CX069757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069757 vs. ExPASy Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.888e-20 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = -2 Query: 1 SNAILVKKANGKWRMYIDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLFSFMDAFLGYN*IPMFEKDEESTAFITN*GLFCYRVMTFGLKNAGATYQRLVNKIFKSLIRRTMEVYVDDMITKSKNPSE 384 S +LV K +G +R+ +D+ LNKA D FPLP+ID L+ +F+ +D GY+ IPM KD TAF+T G + Y VM FGL NA +T+ R + F+ L R + VY+DD++ S++P E Sbjct: 660 SPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEE 785
BLAST of CX069757 vs. ExPASy Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 2.888e-20 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = -2 Query: 1 SNAILVKKANGKWRMYIDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLFSFMDAFLGYN*IPMFEKDEESTAFITN*GLFCYRVMTFGLKNAGATYQRLVNKIFKSLIRRTMEVYVDDMITKSKNPSE 384 S +LV K +G +R+ +D+ LNKA D FPLP+ID L+ +F+ +D GY+ IPM KD TAF+T G + Y VM FGL NA +T+ R + F+ L R + VY+DD++ S++P E Sbjct: 634 SPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEE 759
BLAST of CX069757 vs. ExPASy Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.654e-15 Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = -2 Query: 1 GFIQEVNYPEWISNAILVKKANG----KWRMYIDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLFSFMDAFLGYN*IPMFEKDEESTAFITN*GLFCYRVMTFGLKNAGATYQRLVNKIFKSLIRRTMEVYVDDMITKSKNPSE 420 G I+E N P ++ KK + K+R+ ID+ LN+ D +P+P +D+++ F+ +D G++ I M E+ TAF T G + Y M FGL+NA AT+QR +N I + L+ + VY+DD+I S + +E Sbjct: 233 GLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTE 376
BLAST of CX069757 vs. ExPASy Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.891e-14 Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = -2 Query: 1 NYPEWISNAILVKKANGKWRMYIDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLFSFMDAFLGYN*IPMFEKDEESTAFITN*GLFCYRVMTFGLKNAGATYQRLVNKIFKSLIRRTMEVYVDDMITKSKNPSE 402 N P W+ K+R+ ID+ LN+ D P+P +D+++ + F+ +D G++ I M + TAF T G + Y M FGLKNA AT+QR +N I + L+ + VY+DD+I S + E Sbjct: 244 NSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDE 377
BLAST of CX069757 vs. ExPASy Swiss-Prot
Match: POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.535e-13 Identity = 44/131 (33.59%), Postives = 69/131 (52.67%), Query Frame = -2 Query: 10 NYPEWISNAILVKKANGKWRMYIDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLFSFMDAFLGYN*IPMFEKDEESTAFITN*GLFCYRVMTFGLKNAGATYQRLVNKIFKSLIRRTMEVYVDDMITKSKN 402 N P WI ++RM +DF LN D++P+P I+ + S F+ +D G++ I M E D TAF T G + + + FGLKNA A +QR+++ I + I + VY+DD+I S++ Sbjct: 160 NSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSED 290
BLAST of CX069757 vs. ExPASy Swiss-Prot
Match: POLY_DROME (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13 Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = -2 Query: 1 NYPEWISNAILVKKA-----NGKWRMYIDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLFSFMDAFLGYN*IPMFEKDEESTAFITN*GLFCYRVMTFGLKNAGATYQRLVNKIFKSLIRRTMEVYVDDMITKSKNPSE 402 N P W+ + KK N R+ IDF LN+ D +P+P I ++ + F+ +D GY+ I + E D E T+F N G + + + FGL+NA + +QR ++ + + I + VYVDD+I S+N S+ Sbjct: 218 NSPTWVVD----KKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESD 352
BLAST of CX069757 vs. ExPASy Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13 Identity = 43/136 (31.62%), Postives = 72/136 (52.94%), Query Frame = -2 Query: 25 IQEVNYPEWISNAILVKKANG------KWRMYIDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLFSFMDAFLGYN*IPMFEKDEESTAFITN*GLFCYRVMTFGLKNAGATYQRLVNKIFKSLIRRTMEVYVDDMI 414 I E + ++ S +LV K + KWR+ ID+ +NK D FPLP+ID ++D FS +D G++ I + E + T+F T+ G + + + FGLK A ++QR++ F + +Y+DD+I Sbjct: 342 IVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLI 477
BLAST of CX069757 vs. ExPASy Swiss-Prot
Match: RRPO_OENBE (RNA-directed DNA polymerase homolog OS=Oenothera bertiana PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.950e-13 Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = -2 Query: 25 RMYIDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLFSFMDAFLGYN*IPMFEKDEESTAFITN*GLFCYRVMTFGLKNAGATYQRLVNKIFKSLIRRTMEVYVDDMI 345 RM ID+ L K K+ +P+P++D L D A + F+ +D GY + + + DE T +T G F +RVM FGL NA AT+ L+N + + + VY+DD++ Sbjct: 7 RMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTTCVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLV 113
BLAST of CX069757 vs. ExPASy Swiss-Prot
Match: RTF21_SCHPO (Retrotransposable element Tf2 155 kDa protein type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.300e-12 Identity = 42/125 (33.60%), Postives = 66/125 (52.80%), Query Frame = -2 Query: 1 ILVKKANGKWRMYIDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLFSFMDAFLGYN*IPMFEKDEESTAFITN*GLFCYRVMTFGLKNAGATYQRLVNKIFKSLIRRTMEVYVDDMITKSKNPSE 375 + V K G RM +D+ LNK + +PLP I+QL+ G ++F+ +D Y+ I + + DE AF G+F Y VM +G+ A A +Q +N I + Y+DD++ SK+ SE Sbjct: 453 MFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESE 577
BLAST of CX069757 vs. ExPASy Swiss-Prot
Match: RTF23_SCHPO (Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.449e-12 Identity = 41/125 (32.80%), Postives = 67/125 (53.60%), Query Frame = -2 Query: 1 ILVKKANGKWRMYIDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLFSFMDAFLGYN*IPMFEKDEESTAFITN*GLFCYRVMTFGLKNAGATYQRLVNKIFKSLIRRTMEVYVDDMITKSKNPSE 375 + V K G RM +D+ LNK + +PLP I+QL+ G ++F+ +D Y+ I + + DE AF G+F Y VM +G+ A A +Q +N I + + Y+D+++ SK+ SE Sbjct: 453 MFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESE 577 The following BLAST results are available for this feature:
BLAST of CX069757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069757 ID=CX069757; Name=CX069757; organism=Citrus sinensis; type=EST; length=874bpback to top |