CX069847

Overview
NameCX069847
Unique NameCX069847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3314 contig Csv1_Contig3314:14..547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX069847 vs. ExPASy Swiss-Prot
Match: NO93_SOYBN (Early nodulin-93 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.476e-31
Identity = 77/107 (71.96%), Postives = 77/107 (71.96%), Query Frame = -1 
Query:  148 MAKNVAQSPLERTSLASLDHKLAMAKRCSHEXXXXXXXXXXXXXXXXXIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA 468
            MAK    SPLER SLASLD KLA AKRCSHE                 IPTLASVRMLPWARANLNHTAQALIIST   AAYFIVADKTVLATARKNSF Q SN EA
Sbjct:    1 MAKG--NSPLERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIISTATAAAYFIVADKTVLATARKNSFNQPSNSEA 105
The following BLAST results are available for this feature:
BLAST of CX069847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NO93_SOYBN1.476e-3171.96Early nodulin-93 OS=Glycine max PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_13C02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13C02-E3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069847 ID=CX069847; Name=CX069847; organism=Citrus sinensis; type=EST; length=534bp
GCCCCCCCTTTTTCTTGGAATGGAAACCCATCTTTTATTTATACGTAGAT
AACGGATATACATCCTAAGTTGGTTATTGGAATATGATGATAACGCAGTA
CAACATAAGCGAATCATATAATCATTTAATTAGCAATTCAAAACCTATGC
TTCCATGTTAGAGGCTTGCTGGAAGGAGTTTTTTCGTGCTGTGGCCAGAA
CAGTCTTGTCAGCCACAATGAAATATGCCGCTCCAGCCACTGTTGAGATA
ATAAGAGCTTGAGCAGTGTGATTGAGGTTGGCTCTAGCCCAAGGAAGCAT
CCTCACACTCGCGAGCGTTGGAATGGCAGTAGCAACCGTAGCAACAACAG
CTGCCTTAGCTCCCGCAATTACACCCTCATGAGAGCAACGCTTAGCCATA
GCCAGTTTATGGTCAAGTGAAGCCAAGCTGGTCCTTTCAAGAGGAGACTG
AGCTACATTCTTTGCCATTGTTTGAGAAAGTTAAAATGGAGAATATGTTA
ATAATGAGCTGAGGAAATTGACGAGGCTGTGCCT
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