CX069714

Overview
NameCX069714
Unique NameCX069714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069714 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.084e-19
Identity = 46/73 (63.01%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   41 PSSNPNPNSKDMEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPT 259
            P++    ++   EIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDT                GAKAKTNFPT
Sbjct:   10 PATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPT 82          
BLAST of CX069714 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.596e-18
Identity = 42/64 (65.62%), Postives = 45/64 (70.31%), Query Frame = 2
Query:   77 EIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPNE 268
            E+ +RGVRKRPWGRYAAEIRDPGKKTRVWLGTFDT                G+KAKTNFP P E
Sbjct:   30 EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPLPGE 93          
BLAST of CX069714 vs. ExPASy Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.596e-18
Identity = 42/64 (65.62%), Postives = 45/64 (70.31%), Query Frame = 2
Query:   77 EIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPNE 268
            E+ YRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDT                G KAKTNFP+P E
Sbjct:   24 EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPSPTE 87          
BLAST of CX069714 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.921e-18
Identity = 42/64 (65.62%), Postives = 45/64 (70.31%), Query Frame = 2
Query:   77 EIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPNE 268
            E+ YRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDT                G KAKTNFP P+E
Sbjct:   24 EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPLPSE 87          
BLAST of CX069714 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.924e-17
Identity = 42/73 (57.53%), Postives = 47/73 (64.38%), Query Frame = 2
Query:   44 SSNPNPNSKDMEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTP 262
            +  PN +    EIR+RGVRKRPWGR+AAEIRDP KKTRVWLGTFD+                G KAKTNFP P
Sbjct:   14 TGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPLP 86          
BLAST of CX069714 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.398e-17
Identity = 41/62 (66.13%), Postives = 43/62 (69.35%), Query Frame = 2
Query:   77 EIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTP 262
            E+ YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT                G KAKTNFP+P
Sbjct:    9 EVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSP 70          
BLAST of CX069714 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.168e-16
Identity = 41/62 (66.13%), Postives = 43/62 (69.35%), Query Frame = 2
Query:   80 IRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPN 265
            +RYRGVRKRPWGRYAAEIRDP KK+RVWLGTFDT                GAKAKTNFP  N
Sbjct:   18 VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPCYN 79          
BLAST of CX069714 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.285e-16
Identity = 41/59 (69.49%), Postives = 41/59 (69.49%), Query Frame = 2
Query:   77 EIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNF 253
            EIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT                G KAKTNF
Sbjct:   28 EIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86          
BLAST of CX069714 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.861e-15
Identity = 39/65 (60.00%), Postives = 42/65 (64.62%), Query Frame = 2
Query:   62 NSKDMEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 256
            N    EIR+RGVRKRPWGR+AAEIRDP KK RVWLGTFD+                G KAKTNFP
Sbjct:   20 NGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFP 84          
BLAST of CX069714 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.987e-14
Identity = 37/63 (58.73%), Postives = 42/63 (66.67%), Query Frame = 2
Query:   68 KDMEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 256
            K  E+RYRGVR+RPWGRYAAEIRDP KK RVWLG+F+T                G+KA TNFP
Sbjct:   47 KSKEVRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFP 109          
The following BLAST results are available for this feature:
BLAST of CX069714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
ERF78_ARATH3.084e-1963.01Ethylene-responsive transcription factor 4 OS=Arab... [more]
ERF80_ARATH7.596e-1865.63Ethylene-responsive transcription factor 9 OS=Arab... [more]
ERF4_TOBAC7.596e-1865.63Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF4_NICSY9.921e-1865.63Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF3_TOBAC4.924e-1757.53Ethylene-responsive transcription factor 3 OS=Nico... [more]
ERF81_ARATH8.398e-1766.13Ethylene-responsive transcription factor 12 OS=Ara... [more]
ERF76_ARATH4.168e-1666.13Ethylene-responsive transcription factor 11 OS=Ara... [more]
ERF79_ARATH9.285e-1669.49Ethylene-responsive transcription factor 8 OS=Arab... [more]
ERF82_ARATH7.861e-1560.00Ethylene-responsive transcription factor 3 OS=Arab... [more]
ERF77_ARATH2.987e-1458.73Ethylene-responsive transcription factor 10 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12D03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12D03-H6-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069714 ID=CX069714; Name=CX069714; organism=Citrus sinensis; type=EST; length=857bp
CCCCCCCTTCAAAATGGCTCCGAGAGATAAGCTCTACAAACCATCCTCTA
ACCCGAATCCGAATTCGAAGGATATGGAGATCCGATACAGAGGAGTGAGG
AAGCGGCCGTGGGGGCGTTACGCCGCCGAGATCCGGGACCCGGGGAAGAA
AACCCGCGTCTGGCTCGGCACCTTCGACACCGCCGAGGAAGCAGCACGTG
CCTACGACGCAGCAGCGCGTGAGTTCCGCGGCGCCAAAGCCAAGACAAAC
TTCCCAACGCCAAACGAAATCCTTGGCACCCTCGCCCGCAGCCCCAGCCA
GAGCAGCACCGTGGAGTCATCCTCTCCTCCTCCGCCGACGCTGCTGCCAC
AGCCACAGCCGCTGCCACAGCTAAACCTAGCTCTCAACAGCTACCGTAAT
GCCGGCGCGTGCCTCCCAGTCGCCACGGCGCGTCCGGTCCTTTTCTTCGA
CGTTTTCTCCTCCGGTGGTACTGTTGCGACTCACCGTGATGCACGCTGTG
TTGGTTTTTATCCCGGCGGGACCCAGAGCGACTCCGATTCGTCATCGGTC
GTCGTTGATTACGATCCTCGTTCGTCTGAGAGAAGATTGATTGATCTTGA
TCTTGATCTTAATCTCCCTCCTCCACCTGAAGTGGCTTGAGTTTTTGGAC
TGAAGCTAATGCTGACGTGTACGGCGATGGTGATGTGTATATAGTGACCC
TAGCAAGATCCTTTGGTCGATCTTCGTATTTTTGTTTTTGCCACTGGAAA
ATCTAGGACGGTTACTCCACGTTGTTTTTTACTGCTGCCGTTAGAAATAT
ATATATATATGTGTTTAATGCTTAGTCAAATGATATAAGAGAAGTGAGAA
CCCTTTT
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