRKGQVRDIRKPTGPYGGEATGINPGISRSTRFK 507
            ++Y++++ +  +KL  K E            E  + KR ITYQ+ KNRGLT  RKK+ +NPR K+R K  +A +RR+GQVR++RK    Y GE +GI  G+ +S + K
Sbjct:  377 KYYKEIEDR--QKLKRKKE---ENSTEEQALEDQNAKRAITYQIAKNRGLTPRRKKIDRNPRVKHREKFRRAKIRRRGQVREVRKEEQRYSGELSGIRAGVKKSIKLK 479          
BLAST of CX069944 vs. ExPASy Swiss-Prot
Match: SAS10_YEAST (Something about silencing protein 10 OS=Saccharomyces cerevisiae GN=SAS10 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.883e-16
Identity = 67/207 (32.37%), Postives = 101/207 (48.79%), Query Frame = -2
Query:  181 SSKISQLVPAQPNKPKVVSGDDDLPKRDDIGERR-------RKHELRVLAGAGIKSEDDAWDELGTFRTXXXXXXXXXXXXETRESEDEFYEQVKRQRAEKLAAKSE------IYTRTPATPSLPETV--DGKRHITYQMEKNRGLTRARKKLTKNPRKKYRSKHEKAVVRRKGQVRDIRK--PTGPYGGEATGINPGISRSTRFKN 750
            +SKI Q    +  K     GDDD+P ++ + ER+       RK  +    GA +  +D   ++    R+               + E+++Y+QV+R + +K  ++ E      I  R      L E V  DGKR I YQ+ KN+GLT  R K  +N R K R K++KA  + K  VR +     +G Y GE TGI  G++RS +FKN
Sbjct:  420 TSKIDQ---QENKKTDRFKGDDDIPYKERLFERQQRLLDEARKRGMHDNNGADLDDKDYGSEDEAVSRSI------------NTQGENDYYQQVQRGKQDKKISRKEAHKNAVIAAREGKLAELAENVSGDGKRAINYQILKNKGLTPKRNKDNRNSRVKKRKKYQKAQKKLK-SVRAVYSGGQSGVYEGEKTGIKKGLTRSVKFKN 610          
The following BLAST results are available for this feature:
BLAST of CX069944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SAS10_DROME6.152e-1753.25Something about silencing protein 10 OS=Drosophila... [more]
SAS10_MOUSE1.790e-1640.71Something about silencing protein 10 OS=Mus muscul... [more]
SAS10_RAT3.988e-1641.96Something about silencing protein 10 OS=Rattus nor... [more]
SAS10_HUMAN6.802e-1640.74Something about silencing protein 10 OS=Homo sapie... [more]
SAS10_YEAST8.883e-1632.37Something about silencing protein 10 OS=Saccharomy... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_13G11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13G11-M21-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069944 ID=CX069944; Name=CX069944; organism=Citrus sinensis; type=EST; length=829bp
CCCCCCCTCTTTTGAAAAACCGAAATCACCTGTTTATGTTTCAACTGATA
AATACATGTACAGAGCTACAACCAAATTTTGGGTTGCAACGAACACCACC
CCAACGTTACAAGATTCATCGACTCAATACTACCTCTGTGATTTTCAACA
AGGAAAATTGGATCAAAACAACAGCATCTAATTTTTGAATCTTGTGCTTC
TACTGATTCCTGGGTTAATGCCAGTGGCTTCTCCACCATAAGGACCAGTG
GGTTTTCTGATATCCCGAACCTGCCCTTTACGACGCACAACTGCCTTCTC
ATGCTTCGATCGGTATTTCTTTCTTGGATTCTTAGTTAGCTTCTTGCGTG
CACGTGTCAAACCCCTGTTCTTCTCCATCTGATAAGTGATGTGCCGCTTT
CCATCTACAGTTTCAGGCAAAGATGGTGTTGCTGGGGTCCTTGTATAAAT
CTCAGATTTAGCAGCTAGTTTTTCAGCTCGCTGACGTTTTACTTGTTCGT
AAAATTCATCTTCAGACTCCCTGGTTTCCCCATCATCCCCAACCTCCATA
TCGTCATCTTCATCAGTCCTAAATGTGCCAAGTTCATCCCAAGCATCATC
CTCAGACTTAATTCCTGCTCCTGCCAGCACTCTGAGCTCATGTTTCCTCC
GCCTTTCTCCAATGTCGTCCCTCTTAGGAAGATCATCATCACCAGAAACA
ACCTTTGGCTTATTTGGCTGAGCAGGGACAAGTTGGGAAATTTTACTTGA
TCGCAATGAGCTTACATGCCCATTACTCATTCCTAGAGTTCCCCTCTCAA
CACCCGTAGCATCGTCATCAAAATCATCA
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