DR403983

Overview
NameDR403983
Unique NameDR403983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9028 contig Csv1_Contig9028:7..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403983 vs. ExPASy Swiss-Prot
Match: DYL2_RAT (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.164e-31
Identity = 60/88 (68.18%), Postives = 73/88 (82.95%), Query Frame = 1
Query:  217 SGKRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 480
            S ++ VIK+ADM ED+Q++AVD A  A EK ++EKD+A  IKK+FDKK+ PTWHCIVG NFGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89          
BLAST of DR403983 vs. ExPASy Swiss-Prot
Match: DYL2_MOUSE (Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.164e-31
Identity = 60/88 (68.18%), Postives = 73/88 (82.95%), Query Frame = 1
Query:  217 SGKRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 480
            S ++ VIK+ADM ED+Q++AVD A  A EK ++EKD+A  IKK+FDKK+ PTWHCIVG NFGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89          
BLAST of DR403983 vs. ExPASy Swiss-Prot
Match: DYL2_HUMAN (Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.164e-31
Identity = 60/88 (68.18%), Postives = 73/88 (82.95%), Query Frame = 1
Query:  217 SGKRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 480
            S ++ VIK+ADM ED+Q++AVD A  A EK ++EKD+A  IKK+FDKK+ PTWHCIVG NFGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89          
BLAST of DR403983 vs. ExPASy Swiss-Prot
Match: DYL2_BOVIN (Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.164e-31
Identity = 60/88 (68.18%), Postives = 73/88 (82.95%), Query Frame = 1
Query:  217 SGKRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 480
            S ++ VIK+ADM ED+Q++AVD A  A EK ++EKD+A  IKK+FDKK+ PTWHCIVG NFGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89          
BLAST of DR403983 vs. ExPASy Swiss-Prot
Match: DYL1_ANTCR (Dynein light chain LC6, flagellar outer arm OS=Anthocidaris crassispina PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.222e-30
Identity = 61/88 (69.32%), Postives = 73/88 (82.95%), Query Frame = 1
Query:  217 SGKRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 480
            S ++ VIK+ADM ED+Q++AVD A  A EK ++EKD+A  IKK+FDKK+ PTWHCIVG NFGSYVTHET HF+YFYL Q AVLLFKSG
Sbjct:    2 SERKAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89          
BLAST of DR403983 vs. ExPASy Swiss-Prot
Match: DYL1_DROME (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster GN=ctp PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.085e-30
Identity = 59/88 (67.05%), Postives = 73/88 (82.95%), Query Frame = 1
Query:  217 SGKRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 480
            S ++ VIK+ADM E++Q++AVD A  A EK ++EKD+A  IKK+FDKK+ PTWHCIVG NFGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct:    2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89          
BLAST of DR403983 vs. ExPASy Swiss-Prot
Match: DYL2_DROME (Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster GN=Cdlc2 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.722e-30
Identity = 59/88 (67.05%), Postives = 73/88 (82.95%), Query Frame = 1
Query:  217 SGKRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 480
            S ++ VIK+ADM E++Q++AVD A  A EK ++EKD+A  IKK+FDKK+ PTWHCIVG NFGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct:    2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89          
BLAST of DR403983 vs. ExPASy Swiss-Prot
Match: DYL1_CHLRE (Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.556e-30
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 1
Query:  208 VSQSGKRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 480
            ++    + VIK+ADM E++Q +AVD A  A EK ++EKD+A  IKK+FD+KH PTWHCIVG NFGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct:    1 MASGSSKAVIKNADMSEEMQADAVDCATQALEKYNIEKDIAAYIKKEFDRKHNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 91          
BLAST of DR403983 vs. ExPASy Swiss-Prot
Match: DYL1_CAEEL (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.644e-30
Identity = 57/86 (66.28%), Postives = 72/86 (83.72%), Query Frame = 1
Query:  223 KRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 480
            ++ VIK+ADM +D+Q++A+D A  A EK ++EKD+A  IKK+FDKK+ PTWHCIVG NFGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct:    4 RKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89          
BLAST of DR403983 vs. ExPASy Swiss-Prot
Match: DYL1_RAT (Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29
Identity = 56/86 (65.12%), Postives = 72/86 (83.72%), Query Frame = 1
Query:  223 KRVVIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGSYVTHETNHFVYFYLDQKAVLLFKSG 480
            ++ VIK+ADM E++Q+++V+ A  A EK ++EKD+A  IKK+FDKK+ PTWHCIVG NFGSYVTHET HF+YFYL Q A+LLFKSG
Sbjct:    4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89          
The following BLAST results are available for this feature:
BLAST of DR403983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DYL2_RAT7.164e-3168.18Dynein light chain 2, cytoplasmic OS=Rattus norveg... [more]
DYL2_MOUSE7.164e-3168.18Dynein light chain 2, cytoplasmic OS=Mus musculus ... [more]
DYL2_HUMAN7.164e-3168.18Dynein light chain 2, cytoplasmic OS=Homo sapiens ... [more]
DYL2_BOVIN7.164e-3168.18Dynein light chain 2, cytoplasmic OS=Bos taurus GN... [more]
DYL1_ANTCR1.222e-3069.32Dynein light chain LC6, flagellar outer arm OS=Ant... [more]
DYL1_DROME2.085e-3067.05Dynein light chain 1, cytoplasmic OS=Drosophila me... [more]
DYL2_DROME2.722e-3067.05Dynein light chain 2, cytoplasmic OS=Drosophila me... [more]
DYL1_CHLRE3.556e-3063.74Dynein 8 kDa light chain, flagellar outer arm OS=C... [more]
DYL1_CAEEL4.644e-3066.28Dynein light chain 1, cytoplasmic OS=Caenorhabditi... [more]
DYL1_RAT1.765e-2965.12Dynein light chain 1, cytoplasmic OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403983 ID=DR403983; Name=DR403983; organism=Citrus sinensis; type=EST; length=692bp
GGGGAGACTCATAGAGTCATAGAGAGAGACGTCCCTCCTGTTGCGTATTG
CTCNNNTCTTTATTAGCAAAAGCATAAAACAAATAAAAACTGAAAAAAAT
TTCATTGAGACAAAACAACAAACACCATGAGTGAAGAAACGAAGAAGAGC
GTCACCGGAGCTCTGGTCGTGAAACCCAACTCCGACGACCGGAAACCGAC
TGTGGCAGTGTCCCAATCTGGAAAACGAGTCGTTATTAAGAGCGCCGACA
TGAAAGAGGACCTGCAAAAGGAGGCTGTTGATATTGCTATTGCAGCATTT
GAGAAGAACAGTGTAGAGAAAGATGTAGCTGAGAGGATAAAGAAGGATTT
TGATAAGAAGCATGGACCTACTTGGCACTGTATTGTCGGTAGCAATTTTG
GTTCATATGTGACTCACGAAACAAACCACTTTGTTTATTTCTATTTGGAT
CAGAAAGCAGTTTTGCTATTCAAATCCGGTTAGCCCAATGTCGAGAAAGA
TGGTGGATTGTGGTTCGGATGATGAGTTTACGTTCCAAATGCTATAAATA
TTGTCTGTATGTAGTAATTGAAATCTTTACATGGAGATTCTTGAGCCTAA
GTTGTATATTTGAATTCGCTTGGAACTGGTTTGATACTTCAAAATGGATG
TGCACTGCAGTTTTTAGTTAATAGTTTTCCTTGTGTATCACA
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