DR404072

Overview
NameDR404072
Unique NameDR404072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404072 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.878e-79
Identity = 150/191 (78.53%), Postives = 165/191 (86.39%), Query Frame = 3
Query:  174 TENGHQNGGLEGLCKNDNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA---TSSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 737
            T+NG+QNG LE LC N        D L+WGV AE +KGSHL+EVKRMVA+YRKPVV LGGETLT+AQVA+IA   T    VELSESAR GVKASS+WVM+SM+KGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTE+ HTLPHS TRAAMLVR+NTLLQGYSGIRFEILEAIT+LLN+NI
Sbjct:    5 TKNGYQNGSLESLCVNQR------DPLSWGVAAEAMKGSHLDEVKRMVADYRKPVVKLGGETLTIAQVASIAGHDTGDVKVELSESARPGVKASSDWVMDSMDKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTETCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITRLLNNNI 189          
BLAST of DR404072 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.755e-78
Identity = 149/189 (78.84%), Postives = 162/189 (85.71%), Query Frame = 3
Query:  189 QNGGLEGLC----KNDNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS--TNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 737
            +N G E  C    KN+N   +S D LNWGV AE +KGSHL+EVKRMV EYRKPVV LGGETLT++QVAAIA       VELSESAR GVKASS+WVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTESSHTLPH+ TRAAMLVR+NTLLQGYSGIRFEILEAITKL+N+N+
Sbjct:   10 KNNGYESFCVTNAKNNNMKVNSADPLNWGVAAEAMKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIAAHDHGVKVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNV 198          
BLAST of DR404072 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.802e-76
Identity = 149/189 (78.84%), Postives = 158/189 (83.60%), Query Frame = 3
Query:  180 NGHQNGGL-EGLCKNDNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA--TSSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 737
            NGHQNG       K +N      D LNWG  AE +KGSHL+EVKRMVAEYRKPVV LGGETLT+AQVAA+A       VELSESAREGVKASS WVM SMN GTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTESSHTLPH+ TRAAMLVR+NTLLQGYSGIRFEILEAITKLLN+N+
Sbjct:    5 NGHQNGSFCLSTAKGNN------DPLNWGAAAEAMKGSHLDEVKRMVAEYRKPVVRLGGETLTIAQVAAVAGHDHGVAVELSESAREGVKASSEWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNV 187          
BLAST of DR404072 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 8.152e-76
Identity = 143/173 (82.66%), Postives = 155/173 (89.60%), Query Frame = 3
Query:  222 DNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT-SSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 737
            +N   ++ D LNWGV AE +KGSHL+EVKRMV EYRKPVV LGGETLT++QVAAIA      VELSESAR GVKASS+WVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTES+HTLPH+ TRAAMLVR+NTLLQGYSGIRFEILEAITKLLN+NI
Sbjct:   27 NNMKVNAADPLNWGVAAEAMKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIAAHDGATVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNI 199          
BLAST of DR404072 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.065e-75
Identity = 145/192 (75.52%), Postives = 163/192 (84.90%), Query Frame = 3
Query:  177 ENGHQNGGLEGLCKNDNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA-----TSSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 737
            +NGH NG    LCK    + +  D LNW + AE+L+GSHL+EVK+MV E+RKP+V LGGETLTVAQVA+IA     ++   VELSESAR GVKASS+WVM+SM KGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAG+FGNGTESSHTLPHS TRAAMLVR+NTLLQGYSGIRFEILEAITKL+N NI
Sbjct:    7 QNGHVNGEAMDLCKK---SINVNDPLNWEMAAESLRGSHLDEVKKMVDEFRKPIVKLGGETLTVAQVASIANVDNKSNGVKVELSESARAGVKASSDWVMDSMGKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGTESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNI 195          
BLAST of DR404072 vs. ExPASy Swiss-Prot
Match: PALY_HELAN (Phenylalanine ammonia-lyase OS=Helianthus annuus GN=PAL PE=2 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 3.098e-75
Identity = 148/192 (77.08%), Postives = 158/192 (82.29%), Query Frame = 3
Query:  177 ENG-HQNGGLEGLCKNDNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS----TNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 737
            ENG H NG   G C  D         LNWGV AE L GSHL+EVK+MV E+RKPVV LGGETLTV+QVA I+ +       VELSE+AR GVKASS+WVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHS TRAAMLVR+NTLLQGYSGIRFEILEAITK LN+NI
Sbjct:    2 ENGTHVNGSANGFCIKD--------PLNWGVAAEALTGSHLDEVKKMVGEFRKPVVKLGGETLTVSQVAGISAAGDGNMVKVELSEAARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNNNI 185          
BLAST of DR404072 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.098e-75
Identity = 147/196 (75.00%), Postives = 162/196 (82.65%), Query Frame = 3
Query:  168 ATTENGHQNGGLEGLC----KNDNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS--TNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 737
            A T+N   N G +  C    KN+N   S  D LNWGV AE +KGSHL+EVKRMV EYRKPVV LGGETLT++QVAAIA       VELSESAR GVKASS+WVMESMNKGTDSYGVTT  GATSHRRTK GGALQKELIRFLNAGIFGNG+ES+HTLPH+ TRAAMLVR+NTLLQGYSGIRFEILEAITKL+N+N+
Sbjct:    7 AITKN---NSGYDSFCLTNAKNNNIKVSDSDPLNWGVAAEAMKGSHLDEVKRMVDEYRKPVVRLGGETLTISQVAAIAAHDHGVKVELSESARAGVKASSDWVMESMNKGTDSYGVTTVHGATSHRRTKQGGALQKELIRFLNAGIFGNGSESTHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNV 199          
BLAST of DR404072 vs. ExPASy Swiss-Prot
Match: PAL1_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.901e-75
Identity = 146/192 (76.04%), Postives = 162/192 (84.38%), Query Frame = 3
Query:  180 NGHQNGGLE-GLCKNDNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT-----SSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 737
            NGH NGG    LCK       S D LNW + AE+L+GSHL+EVK+MV+E+RKP+V LGGE+LTVAQVAAIA      +   VELSE AR GVKASS+WVM+SMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAG+FGNGTE+SHTLPHS TRAAMLVR+NTLLQGYSGIRFEILEAITKL+N NI
Sbjct:    4 NGHVNGGENFELCKK------SADPLNWEMAAESLRGSHLDEVKKMVSEFRKPMVKLGGESLTVAQVAAIAVRDKSANGVKVELSEEARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGTETSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNI 189          
BLAST of DR404072 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.537e-74
Identity = 148/196 (75.51%), Postives = 158/196 (80.61%), Query Frame = 3
Query:  156 MERGATTENGHQNGGLEGLCKNDNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 737
            M+      NG  +GG  G C  D         LNWGV AE +KGSHLEEVK MV E+RKPVV LGGETLT++QVAAIA   S   VELSESAREGVKASS+WVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTES HTLP S TRAAMLVR+NTLLQGYSGIRFEILEAI+K LN+NI
Sbjct:    1 MDSTTAIGNGVGSGGSPGFCLKD--------PLNWGVAAEAMKGSHLEEVKGMVEEFRKPVVRLGGETLTISQVAAIAVRGSEVAVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPQSATRAAMLVRINTLLQGYSGIRFEILEAISKFLNNNI 188          
BLAST of DR404072 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.630e-74
Identity = 145/198 (73.23%), Postives = 161/198 (81.31%), Query Frame = 3
Query:  156 MERGATTENGHQNGGLE--GLCKNDNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 737
            M   +  +NGH+NG +E   LC          D LNWGV AETLKGSHL+EVKRMVAEYRKPVV LGGE+LT++QVAAIAT  S   VELSESAR GVKASS+WVM+SM+KGTDSYGVTTGFGATSHRRTK G ALQKELIRFLNAG+FG+  ES HTLPH  TRAAMLVR+NTLLQGYSGIRFEILE ITK LN+N+
Sbjct:    1 MATNSIKQNGHKNGSVELPELCIKK-------DPLNWGVAAETLKGSHLDEVKRMVAEYRKPVVKLGGESLTISQVAAIATHDSGVKVELSESARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGVFGSTKESGHTLPHQATRAAMLVRINTLLQGYSGIRFEILEVITKFLNNNV 191          
The following BLAST results are available for this feature:
BLAST of DR404072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PALY_POPTR7.878e-7978.53Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]
PAL1_PEA1.755e-7878.84Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL1_SOYBN2.802e-7678.84Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PALY_TRISU8.152e-7682.66Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PAL5_SOLLC1.065e-7575.52Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PALY_HELAN3.098e-7577.08Phenylalanine ammonia-lyase OS=Helianthus annuus G... [more]
PAL2_PEA3.098e-7575.00Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PAL1_TOBAC6.901e-7576.04Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PALY_CAMSI1.537e-7475.51Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PAL1_PRUAV7.630e-7473.23Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245D05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404072 ID=DR404072; Name=DR404072; organism=Citrus sinensis; type=EST; length=739bp
CGGCCGGGGGAGGGAAATCCATTATAGTTATAGACTNNNGAATNNNNTTT
AGCTCATTCATTCTTCATCACTCCCATTCATTCATTCTTCTTCTTCTTCT
TCTTTCTACAGTTTTGGTATTTTTTGTAATTGCAGTAACATTTACGTAAA
ACGATATGGAGAGAGGTGCCACTACTGAGAATGGTCACCAGAACGGTGGC
CTGGAGGGTTTGTGCAAGAATGACAATTACAATTACAGTTCTGGGGATGC
GTTGAACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCATTTGGAGG
AAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCAACCTCGGT
GGTGAGACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGTCCTCTAC
GAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGGCCAGCAGTA
ATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGGCGTTACC
ACTGGCTTTGGCGCCACTTCTCATCGGAGAACCAAGAACGGCGGTGCTCT
TCAGAAGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGAAACGGAA
CAGAGTCATCTCACACGCTACCTCACTCAACAACAAGGGCAGCCATGCTT
GTGAGGGTTAACACTCTTCTCCAGGGCTACTCTGGCATCCGATTTGAAAT
CCTGGAAGCGATCACAAAGCTGCTCAATCACAACATCAC
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