CX069760

Overview
NameCX069760
Unique NameCX069760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6305 contig Csv1_Contig6305:608..1405. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069760 vs. ExPASy Swiss-Prot
Match: PDK_SCHPO ([Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC644.11c PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.916e-45
Identity = 97/186 (52.15%), Postives = 132/186 (70.97%), Query Frame = -3
Query:  257 IDTKMSPVQVARNASEHARCVCLREYG--SAPDFNIYGDPSFTFPYVPSHLHLMVFELVKNSLRA-VEERYMDSDKVAPPIRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPL-DENTDLAADMGT--MAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGDSQEPL 796
            I T+ +  Q+   A+E+A+ +C   YG   AP+  I  DPS    YV SHL+  VFE++KNSLRA VE   +DSD   PPI++IVA G ED+TIK+SDEGGGI R  +P +++Y+++TA   L D+  D+ +   T  MAG+G+GLP++RLY RYFGGDL++ISMEGYGTD Y+HL+RL +S EPL
Sbjct:  240 ISTRANIYQIIEGAAENAKYICRLAYGLFEAPEIQIICDPSLEMMYVESHLNHAVFEILKNSLRATVEFHGVDSD-FFPPIKVIVAKGQEDITIKISDEGGGISRRNIPLVWSYMFTTASPTLTDDPHDIVSANSTTPMAGFGFGLPLARLYTRYFGGDLELISMEGYGTDVYIHLNRLCESAEPL 424          
BLAST of CX069760 vs. ExPASy Swiss-Prot
Match: PDK_DROME ([Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Drosophila melanogaster GN=Pdk PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.644e-38
Identity = 87/195 (44.62%), Postives = 123/195 (63.08%), Query Frame = -3
Query:  212 VARNASEHARCVCLREYGSAPDFNIY---GDPSFTFP----YVPSHLHLMVFELVKNSLRAVEERY-MDSDKVAPPIRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDENTDLAADMGTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGD-SQEPLP*ISTASKEIYGSPV 769
            V R+A E+AR +C + Y ++P   I     +P    P    YVPSHL+ M+FEL KNS+RAV E +  D++   PP+++ +  G ED+ +K+SD+GGGIPRS   ++F Y+YSTA  P   +         +AGYGYGLPISRLYARYF GD+ ++S EG+GTDA ++L  L D + E LP  +  S + Y + V
Sbjct:  201 VVRDAYENARFLCDQYYLTSPALEIQQHSSEPGDNLPIRTVYVPSHLYYMLFELFKNSMRAVVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFKYMYSTAPQPSKSDLHTVP----LAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEANELLPIFNKTSSKFYRATV 391          
BLAST of CX069760 vs. ExPASy Swiss-Prot
Match: PDK_ASCSU ([Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Ascaris suum PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.895e-36
Identity = 87/195 (44.62%), Postives = 123/195 (63.08%), Query Frame = -3
Query:  233 IDTKMSPVQVARNASEHARCVCLREYGSAPDFNIYGDPS------FTFPYVPSHLHLMVFELVKNSLRAVEERYMDSDKVAPPIRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDENTDLAADMGTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLG-DSQEPLP*ISTASK 796
            ID       V  +A E+AR +C R Y +AP   +    S       +   VPSHL+ ++FEL KNS+RA  E +  +D+  PPI+++V  G ED++IK+SD GGG+ R+ L ++FTY+YSTA  P  + T        +AGYGYGLP+SRLYARYF GD+ ++SMEGYGTDA + L  +  ++ E LP  ST+S+
Sbjct:  187 IDPGCDVESVVHDAYENARFLCERYYLTAPGMKLEMHNSVNPGMPISIVAVPSHLYHIMFELFKNSMRATVENH-GADEDLPPIKVMVVRGAEDLSIKISDRGGGVSRTILDRLFTYMYSTAPPPPRDGTQ-----PPLAGYGYGLPLSRLYARYFHGDMYLVSMEGYGTDAMIFLKAIPVEASEVLPIYSTSSR 375          
BLAST of CX069760 vs. ExPASy Swiss-Prot
Match: PDK4_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Homo sapiens GN=PDK4 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.221e-36
Identity = 92/224 (41.07%), Postives = 128/224 (57.14%), Query Frame = -3
Query:  143 IDTKMSPVQVARNASEHARCVCLREYGSAPDFNI------YGDPSFTFPYVPSHLHLMVFELVKNSLRAVEERYMDSDKVAPPIRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDENTDLAADMGTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGDSQEPLP*ISTASKEIYGSPVMNFNATSKFSSYQNSRNSIDGII 796
            ID     V V ++A E +R +C + Y S+P+  +      + D      YVPSHLH M+FEL KN++RA  E + ++     PI +IV  G ED+TIK+SD GGG+P   + ++F+Y YSTA  P+ +N+  A     +AG+GYGLPISRLYA+YF GDL + S+ GYGTDA ++L  L            +S+ I   PV N    S F  YQ S  + D  I
Sbjct:  194 IDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVE-HQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPVMDNSRNAP----LAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKAL------------SSESIEKLPVFN---KSAFKHYQMSSEADDWCI 397          
BLAST of CX069760 vs. ExPASy Swiss-Prot
Match: PDK2_MOUSE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Mus musculus GN=Pdk2 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.513e-36
Identity = 87/189 (46.03%), Postives = 120/189 (63.49%), Query Frame = -3
Query:  254 IDTKMSPVQVARNASEHARCVCLREYGSAPDFNIY------GDPSFTFPYVPSHLHLMVFELVKNSLRAVEERYMDSDKVAPPIRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDENTDLAADMGT-MAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLG-DSQEPLP 796
            ID   S   V ++A + A+ +C + Y ++PD  I        +      YVPSHL+ M+FEL KN++RA  E + +S    PPI+I+VA G ED++IK+SD GGG+P   + ++F+Y+YSTA  P           GT +AG+GYGLPISRLYA+YF GDLQ+ SMEG+GTDA ++L  L  DS E LP
Sbjct:  191 IDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNANQPIHMVYVPSHLYHMLFELFKNAMRATVESH-ESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRRIERLFSYMYSTAPTPQPGTG------GTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLP 372          
BLAST of CX069760 vs. ExPASy Swiss-Prot
Match: PDK2_RAT ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Rattus norvegicus GN=Pdk2 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.200e-36
Identity = 89/189 (47.09%), Postives = 122/189 (64.55%), Query Frame = -3
Query:  254 IDTKMSPVQVARNASEHARCVCLREYGSAPDFNIY--GDPSFTFP----YVPSHLHLMVFELVKNSLRAVEERYMDSDKVAPPIRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDENTDLAADMGT-MAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLG-DSQEPLP 796
            ID   S   V ++A + A+ +C + Y ++PD  I      + T P    YVPSHL+ M+FEL KN++RA  E + +S    PPI+I+VA G ED++IK+SD GGG+P   + ++F+Y+YSTA  P           GT +AG+GYGLPISRLYA+YF GDLQ+ SMEG+GTDA ++L  L  DS E LP
Sbjct:  191 IDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESH-ESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTG------GTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLP 372          
BLAST of CX069760 vs. ExPASy Swiss-Prot
Match: PDK2_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Homo sapiens GN=PDK2 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 7.200e-36
Identity = 85/189 (44.97%), Postives = 121/189 (64.02%), Query Frame = -3
Query:  254 IDTKMSPVQVARNASEHARCVCLREYGSAPDFNIY------GDPSFTFPYVPSHLHLMVFELVKNSLRAVEERYMDSDKVAPPIRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDENTDLAADMGT-MAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLG-DSQEPLP 796
            ID   +  +V ++A + A+ +C + Y ++PD  I               YVPSHL+ M+FEL KN++RA  E + +S  + PPI+++VA G ED++IK+SD GGG+P   + ++F+Y+YSTA  P           GT +AG+GYGLPISRLYA+YF GDLQ+ SMEG+GTDA ++L  L  DS E LP
Sbjct:  191 IDPNCNVSEVVKDAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNAMRATVESH-ESSLILPPIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTG------GTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLP 372          
BLAST of CX069760 vs. ExPASy Swiss-Prot
Match: PDK4_SPETR ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Spermophilus tridecemlineatus GN=PDK4 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.736e-35
Identity = 92/225 (40.89%), Postives = 129/225 (57.33%), Query Frame = -3
Query:  143 IDTKMSPVQVARNASEHARCVCLREYGSAPDFNIY-------GDPSFTFPYVPSHLHLMVFELVKNSLRAVEERYMDSDKVAPPIRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDENTDLAADMGTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGDSQEPLP*ISTASKEIYGSPVMNFNATSKFSSYQNSRNSIDGII 796
            ID K   V V ++A E ++ +C + Y ++P+  +        G P     YVPSHLH M+FEL KN++RA  ER  +S     P+ +IV  G ED+TIK+SD GGG+P     ++F+Y+YSTA  P+ +N+  A     +AG+GYGLPISRLYA+YF GDL + S+ GYGTDA ++L  L            +S+ +   PV N    S F  YQ S  + D  I
Sbjct:  194 IDPKCDVVAVIQDAFESSKMLCDQYYLTSPELKLTQVNGKFPGQP-IHIVYVPSHLHHMLFELFKNAMRATVER-QESWPSLTPVEVIVVLGKEDLTIKISDRGGGVPLRITDRLFSYMYSTAPTPVMDNSRNAP----LAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKAL------------SSESVEKLPVFN---KSAFKHYQMSSEADDWCI 397          
BLAST of CX069760 vs. ExPASy Swiss-Prot
Match: PDK1_MOUSE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial OS=Mus musculus GN=Pdk1 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.667e-35
Identity = 86/198 (43.43%), Postives = 124/198 (62.63%), Query Frame = -3
Query:  224 IDTKMSPVQVARNASEHARCVCLREYGSAPDFNIYG----DPSFTFP--YVPSHLHLMVFELVKNSLRAVEERYMDSDKVAPPIRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDENTDLAADMGTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLG-DSQEPLP*ISTASKEIY 796
            I+     V+V ++  E+AR +C   Y ++P+  +       P  T    YVPSHL+ MVFEL KN++RA  E + D   V PPI++ V  G ED+T+K+SD GGG+P S + ++F Y+YSTA  P  E +        +AG+GYGLPISRLYA+YF GDL++ S+EGYGTDA +++  L  +S E LP  + A+ + Y
Sbjct:  217 INPNCDVVEVIKDGYENARRLCDLYYVNSPELELEELNAKSPGQTIQVVYVPSHLYHMVFELFKNAMRATMEHHADKG-VYPPIQVHVTLGEEDLTVKMSDRGGGVPLSKIDRLFNYMYSTAPRPRVETSRAVP----LAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTESVERLPVYNKAAWKHY 409          
BLAST of CX069760 vs. ExPASy Swiss-Prot
Match: PDK3_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3, mitochondrial OS=Homo sapiens GN=PDK3 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.095e-35
Identity = 85/188 (45.21%), Postives = 114/188 (60.64%), Query Frame = -3
Query:  254 IDTKMSPVQVARNASEHARCVCLREYGSAPDFNIYG------DPSFTFPYVPSHLHLMVFELVKNSLRAVEERYMDSDKVAPPIRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDENTDLAADMGTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRL-GDSQEPLP 796
            ID   +   V ++A E A+ +C + Y  AP+  +        D      YVPSHL  M+FEL KNS+RA  E Y D  +  P ++ +V  G ED++IK+SD GGG+P   + ++F Y+YSTA  P  E T  A     +AG+GYGLPISRLYARYF GDL++ SMEG GTDA ++L  L  +S E LP
Sbjct:  187 IDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAA----PLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLP 370          
The following BLAST results are available for this feature:
BLAST of CX069760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PDK_SCHPO2.916e-4552.15[Pyruvate dehydrogenase [lipoamide]] kinase, mitoc... [more]
PDK_DROME2.644e-3844.62[Pyruvate dehydrogenase [lipoamide]] kinase, mitoc... [more]
PDK_ASCSU1.895e-3644.62[Pyruvate dehydrogenase [lipoamide]] kinase, mitoc... [more]
PDK4_HUMAN4.221e-3641.07[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK2_MOUSE5.513e-3646.03[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK2_RAT7.200e-3647.09[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK2_HUMAN7.200e-3644.97[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK4_SPETR2.736e-3540.89[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK1_MOUSE4.667e-3543.43[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK3_HUMAN6.095e-3545.21[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F04-L8-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069760 ID=CX069760; Name=CX069760; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTTTGCAAAGAACTAAAATGTTTAATAATTACCAGCTGATATGA
AGAAAGAGGAGGAATATACAAGAAAGCTGCCAATTTATTAGGACCAAAAT
TGACAGCAATTCATATCTTGTACAAATTGTATAGCTTTGTTTAATAATTC
CATCAATTGAGTTACGAGAATTTTGATAACTGCTAAACTTTGATGTTGCA
TTGAAGTTCATGACAGGGCTCCCGTAAATCTCCTTAGAAGCAGTTGAAAT
TCAGGGTAAGGGTTCTTGAGAATCCCCCAAGCGCGACAAATGGAGATATG
CATCAGTTCCATATCCTTCCATGGAGATAATTTGCAAATCTCCTCCAAAA
TACCGAGCATACAAACGGCTTATTGGAAGCCCATATCCATACCCAGCCAT
TGTTCCCATGTCAGCTGCTAGATCAGTGTTTTCATCCAGAGGGTTTCTGG
CAGTGCTGTAAAGATATGTGAAAATTTTGGGAAGACCACTTCTTGGTATG
CCACCTCCCTCATCCGAAACCTTAATAGTAACATCCTCTAATCCATCGGC
AACTATTATTCGAATAGGAGGTGCAACTTTATCTGAGTCCATATAACGCT
CTTCAACAGCACGTAATGAGTTCTTAACCAACTCAAATACCATGAGATGC
AAGTGTGAAGGGACGTAAGGGAATGTAAAACTGGGATCACCGTAGATATT
AAAATCGGGTGCACTGCCATACTCCCGCAGACAAACACAACGTGCATGCT
CACTAGCATTCCTAGCAACCTGCACTGGAGACATTTTTGTGTCTATGT
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