CX069792

Overview
NameCX069792
Unique NameCX069792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10255 contig Csv1_Contig10255:407..1234. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX069792 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.466e-58
Identity = 108/170 (63.53%), Postives = 139/170 (81.76%), Query Frame = -1 
Query:  303 LDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQA 812
            ++LD  FEQK ++AK+V EELEK M  YGY I   L+VDI PD+ V+RAMNEINAA RM+LA+  K EAEKILQ+KRAE EAE+KYL G+G+ARQRQAI DGLR+++L FS  V GTS+K+VMD++++TQYFDT+K++G SSK  +VFIPHGPG V+DI  QIR GL+++
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMES 170
The following BLAST results are available for this feature:
BLAST of CX069792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO5.466e-5863.53Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_12G09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12G09-N18-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069792 ID=CX069792; Name=CX069792; organism=Citrus sinensis; type=EST; length=827bp
TTTTTTTTTTTTTTTTTCACCAATCATACAGCACACTTCAAGTTTCACAT
TTGCATGCACGATCAAAGTATATTACATTATCTACCACTCTTTATCTACC
ATTATTTACCATTCTTTATTTACCTGATGACAGAAACTTCTTTCCCATAA
TATGCTAGATGGTACTACAGGCAATTACGAAACTTCTTCACAACTTCAAG
CTACATAAAAACATATCCAAACTGGAAGATTAGCCCCCGCTCCATGTGGG
ATGAAACAGAGTTTGACTTTGAGGTGGCACAAACTCACTACGTGGTAGCA
TTGGCCTGAAGGAGACCTTCCCTGATCTGCGACGCAATGTCTTTGACAGC
ACCAGGTCCATGGGGGATGAACACAGAGTTAGTCTTTGAGGAGGCACCAA
TTTCCTTCATGGTATCAAAATACTGGGTGACCAGAACCATGTCCATGACA
TCCTTTGAAGATGTTCCAGGTACATTCTCAGAGAAGGCTAGCACGCTATC
CCTCAGGCCATCAACAATGGCCTGACGCTGACGTGCAATACCAAGGCCTG
CCAAATACTTTGATTCTGCTTCTCCTTCAGCACGCTTGATCTGCAATATT
TTCTCTGCTTCCGCTTTCTCATTTGCAGCCAGCCTCATTCTGGCCGCTGC
ATTGATCTCATTCATTGCTCTCTTCACATGTTCATCTGGTTCAATATCTA
CGATGAGAGTCTGAACTATCTCATAACCATAATGAGACATGGCCTTTTCG
AGTTCCTCTTCCACAGCTTTGGCTATGTCGTTCTTCTGCTCAAAGGTTGC
ATCCAGGTCCAGCTTTGGTACACTTGC
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