CX069616

Overview
NameCX069616
Unique NameCX069616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3530 contig Csv1_Contig3530:1002..1863. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069616 vs. ExPASy Swiss-Prot
Match: ILV5_PEA (Ketol-acid reductoisomerase, chloroplastic OS=Pisum sativum GN=PGAAIR PE=2 SV=1)

HSP 1 Score: 530.02 bits (1364), Expect = 6.435e-150
Identity = 262/286 (91.61%), Postives = 277/286 (96.85%), Query Frame = 3
Query:    3 TFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLHPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNDAPINGDLISNFLSDPVHGAIEVCAQLRPTVDISVPPDADFV 860
            TFATTLEQEYKSDIFGERGILLGAVHGIVESLFRR+TENGMSEDLAYKNTVE ITG+ISK ISTQGMLAVYN+ S + KKEFEKAYSAS+YPCMEILYECYEDVA+GSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPL+PFTAGV+VA+MMAQIE+LRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVD+ APIN DLISNF+SDPVHGAI+VCA+LRPT+DISVP  ADFV
Sbjct:  287 TFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRYTENGMSEDLAYKNTVESITGVISKTISTQGMLAVYNALSEDGKKEFEKAYSASFYPCMEILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLYPFTAGVFVAMMMAQIEVLRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDSGAPINQDLISNFVSDPVHGAIQVCAELRPTLDISVPAAADFV 572          
BLAST of CX069616 vs. ExPASy Swiss-Prot
Match: ILV5_ARATH (Ketol-acid reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=At3g58610 PE=2 SV=2)

HSP 1 Score: 527.709 bits (1358), Expect = 3.194e-149
Identity = 263/286 (91.96%), Postives = 272/286 (95.10%), Query Frame = 3
Query:    3 TFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLHPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNDAPINGDLISNFLSDPVHGAIEVCAQLRPTVDISVPPDADFV 860
            TFATTLEQEY+SDIFGERGILLGAVHGIVESLFRR+TENGMSEDLAYKNTVECITG IS+ ISTQGMLAVYNS S E KK+FE AYSAS+YPCMEILYECYEDV +GSEIRSVVLAGRRFYEKEGLPAFPMG IDQTRMWKVGERVR +RPAGDLGPL+PFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVD+ A IN DLISNF SDPVHGAIEVCAQLRPTVDISVP DADFV
Sbjct:  297 TFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRYTENGMSEDLAYKNTVECITGTISRTISTQGMLAVYNSLSEEGKKDFETAYSASFYPCMEILYECYEDVQSGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGERVRKSRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDSGAAINRDLISNFFSDPVHGAIEVCAQLRPTVDISVPADADFV 582          
BLAST of CX069616 vs. ExPASy Swiss-Prot
Match: ILV5_SPIOL (Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea GN=AHRI PE=1 SV=1)

HSP 1 Score: 517.694 bits (1332), Expect = 3.305e-146
Identity = 258/286 (90.21%), Postives = 272/286 (95.10%), Query Frame = 3
Query:    3 TFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLHPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNDAPINGDLISNFLSDPVHGAIEVCAQLRPTVDISVPPDADFV 860
            TFATTLEQEYKSDIFGERGILLGAVHGIVE LFRR+TE+GMSEDLAYKNTVECITG+ISK IST+GMLA+YNS S E KK+F+ AYSASYYP M+ILYECYEDVA+GSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGE+VRS RPAGDLGPL+PFTAGVYVALMMAQIEILRKKGHSYSEIINESVIE+VDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYIL+QQALVAVDN APIN DLISNFLSDPVH AI VCAQLRP+VDISV  DADFV
Sbjct:  303 TFATTLEQEYKSDIFGERGILLGAVHGIVECLFRRYTESGMSEDLAYKNTVECITGVISKTISTKGMLALYNSLSEEGKKDFQAAYSASYYPSMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGEKVRSVRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIEAVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILSQQALVAVDNGAPINQDLISNFLSDPVHEAIGVCAQLRPSVDISVTADADFV 588          
BLAST of CX069616 vs. ExPASy Swiss-Prot
Match: ILV5_ORYSJ (Ketol-acid reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0573700 PE=1 SV=1)

HSP 1 Score: 513.842 bits (1322), Expect = 4.772e-145
Identity = 253/286 (88.46%), Postives = 268/286 (93.71%), Query Frame = 3
Query:    3 TFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLHPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNDAPINGDLISNFLSDPVHGAIEVCAQLRPTVDISVPPDADFV 860
            TFATTLEQEYKSDIFGERGILLGAVHGIVE+LFRR+TE GM E++AYKNTVE ITGIISK IS +GML VYNS + E KKEF KAYSAS+YPCM+ILYECYEDVA+GSEIRSVVLAGRRFYEKEGLPAFPMG IDQTRMWKVGE+VRSTRP  DLGPLHPFTAGVYVALMMAQIE+LRKKGHSYSEIINESVIESVDSLNPFMHARGV+FMVDNCSTTARLGSRKWAPRFDYILTQQA V VD DAPIN DLISNF+SDPVHGAIEVCA+LRPTVDISVP +ADFV
Sbjct:  285 TFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGEKVRSTRPENDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSLNPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVTVDKDAPINQDLISNFMSDPVHGAIEVCAELRPTVDISVPANADFV 570          
BLAST of CX069616 vs. ExPASy Swiss-Prot
Match: ILV5_NEUCR (Ketol-acid reductoisomerase, mitochondrial OS=Neurospora crassa GN=ilv-2 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 3
Query:  507 LMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDN---DAPINGD 755
            + +AQ E+LR++GHS SE  NE+V E+  SL P + A G+ +M D CSTTAR G+  W P+F     + AL  V N   D+  NGD
Sbjct:  276 MFLAQYEVLRERGHSPSEAFNETVEEATQSLYPLIGAHGMDWMFDACSTTARRGAIDWTPKF-----KDALKPVFNNLYDSVKNGD 356          
BLAST of CX069616 vs. ExPASy Swiss-Prot
Match: ILV5_YEAST (Ketol-acid reductoisomerase, mitochondrial OS=Saccharomyces cerevisiae GN=ILV5 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = 3
Query:    6 FATTLEQEYKSDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRP 455
            + TT E+E  SD++GERG L+G +HG+  + +    ENG S   A+  TVE  T  +  +I   GM  +Y++ S   ++     Y         +  + YE    G+E +  +    +   +E L    +  I    +WKVG+ VR  RP
Sbjct:  244 YQTTFEREVNSDLYGERGCLMGGIHGMFLAQYDVLRENGHSPSEAFNETVEEATQSLYPLIGKYGMDYMYDACSTTARRGALDWYPIFKNALKPVFQDLYESTKNGTETKRSLEFNSQPDYREKLEK-ELDTIRNMEIWKVGKEVRKLRP 392          
The following BLAST results are available for this feature:
BLAST of CX069616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ILV5_PEA6.435e-15091.61Ketol-acid reductoisomerase, chloroplastic OS=Pisu... [more]
ILV5_ARATH3.194e-14991.96Ketol-acid reductoisomerase, chloroplastic OS=Arab... [more]
ILV5_SPIOL3.305e-14690.21Ketol-acid reductoisomerase, chloroplastic OS=Spin... [more]
ILV5_ORYSJ4.772e-14588.46Ketol-acid reductoisomerase, chloroplastic OS=Oryz... [more]
ILV5_NEUCR3.109e-1145.35Ketol-acid reductoisomerase, mitochondrial OS=Neur... [more]
ILV5_YEAST4.061e-1129.33Ketol-acid reductoisomerase, mitochondrial OS=Sacc... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_11F12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11F12-L23-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069616 ID=CX069616; Name=CX069616; organism=Citrus sinensis; type=EST; length=862bp
TCACATTTGCCACCACATTAGAGCAGGAGTACAAGAGTGACATCTTTGGG
GAGCGTGGCATTCTACTTGGTGCTGTTCATGGAATTGTGGAATCCTTGTT
TAGAAGGTTCACTGAAAATGGAATGAGTGAGGATCTGGCTTACAAGAATA
CCGTGGAGTGCATAACAGGAATTATATCAAAGATCATCTCAACTCAGGGT
ATGTTGGCTGTCTACAATTCCTTCTCTGGAGAAGACAAAAAGGAATTCGA
GAAAGCTTATAGTGCCTCATATTATCCGTGCATGGAAATCTTATATGAGT
GCTATGAAGATGTGGCCGCTGGCAGTGAGATCCGCAGTGTTGTCTTGGCT
GGACGTCGGTTTTATGAAAAGGAAGGTCTACCAGCTTTCCCTATGGGAAA
AATTGATCAGACTCGCATGTGGAAAGTTGGTGAGCGAGTCCGATCAACAC
GTCCAGCAGGTGACTTAGGCCCATTACACCCATTCACAGCAGGTGTCTAT
GTGGCTCTGATGATGGCCCAGATTGAGATCCTGAGGAAGAAAGGGCACTC
CTATTCTGAGATCATCAATGAAAGTGTGATTGAGTCGGTGGATTCATTGA
ATCCATTCATGCATGCTCGTGGAGTTTCATTTATGGTCGACAACTGCTCT
ACAACAGCCCGTTTGGGATCAAGGAAATGGGCCCCTCGTTTTGATTACAT
CCTGACACAACAAGCCTTGGTGGCAGTGGACAATGATGCCCCCATCAATG
GGGATCTCATCAGCAACTTCCTTTCTGATCCAGTCCATGGAGCCATTGAA
GTCTGTGCTCAGTTGAGACCAACTGTTGACATTTCAGTGCCACCAGATGC
AGATTTTGTGCG
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