DR404096

Overview
NameDR404096
Unique NameDR404096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length444
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7736 contig Csv1_Contig7736:949..1391. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.489e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.489e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.489e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.489e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.489e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.489e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  477 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 512
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.489e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  472 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 507
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.489e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.251e-13
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNALSKQRAMLEN+LRACVGLAPENNMILEYK
Sbjct:  475 GTPVVNALSKQRAMLENVLRACVGLAPENNMILEYK 510
[Close]
BLAST of DR404096 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 4.246e-13
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    4 GTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 111
            GTPVVNALSKQRAMLENILRACVGLAPENNMI+EYK
Sbjct:  475 GTPVVNALSKQRAMLENILRACVGLAPENNMIMEYK 510
The following BLAST results are available for this feature:
BLAST of DR404096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
INO1_WHEAT2.489e-13100.00Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO1_TOBAC2.489e-13100.00Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_SPIPO2.489e-13100.00Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO1_SESIN2.489e-13100.00Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_NICPA2.489e-13100.00Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_MESCR2.489e-13100.00Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_CITPA2.489e-13100.00Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_BRANA2.489e-13100.00Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO3_ARATH3.251e-1397.22Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO2_ARATH4.246e-1397.22Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245E08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404096 ID=DR404096; Name=DR404096; organism=Citrus sinensis; type=EST; length=444bp
GGGGGCACACCAGTGGTGAATGCGCTGTCGAAGCAGCGTGCAATGCTTGA
GAACATTCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGAACAACATGATTT
TGGAATACAAGTGAAGAACTTGCAGGGGAGAAAAGTGGAAGAACCGGTTT
TCCCTTTCTCTGTCACCAATCAAAGCTGTGGTGGTCCATTTAATTACTGA
TTGTAATGTCTTGTGTCATGAAATTGTGGTTAATATTAGTGTGTCCTGTA
TGTTTGCTCTTTTATTTTTTTAATGAAGGTGCTGGAGTGTAGCCCATTGC
CTTTGTAGCTCATTTCGGAGCATGAAATCTCTTGTATTGCAAGTAGATAA
TATATGGAAGTTCATAAATAACTGTATTGCGGCAAATTTGAATCTCATCT
AAATCCTTACTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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