EY663123

Overview
NameEY663123
Unique NameEY663123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length445
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663123 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.831e-22
Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 1
Query:    4 RVRVASFVECYMNQYGATEEEAYSEFRKQVSNAWKDINEECLRPTVVPVPLLIRILNLTRAADVIYKYKDGYTDSEELKDFIVSLLINPVPI 279
            R  VAS ++CYMNQ+G +++EA    +K  ++ WK+INEEC+R + V V  L+RI+NL R  DV YKY DGYTDS++LK F+  L ++P+ I
Sbjct:  510 RGHVASCIDCYMNQHGVSKDEAVKILQKMATDCWKEINEECMRQSQVSVGHLMRIVNLARLTDVSYKYGDGYTDSQQLKQFVKGLFVDPISI 601          
BLAST of EY663123 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 6.535e-22
Identity = 47/92 (51.09%), Postives = 66/92 (71.74%), Query Frame = 1
Query:    4 RVRVASFVECYMNQYGATEEEAYSEFRKQVSNAWKDINEECLRPTVVPVPLLIRILNLTRAADVIYKYKDGYTDSEELKDFIVSLLINPVPI 279
            R  VA+ ++CYM Q+G ++E A       VS+AWKD+N+E +RP V P PLL+R+LNL+R  DV Y+Y+D YT+ + LK+ IVSLLI  +PI
Sbjct:  456 REHVATGIDCYMQQFGVSKERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPKLLKEHIVSLLIETIPI 547          
BLAST of EY663123 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.483e-21
Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = 1
Query:   19 SFVECYMNQYGATEEEAYSEFRKQVSNAWKDINEECLRPTVVPVPLLIRILNLTRAADVIYKYKDGYTD-SEELKDFIVSLLINPVPI 279
            S +ECYM QYG T +EAY+EF K + ++WKD+NEE L+PT +P P+L R LNL R  DV+Y+  DGYT   +  K  I SLLI+P+ I
Sbjct:  468 SAIECYMKQYGVTAQEAYNEFNKHIESSWKDVNEEFLKPTEMPTPVLCRSLNLARVMDVLYREGDGYTHVGKAAKGGITSLLIDPIQI 555          
BLAST of EY663123 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.968e-18
Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 1
Query:   19 SFVECYMNQYGATEEEAYSEFRKQVSNAWKDINEECLRPTVVPVPLLIRILNLTRAADVIYKYKDGYT-DSEELKDFIVSLLINPVPI 279
            S +ECYM +YG T +EAY  F K V +AWKD+N+E L+PT +P  +L R LNL R  DV+Y+  DGYT   +  K  I SLLI PV +
Sbjct:  467 SAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNKEFLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPVAL 554          
BLAST of EY663123 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.570e-18
Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 1
Query:   19 SFVECYMNQYGATEEEAYSEFRKQVSNAWKDINEECLRPTVVPVPLLIRILNLTRAADVIYKYKDGYT-DSEELKDFIVSLLINPVPI 279
            S +ECYM +YG T +EAY  F K V +AWKD+N+E L+PT +P  +L R LNL R  DV+Y+  DGYT   +  K  I SLLI P+ +
Sbjct:  467 SAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPIAL 554          
BLAST of EY663123 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.275e-17
Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   19 SFVECYMNQYGATEEEAYSEFRKQVSNAWKDINEECLRPTVVPVPLLIRILNLTRAADVIYKYKDGYT-DSEELKDFIVSLLINPVPI 279
            S +ECYM +YG T +EAY  F K V +AWKD+N+  L+PT +P  +L R LNL R  DV+Y+  DGYT   +  K  I SLLI P+ +
Sbjct:  467 SAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNQGFLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPIAL 554          
BLAST of EY663123 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.841e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   19 SFVECYMNQYGATEEEAYSEFRKQVSNAWKDINEECLRPTVVPVPLLIRILNLTRAADVIYKYKDGYT-DSEELKDFIVSLLINPVPI 279
            S +ECYM +YG + +EAY  F K V +AWKD+N+E  +PT +P  +L R LNL R  DV+Y+  DGYT   +  K  I SLLI P+ +
Sbjct:  467 SAIECYMEEYGVSAQEAYDVFNKHVESAWKDVNQEFQKPTEMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPIAL 554          
BLAST of EY663123 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 5.016e-14
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 1
Query:    4 RVRVASFVECYMNQYGATEEEAYSEFRKQVSNAWKDINEECLRPTVVPVPLLIRILNLTRAADVIYKYK-DGYTDSEE-LKDFIVSLLINPVPI 279
            R ++A+ +EC M  YG + +EA ++F+     AWKDINE  LRPT V    L  ILNL R  +V Y +  DGYT  E+ LK  I++LL++ + I
Sbjct:  455 RGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSIKI 548          
BLAST of EY663123 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.235e-12
Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 1
Query:    4 RVRVASFVECYMNQYGATEEEAYSEFRKQVSNAWKDINEE-CLRPTVVPVPLLIRILNLTRAADVIYKYKDGYTD-SEELKDFIVSLLINPV 273
            R  VAS +ECYM Q+ A+E++AY    K+V +AWK+IN E  +    V + + +R+LN +R+ DV+YK KD +T    E+ + I SL ++ +
Sbjct:  454 RKHVASTIECYMKQFDASEQQAYESLNKKVEDAWKEINREFMITCKDVNIHVAMRVLNFSRSVDVLYKNKDHFTHVGVEVINHIKSLFVDAI 545          
The following BLAST results are available for this feature:
BLAST of EY663123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
CASS_RICCO3.831e-2250.00Casbene synthase, chloroplastic OS=Ricinus communi... [more]
HUMS_ARATH6.535e-2251.09Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
DCS3_GOSAR2.483e-2153.41(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
DCS2_GOSAR1.968e-1851.14(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS1_GOSAR2.570e-1850.00(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS1_GOSHI1.275e-1748.86(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
DCS4_GOSAR2.841e-1747.73(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
5EAS_TOBAC5.016e-1443.62Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
ECS1_ARTAN1.235e-1240.22Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-051-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663123 ID=EY663123; Name=EY663123; organism=Citrus sinensis; type=EST; length=445bp
CCACGCGTCCGCGTTGCCTCATTCGTTGAGTGTTACATGAACCAATATGG
AGCAACAGAAGAGGAAGCATACAGTGAGTTCCGGAAACAAGTTTCAAATG
CATGGAAGGATATAAATGAGGAATGCCTGCGCCCAACTGTTGTGCCAGTG
CCACTTCTTATACGAATTCTCAATCTTACACGAGCTGCAGATGTCATTTA
CAAGTATAAAGATGGCTATACTGACTCCGAAGAGCTGAAAGATTTTATTG
TTTCTCTGCTTATTAATCCTGTGCCGATATGAGCATGATATTAAGCTTAT
GTTTCAACACCCTGCTGGAAAATAATTAGTCCATTGCTGTTTCAGCTTGG
ATGCTTTTTAAAAATAAATTGAAGGGTGGTGATCCCCGTTGTAATCAGAC
TGCACTCAAATAGACAAGTTATAATAAAGTTTTTATTGCTCTATT
back to top