CX069581

Overview
NameCX069581
Unique NameCX069581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069581 vs. ExPASy Swiss-Prot
Match: THIJ_ECOLI (Protein thiJ OS=Escherichia coli (strain K12) GN=thiJ PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.431e-15
Identity = 42/104 (40.38%), Postives = 68/104 (65.38%), Query Frame = 1
Query:  415 LIPIANGSEEIEIVTIVDILRRAKVDVVVASV--ERSTQIVASQGIKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 720
            L+ +A GSEE E VT +D+L R  + V  ASV  + +  I  S+G+K++AD  + + A+  YD+I+LPGG+ GAE  + S +L + +K+   +GRI  A+C++P
Sbjct:    6 LVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAP 109          
BLAST of CX069581 vs. ExPASy Swiss-Prot
Match: THIJ_SALTY (Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.187e-15
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 1
Query:  409 RVLIPIANGSEEIEIVTIVDILRRAKVDVVVASV--ERSTQIVASQGIKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSS 717
            + L+ +A GSEE E VT +D+L R  + V  ASV  + +  IV S+G+K++AD  + + A+  YD+I+LPGG+ GAE  + S +L + +K+   +GRI  A+C++
Sbjct:    4 QALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAA 108          
BLAST of CX069581 vs. ExPASy Swiss-Prot
Match: PARK7_MESAU (Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15
Identity = 41/105 (39.05%), Postives = 66/105 (62.86%), Query Frame = 1
Query:  409 RVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGIKIIADKSISDAA-ESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 720
            R L+ +A G+EE+E V  VDI+RRA + V VA +     +  S+ + I  D S+ DA  +  YD+++LPGG  GA+ L +S ++K++LKEQ+    +  A+C+ P
Sbjct:    5 RALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGP 109          
BLAST of CX069581 vs. ExPASy Swiss-Prot
Match: PARK7_MOUSE (Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.273e-15
Identity = 40/105 (38.10%), Postives = 66/105 (62.86%), Query Frame = 1
Query:  409 RVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGIKIIADKSISDA-AESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 720
            R L+ +A G+EE+E V  VD++RRA + V VA +     +  S+ + I  D S+ DA  +  YD+++LPGG  GA+ L +S ++K++LKEQ+    +  A+C+ P
Sbjct:    5 RALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGP 109          
BLAST of CX069581 vs. ExPASy Swiss-Prot
Match: PARK7_BOVIN (Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.273e-15
Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  409 RVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGIKIIADKSISDAA-ESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 720
            R L+ +A G+EE+E V  VD++RRA + V VA +     +  S+ + I  D S+ DA  E  YD+++LPGG  GA+ L +S  +K++LKEQ+    +  A+C+ P
Sbjct:    5 RALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGP 109          
BLAST of CX069581 vs. ExPASy Swiss-Prot
Match: PARK7_HUMAN (Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.211e-14
Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  409 RVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGIKIIADKSISDAA-ESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 720
            R L+ +A G+EE+E V  VD++RRA + V VA +     +  S+ + I  D S+ DA  E  YD+++LPGG  GA+ L +S  +K++LKEQ+    +  A+C+ P
Sbjct:    5 RALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGP 109          
BLAST of CX069581 vs. ExPASy Swiss-Prot
Match: PARK7_CERAE (Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.582e-14
Identity = 40/105 (38.10%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  409 RVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGIKIIADKSISDAA-ESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 720
            R L+ +A G+EE+E V  VD++RRA + V +A +     +  S+ + I  D S+ DA  E  YD+++LPGG  GA+ L +S  +K++LKEQ+    +  A+C+ P
Sbjct:    5 RALVILAKGAEEMETVIPVDVMRRAGIKVTIAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGP 109          
BLAST of CX069581 vs. ExPASy Swiss-Prot
Match: PARK7_RAT (Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.066e-14
Identity = 40/105 (38.10%), Postives = 66/105 (62.86%), Query Frame = 1
Query:  409 RVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGIKIIADKSISDA-AESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 720
            R L+ +A G+EE+E V  VDI+RRA + V VA +     +  S+ + I  D S+ +A  +  YD+++LPGG  GA+ L +S ++K++LKEQ+    +  A+C+ P
Sbjct:    5 RALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVVICPDTSLEEAKTQGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGP 109          
BLAST of CX069581 vs. ExPASy Swiss-Prot
Match: PARK7_DANRE (Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.602e-14
Identity = 39/105 (37.14%), Postives = 66/105 (62.86%), Query Frame = 1
Query:  409 RVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGIKIIADKSISDA-AESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 720
            R L+ +A G+EE+E V  VD++RRA + V VA +     +  S+ + I  D S+ DA  +  YD+++LPGG+ GA+ L +S  +K++LK+Q+    +  A+C+ P
Sbjct:    5 RALVILAKGAEEMETVIPVDVMRRAGIAVTVAGLAGKEPVQCSREVMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGP 109          
BLAST of CX069581 vs. ExPASy Swiss-Prot
Match: PARK7_CHICK (Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.850e-14
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  409 RVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGIKIIADKSISDAA-ESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 720
            R L+ +A G+EE+E V   D++RRA + V VA +     +  S+ + I  D S+ DA  E  YD+I+LPGG  GA+ L +S  +K +LK+Q+    +  A+C+ P
Sbjct:    5 RALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKEPVQCSRDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGP 109          
The following BLAST results are available for this feature:
BLAST of CX069581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
THIJ_ECOLI1.431e-1540.38Protein thiJ OS=Escherichia coli (strain K12) GN=t... [more]
THIJ_SALTY3.187e-1540.00Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=... [more]
PARK7_MESAU5.436e-1539.05Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1... [more]
PARK7_MOUSE9.273e-1538.10Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1[more]
PARK7_BOVIN9.273e-1539.05Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1[more]
PARK7_HUMAN1.211e-1439.05Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2[more]
PARK7_CERAE1.582e-1438.10Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE... [more]
PARK7_RAT2.066e-1438.10Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV... [more]
PARK7_DANRE4.602e-1437.14Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1[more]
PARK7_CHICK7.850e-1438.10Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_11E03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11E03-J5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069581 ID=CX069581; Name=CX069581; organism=Citrus sinensis; type=EST; length=801bp
CTGGATCAGTACGGTTAAGAGATTGTGAAATTCTCAAGAAAATTACAAGC
AAACAAGCGGAGGAAAAAAGGCTTTATGGTGCTATATGTGCTGCTCCAGC
AGTCACACTTCTGCCATGGGGCCTTCTGAGAAGAAAGCAGTTTGTCATGC
AAGATAACTTGCCACCCAGCATTCACAGATAAGCTTCCAACATTCTGGGC
TGTAAAATCAAATATCCATGTTTCCGGAGAGGTTACAACAAGCCGTGGTC
CTGGAACTTCTTTTGAATTTGCTTTGTGCTTGGTAGAACAGCTGTTTGGA
GAGTCTGTTGCCAAGGAGATTGGAGAATTATTGCTGATGCATAATGCTGA
TGATTCTCTCAAAAAGGAAGAATTCAATGAAGTTGAATGGTTCTTTGACT
GCATGCCTCGCGTTCTGATTCCAATTGCAAATGGTTCTGAAGAGATTGAA
ATAGTGACTATTGTGGATATTTTGAGGCGAGCAAAAGTGGATGTTGTGGT
TGCTTCAGTTGAAAGATCCACACAGATTGTGGCATCTCAAGGCATAAAAA
TTATTGCTGATAAATCAATTAGTGATGCTGCTGAGTCAGTGTATGATTTA
ATCATTCTTCCGGGAGGGGTTGCTGGGGCTGAAAGGCTGCAGAAATCTAG
GATTTTGAAGAAGCTGCTCAAAGAACAAAAAGTAGCTGGAAGAATATACG
GAGCAGTTTGTTCTTCACCAATAGTCCTCCATAAACATGGTTTACTGAAG
GCGAAGAAAGCCACGGCTCATCCCTCGGTCATTGGCAAGCTGACCAATGA
A
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