DR403914

Overview
NameDR403914
Unique NameDR403914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6140 contig Csv1_Contig6140:1..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403914 vs. ExPASy Swiss-Prot
Match: AROD2_ARATH (Arogenate dehydratase/prephenate dehydratase 2, chloroplastic OS=Arabidopsis thaliana GN=ADT2 PE=1 SV=1)

HSP 1 Score: 405.216 bits (1040), Expect = 1.652e-112
Identity = 203/227 (89.43%), Postives = 212/227 (93.39%), Query Frame = 1
Query:    4 GVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKYVSFEQLKDTGAVASSSAAAIYGLNILAEDIQDDCDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQPLRSS 684
            GVRGAYSESAAEKAYPNCEAVPCE+FDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRH LHIVGEVK AVRHCLLAN GV +EDL+RVLSHPQALAQCENTLTKLGLVREAVDDTAGAAK ++FE L D  AVAS  AA IYGLNI+A+DIQDDCDNVTRFLMLAREPIIPGT+R FKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLR  PLR+S
Sbjct:  105 GVRGAYSESAAEKAYPNCEAVPCEEFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHNLHIVGEVKLAVRHCLLANHGVNIEDLRRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKQIAFENLNDAAAVASEKAAKIYGLNIVAKDIQDDCDNVTRFLMLAREPIIPGTNRLFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRKHPLRAS 331          
BLAST of DR403914 vs. ExPASy Swiss-Prot
Match: AROD6_ARATH (Arogenate dehydratase/prephenate dehydratase 6, chloroplastic OS=Arabidopsis thaliana GN=ADT6 PE=1 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 6.754e-90
Identity = 164/230 (71.30%), Postives = 191/230 (83.04%), Query Frame = 1
Query:    4 GVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGL--VREAVDDTAGAAKYVSFEQLKDTGAVASSSAAAIYGLNILAEDIQDDCDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQPLRSSD 687
            GV GAYSE+AA KAYPNC+A+PC+QF+ AF+AVE W+ DRAVLP+ENSLGGSIHRNYDLLLRHRLHIVGEV+  V HCLLA PGV+ E L RV+SHPQ LAQCE+TLTKLGL   REAVDDTAGAA++++   L+DT A+AS+ AA IYGL IL + IQDD  NVTRF+MLAREPIIP TDRPFKTSIVF+ E+G  VLFK L+ FA R I+LTKIESRP  N+P+R  D
Sbjct:  122 GVPGAYSEAAAGKAYPNCQAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIASNNLRDTAAIASARAAEIYGLEILEDGIQDDVSNVTRFVMLAREPIIPRTDRPFKTSIVFAHEKGTSVLFKVLSAFAFRDISLTKIESRPNHNRPIRVVD 351          
BLAST of DR403914 vs. ExPASy Swiss-Prot
Match: AROD3_ARATH (Arogenate dehydratase 3, chloroplastic OS=Arabidopsis thaliana GN=ADT3 PE=1 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 7.467e-89
Identity = 162/230 (70.43%), Postives = 190/230 (82.61%), Query Frame = 1
Query:    4 GVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGL--VREAVDDTAGAAKYVSFEQLKDTGAVASSSAAAIYGLNILAEDIQDDCDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQPLRSSD 687
            GV GAYSE+AA KAYPNC+A+PC+QF+ AF+AVE W+ DRAVLP+ENSLGGSIHRNYDLLLRHRLHIVGEV+  V HCL+A PGV+ E L RV+SHPQ LAQCE+TLTKLGL   REAVDDTAGAA++++   ++DT A+AS+ AA IYGL IL + IQDD  NVTRF+MLAREPIIP TDRPFKTSIVF+ E+G  VLFK L+ FA R I+LTKIESRP  N P+R  D
Sbjct:  127 GVPGAYSEAAAGKAYPNCQAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLIALPGVRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIAANNIRDTAAIASARAAEIYGLEILEDGIQDDASNVTRFVMLAREPIIPRTDRPFKTSIVFAHEKGTCVLFKVLSAFAFRNISLTKIESRPNHNVPIRLVD 356          
BLAST of DR403914 vs. ExPASy Swiss-Prot
Match: AROD1_ARATH (Arogenate dehydratase/prephenate dehydratase 1, chloroplastic OS=Arabidopsis thaliana GN=ADT1 PE=1 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.274e-88
Identity = 167/228 (73.25%), Postives = 188/228 (82.46%), Query Frame = 1
Query:    4 GVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKYVSFEQLKDTGAVASSSAAAIYGLNILAEDIQDDCDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQPLRSSD 687
            G+ GAYSE+AA KA+PNCE VPCEQF+ AF+AVE WLVD+AVLPIENS+GGSIHRNYDLLLRHRLHIV EV   V HCLL  PGVK ED+K VLSHPQAL QC N+L  LG+ R +  DTA AA+ VS     D GA+AS  AA IYGL+ILAE+IQDD +NVTRFL+LAREP+IP TDRP+KTSIVFSLEEGPGVLFKALAVFALR INL+KIESRP R +PLR  D
Sbjct:  112 GIPGAYSETAALKAFPNCETVPCEQFEAAFQAVELWLVDKAVLPIENSVGGSIHRNYDLLLRHRLHIVQEVHLPVNHCLLGVPGVKKEDIKCVLSHPQALDQCVNSLNNLGIQRISAKDTATAAQTVSSSGKIDVGAIASVRAANIYGLDILAENIQDDVNNVTRFLILAREPMIPRTDRPYKTSIVFSLEEGPGVLFKALAVFALRSINLSKIESRPQRRRPLRVVD 339          
BLAST of DR403914 vs. ExPASy Swiss-Prot
Match: AROD4_ARATH (Arogenate dehydratase 4, chloroplastic OS=Arabidopsis thaliana GN=ADT4 PE=1 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 7.996e-83
Identity = 158/229 (69.00%), Postives = 182/229 (79.48%), Query Frame = 1
Query:    4 GVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKL--GLVREAVDDTAGAAKYVSFEQLKDTGAVASSSAAAIYGLNILAEDIQDDCDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEE--GPGVLFKALAVFALRQINLTKIESRPLRNQPLR 678
            GV GAYSE+AA KAYPNC+A+PC+QFD AF+AVE W+ DRAVLP+ENSLGGSIHRNYDLLLRHRLHIVGEV+  V HCLLA PGV+ + + RV+SHPQALAQ E++L  L     REA  DTA AA+Y+S   L DT AVAS+ AA +Y L ILA+ IQDD  NVTRFLMLAREPIIP TDRPFKTSIVF+ +E  G  VLFK L+ FA R I+LTKIESRP  N+PLR
Sbjct:  131 GVPGAYSEAAAGKAYPNCDAIPCDQFDVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQIPVHHCLLALPGVRTDCVSRVISHPQALAQTEHSLDVLTPHAAREAFHDTAAAAEYISANDLHDTAAVASARAAELYNLQILADGIQDDPGNVTRFLMLAREPIIPRTDRPFKTSIVFAAQEHKGTSVLFKVLSAFAFRDISLTKIESRPHHNRPLR 359          
BLAST of DR403914 vs. ExPASy Swiss-Prot
Match: AROD5_ARATH (Arogenate dehydratase 5, chloroplastic OS=Arabidopsis thaliana GN=ADT5 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.508e-81
Identity = 156/229 (68.12%), Postives = 181/229 (79.04%), Query Frame = 1
Query:    4 GVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKL--GLVREAVDDTAGAAKYVSFEQLKDTGAVASSSAAAIYGLNILAEDIQDDCDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEE--GPGVLFKALAVFALRQINLTKIESRPLRNQPLR 678
            GV GAYSE+AA KAYPN EA+PC+QFD AF+AVE W+ DRAVLP+ENSLGGSIHRNYDLLLRHRLHIVGEV+  V HCLLA PGV+ + + RV+SHPQALAQ E +L KL      EA  DTA AA+Y++   L DT AVAS+ AA +YGL ILA+ IQDD  NVTRFLMLAR+PIIP TDRPFKTSIVF+ +E  G  VLFK L+ FA R I+LTKIESRP +N P+R
Sbjct:  132 GVPGAYSEAAAGKAYPNSEAIPCDQFDVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQIPVHHCLLALPGVRTDCITRVISHPQALAQTEGSLNKLTPKAAIEAFHDTAAAAEYIAANNLHDTAAVASARAAELYGLQILADGIQDDAGNVTRFLMLARDPIIPRTDRPFKTSIVFAAQEHKGTSVLFKVLSAFAFRNISLTKIESRPHQNCPVR 360          
BLAST of DR403914 vs. ExPASy Swiss-Prot
Match: PHEA_HAEIN (P-protein OS=Haemophilus influenzae GN=pheA PE=4 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 75/228 (32.89%), Postives = 124/228 (54.39%), Query Frame = 1
Query:    4 GVRGAYSESAAEKAYPNCEA----VPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGLVR-EAVDDTAGAAKYVSFEQLKDTGAVASSSAAAIYGLNILAEDIQDDCDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQP 672
            G RG+YS  AA       +     + C+ F+  FE V+    D  VLP+EN+  G+I+  YDLL    L +VGE+ + ++HC+L N    +  +  + SHPQ + QC   +  L  V  E  + ++ A + V+     +  A+ +     +YGL++L  +I +  +N+TRF+++A+EP    +  P KT ++ +  +  G L  AL VF   QIN+TK+ESRP+  +P
Sbjct:  110 GKRGSYSNLAARNYAARYQKQFVELGCQSFEQVFEKVQTGEADFGVLPLENTTSGAINEVYDLLQHTDLSLVGELAYPIKHCVLVNDKTDLNQIDTLYSHPQVIQQCSQFIHSLDRVHIEYCESSSHAMQLVASLNKPNIAALGNEDGGKLYGLSVLKTNIANQENNITRFIVVAKEPREVSSQIPTKTLLLMTTSQQAGALVDALLVFKKHQINMTKLESRPIYGKP 337          
BLAST of DR403914 vs. ExPASy Swiss-Prot
Match: PHEA_METJA (Prephenate dehydratase OS=Methanocaldococcus jannaschii GN=pheA PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.067e-30
Identity = 87/226 (38.50%), Postives = 130/226 (57.52%), Query Frame = 1
Query:   10 RGAYSESAAEKAYPNCEA-VPCEQFDTAFEAVERWLVDR---AVLPIENSLGGSIHRNYDLLLRHR-LHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKYVSFEQLKDTGAVASSSAAAIYGLNILAEDIQDDCDNVTRFLMLAREPIIPGTDRPFKTSIVFSL-EEGPGVLFKALAVFALRQINLTKIESRPLRNQ 669
            +G YSE A +K     +     +  ++ ++  ER  VD     V+PIENS+ GS+    DLLL+ + + I+GE+   + H L+   G     +K V+SHPQALAQC N + K G   +AV+ TA A K V+  + +  GA+ S  +A  Y L IL E+I+D  +N TRF+++ ++       + +K SIVF L E+ PG L+  L  FA R INLT+IESRP + +
Sbjct:   11 KGTYSEKATKKFLDYIDGDYKIDYCNSIYDVFER--VDNNGLGVVPIENSIEGSVSLTQDLLLQFKDIKILGELALDIHHNLI---GYDKNKIKTVISHPQALAQCRNYIKKHGWDVKAVESTAKAVKIVAESKDETLGAIGSKESAEHYNLKILDENIEDYKNNKTRFILIGKKVKFKYHPKNYKVSIVFELKEDKPGALYHILKEFAERNINLTRIESRPSKKR 231          
BLAST of DR403914 vs. ExPASy Swiss-Prot
Match: PHEA_PSEAE (P-protein OS=Pseudomonas aeruginosa GN=pheA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.026e-29
Identity = 82/224 (36.61%), Postives = 121/224 (54.02%), Query Frame = 1
Query:    4 GVRGAYSESAAEKAYPNCE-AVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTK--LGLVREAVDDTAGAAKYVSFEQLKDTGAVASSSAAAIYGLNILAEDIQDDCDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRN 666
            G  G ++++AA K + N   + P    D  F  V    V+  V+P+ENS  G+++   D  L H + I GEV+  + H LL     K +++ R+ SH Q+LAQC   L      + R AV   A AAK V  E   ++ A+A   AA++Y L+ L E I+D  DN TRFL++  + + P  D   KTSI+ S+   PG L + L  F    I+LT+IE+RP R+
Sbjct:  101 GPEGTFTQAAALKHFGNAVISTPMAAIDEVFREVAAGAVNFGVVPVENSTEGAVNHTLDSFLEHDMVICGEVELRIHHHLLVGETTKTDNITRIYSHAQSLAQCRKWLDSHYPSVERVAVSSNADAAKRVKSEW--NSAAIAGDMAASLYDLSKLHEKIEDRPDNSTRFLIIGNQEVPPTGDD--KTSIIVSMRNKPGALHELLVPFHNNGIDLTRIETRPSRS 320          
BLAST of DR403914 vs. ExPASy Swiss-Prot
Match: PHEA_BUCAP (P-protein OS=Buchnera aphidicola subsp. Schizaphis graminum GN=pheA PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.984e-29
Identity = 71/228 (31.14%), Postives = 123/228 (53.95%), Query Frame = 1
Query:    4 GVRGAYSESAA----EKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLLANPGVKVEDLKRVLSHPQALAQCENTLTKLGLVR-EAVDDTAGAAKYVSFEQLKDTGAVASSSAAAIYGLNILAEDIQDDCDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQP 672
            G +G+YS  AA    E+ +  C    C  F+   ++VE    D AVLPIENS  G I+  +D+L +  L I+GE+  ++ HCLLA   +++  +K V SHPQ   QC   + K    + +  + TA A K +    +    A+ S   + IYGL +L +++ +   N+TRF++L+R+P+   +  P KT+++F+  +  G L + L +    ++ + K+ S+ +   P
Sbjct:  110 GPKGSYSHIAASQYAEQNFKTCIENACLSFNEVIQSVENNQTDYAVLPIENSCSGFINEIFDILKKTNLFIIGEINISINHCLLAIKKIELNKIKAVYSHPQPFQQCSYFIKKFPNWKIQYTNSTADAMKKIVKYNITTNAALGSELGSKIYGLKVLYKNLANKKKNITRFILLSRKPVSISSKIPTKTTLIFNTGQESGALAEVLLILKKNKLIMKKLTSQNIYKNP 337          
The following BLAST results are available for this feature:
BLAST of DR403914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
AROD2_ARATH1.652e-11289.43Arogenate dehydratase/prephenate dehydratase 2, ch... [more]
AROD6_ARATH6.754e-9071.30Arogenate dehydratase/prephenate dehydratase 6, ch... [more]
AROD3_ARATH7.467e-8970.43Arogenate dehydratase 3, chloroplastic OS=Arabidop... [more]
AROD1_ARATH1.274e-8873.25Arogenate dehydratase/prephenate dehydratase 1, ch... [more]
AROD4_ARATH7.996e-8369.00Arogenate dehydratase 4, chloroplastic OS=Arabidop... [more]
AROD5_ARATH1.508e-8168.12Arogenate dehydratase 5, chloroplastic OS=Arabidop... [more]
PHEA_HAEIN8.391e-3232.89P-protein OS=Haemophilus influenzae GN=pheA PE=4 S... [more]
PHEA_METJA2.067e-3038.50Prephenate dehydratase OS=Methanocaldococcus janna... [more]
PHEA_PSEAE1.026e-2936.61P-protein OS=Pseudomonas aeruginosa GN=pheA PE=3 S... [more]
PHEA_BUCAP2.984e-2931.14P-protein OS=Buchnera aphidicola subsp. Schizaphis... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246K15 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246K15 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403914 ID=DR403914; Name=DR403914; organism=Citrus sinensis; type=EST; length=689bp
GGGGGAGTTCGTGGAGCTTACAGCGAGTCAGCAGCAGAGAAAGCATACCC
AAATTGCGAAGCGGTTCCTTGCGAGCAATTTGACACTGCTTTTGAAGCTG
TCGAGAGGTGGCTTGTAGACAGAGCAGTTTTACCCATTGAGAATTCTTTG
GGTGGCAGCATCCACAGAAATTATGATCTCTTACTCCGGCACAGGTTGCA
CATAGTAGGGGAAGTTAAATTTGCTGTCCGACATTGCCTACTAGCCAATC
CTGGTGTTAAAGTTGAGGACTTGAAAAGGGTTCTAAGCCATCCTCAGGCT
CTTGCTCAATGTGAGAACACACTAACGAAATTAGGGTTAGTCAGGGAAGC
GGTGGACGATACTGCAGGTGCAGCAAAGTATGTATCATTCGAGCAACTAA
AAGATACGGGAGCTGTTGCTAGCTCTTCTGCTGCAGCGATCTATGGTTTA
AATATACTTGCTGAGGATATTCAGGATGATTGTGATAATGTTACTCGATT
TCTAATGCTAGCTAGGGAGCCCATTATTCCAGGCACGGATAGACCATTCA
AGACAAGTATAGTTTTCTCATTAGAGGAGGGTCCTGGAGTGCTTTTCAAG
GCACTTGCTGTATTTGCTTTAAGGCAAATCAACCTTACAAAGATTGAAAG
CCGTCCTTTGAGGAATCAGCCATTGCGATCATCTGATGA
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