CX069593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: PSD11_MOUSE (26S proteasome non-ATPase regulatory subunit 11 OS=Mus musculus GN=Psmd11 PE=1 SV=3) HSP 1 Score: 263.462 bits (672), Expect = 1.090e-69 Identity = 133/232 (57.33%), Postives = 171/232 (73.71%), Query Frame = 1 Query: 1 LTAARTAANAIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 693 LT+ART ANAIY PP Q T+D+QSGI+HA EEKD+KTAYSY ++++ P+A+ SLKYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILDKKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+ Sbjct: 190 LTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYSKAKKL 421
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: PSD11_HUMAN (26S proteasome non-ATPase regulatory subunit 11 OS=Homo sapiens GN=PSMD11 PE=1 SV=3) HSP 1 Score: 263.077 bits (671), Expect = 1.424e-69 Identity = 133/232 (57.33%), Postives = 171/232 (73.71%), Query Frame = 1 Query: 1 LTAARTAANAIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 693 LT+ART ANAIY PP Q T+D+QSGI+HA EEKD+KTAYSY ++++ P+A+ SLKYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILDKKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+ Sbjct: 190 LTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: PSD11_BOVIN (26S proteasome non-ATPase regulatory subunit 11 OS=Bos taurus GN=PSMD11 PE=2 SV=3) HSP 1 Score: 263.077 bits (671), Expect = 1.424e-69 Identity = 133/232 (57.33%), Postives = 171/232 (73.71%), Query Frame = 1 Query: 1 LTAARTAANAIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 693 LT+ART ANAIY PP Q T+D+QSGI+HA EEKD+KTAYSY ++++ P+A+ SLKYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILDKKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+ Sbjct: 190 LTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: PSD11_DICDI (26S proteasome non-ATPase regulatory subunit 11 OS=Dictyostelium discoideum GN=psmD11 PE=2 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 7.067e-69 Identity = 127/232 (54.74%), Postives = 173/232 (74.57%), Query Frame = 1 Query: 1 LTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPE-LDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 693 LT+ART AN IY PP Q ID+QSGILH+EEKDYKTA+SY ++LEDP A+ +LKYMLLCKIM +Q DDV +++ K GL+Y ++A+ ++ +H+KRSL +F+ ++F QL +DPI+H HL+ LY LLEQNLCR+IEP+SRVEI+HIA+LI+LP+D VE+KLS MILDKK+ G LDQG G LI+FE+ K D ++ +LETI + +VVD L+ ++ K+ Sbjct: 181 LTSARTNANTIYCPPKLQAEIDMQSGILHSEEKDYKTAFSYFFESYETYDSLEDPFAMKALKYMLLCKIMTNQTDDVHALVNGKIGLKYHNNRSIEAITQISKSHAKRSLHMFQEVTKEFSDQLSDDPIIHSHLTELYSNLLEQNLCRIIEPFSRVEISHIAKLIDLPVDVVERKLSLMILDKKYNGILDQGTGTLIVFEEQKEDKLFNCSLETIGALSRVVDLLYEKTNKL 412
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: RPN6_SCHPO (Probable 26S proteasome regulatory subunit rpn6 OS=Schizosaccharomyces pombe GN=rpn6 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.474e-66 Identity = 127/233 (54.51%), Postives = 167/233 (71.67%), Query Frame = 1 Query: 1 LTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPR-AVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKIM 696 LTAA+T+ANA+Y PP QG +DLQSGILHA++ D+KTAYSY +L+D + A+ SLKYMLL +IM++ +V +++ K ++Y G +++AM+A+A AH RSL FE AL+D+K +L DPI+ HLSSLYD LLEQNL R++EP+SRVE++HIAELI L VE KLSQMILDK F G LDQG GCLI++++P+ D Y A LE I NMG VVD L A + Sbjct: 188 LTAAKTSANAVYCPPMLQGNLDLQSGILHADDMDFKTAYSYFYEAYEGFTSLDDDKKALSSLKYMLLSQIMLNSVSEVKSLLTGKHAIRYAGRDIEAMRAIAQAHENRSLADFEKALQDYKPELASDPIIRSHLSSLYDNLLEQNLLRVVEPFSRVEVSHIAELIGLSTVQVEGKLSQMILDKIFYGILDQGSGCLIVYDEPQQDKTYEAALEVIKNMGTVVDLLIENKASAL 420
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: RPN6_YEAST (26S proteasome regulatory subunit RPN6 OS=Saccharomyces cerevisiae GN=RPN6 PE=1 SV=3) HSP 1 Score: 209.534 bits (532), Expect = 1.868e-53 Identity = 115/234 (49.15%), Postives = 153/234 (65.38%), Query Frame = 1 Query: 1 LTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALED----PRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQ-YVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSA 687 LTAARTAAN+IY P +DL SGILH E+KDYKTA+SY + L +A LKYMLL KIM++ DDV I+++K + Y +DAMKAVA+A++ RSL F TAL+ ++ +L D + H ++LYDTLLE NLC++IEP+ VEI+HI+++I L VE KLSQMILDK F G LDQG G L ++E P DA Y + LE + + KVVD LF +++ Sbjct: 198 LTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSYEKACQVLKYMLLSKIMLNLIDDVKNILNAKYTKETYQSRGIDAMKAVAEAYNNRSLLDFNTALKQYEKELMGDELTRSHFNALYDTLLESNLCKIIEPFECVEISHISKIIGLDTQQVEGKLSQMILDKIFYGVLDQGNGWLYVYETPNQDATYDSALELVGQLNKVVDQLFEKAS 431
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: YMJ5_CAEEL (Uncharacterized protein F59B2.5 OS=Caenorhabditis elegans GN=F59B2.5 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.536e-39 Identity = 90/233 (38.63%), Postives = 151/233 (64.81%), Query Frame = 1 Query: 1 LTAARTAANAIYVPPAQQGTIDLQSGILH-AEEKDYKTAYSYXXXXXXXXNALEDP-RAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYV-GPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAI--YPATLETISNMGKVVDSLFVRS 684 L A+T N+ + P Q ++D+QSG+L+ AEE+DYKT++SY ++ D A +LKYM+LCKIM+++ + +AG++++K + Y P + A++++ADA KRSLK F AL + K +L ED +V H +L +LE+ + R+IEPYS +E+++IA +I + + VE+ +++MILDKK G++DQ ++++ PKADA + +L+TI + K VD + R+ Sbjct: 234 LLTAKTNTNSAFASPQLQASVDMQSGVLYSAEERDYKTSFSYFYEAFEGFASIGDKINATSALKYMILCKIMLNETEQLAGLLAAKEIVAYQKSPRIIAIRSMADAFRKRSLKDFVKALAEHKIELVEDKVVAVHSQNLERNMLEKEISRVIEPYSEIELSYIARVIGMTVPPVERAIARMILDKKLMGSIDQHGDTVVVY--PKADAANQFTRSLKTIRELTKTVDVSYSRT 464
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: CSN2_DICDI (COP9 signalosome complex subunit 2 OS=Dictyostelium discoideum GN=csn2 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.710e-14 Identity = 49/177 (27.68%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 43 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLL-CKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQ 570 P G I G +H EK+++ A++ + + R + LKY++L C +M+S + S++A P++ AM + A+ K + FE L+D + + +DP + ++ L + Q L +L++PY+R+ I+ I++ + +P VE L +ILD K G++DQ Sbjct: 235 PRIMGIIRECGGKMHMAEKEWEKAHTDFFEAFKNYDEAGNSRRIQCLKYLVLACMLMLSTINPFD---STEAKPYKNDPDILAMTNLVMAYEKNDIYAFEKILKDNRKTIMDDPFIRMYIEDLLRNIRTQVLLKLLKPYTRIRISFISKELNIPSSDVESLLVSLILDNKIRGSIDQ 408
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: CSN2_XENLA (COP9 signalosome complex subunit 2 (Fragment) OS=Xenopus laevis GN=csn2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.500e-13 Identity = 50/195 (25.64%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 43 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPA 627 P G I G +H E +++ A++ + PR LKY++L +++ + S +A PE+ AM + A+ + FE L+ + + +DP + H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ L + + A Y A Sbjct: 229 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTA 421
BLAST of CX069593 vs. ExPASy Swiss-Prot
Match: CSN2_RAT (COP9 signalosome complex subunit 2 OS=Rattus norvegicus GN=Cops2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.500e-13 Identity = 50/195 (25.64%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 43 PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPA 627 P G I G +H E +++ A++ + PR LKY++L +++ + S +A PE+ AM + A+ + FE L+ + + +DP + H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ L + + A Y A Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTA 423 The following BLAST results are available for this feature:
BLAST of CX069593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069593 ID=CX069593; Name=CX069593; organism=Citrus sinensis; type=EST; length=844bpback to top |