CX069522

Overview
NameCX069522
Unique NameCX069522
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig402 contig Csv1_Contig402:588..1474. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX069522 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 8.283e-71
Identity = 119/158 (75.32%), Postives = 140/158 (88.61%), Query Frame = -1 
Query:  419 NDSNANSALDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEATGFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQ 892
            N     + ++KRFKTLP  E+LPRNE +GGYIFVCNNDTMQE+LKRQLFGLPPRYRDSVRAITPGLPLFLYNY+THQLHG+FEA  FGG+NIDPTAWEDKK +GESRFPAQVR+  RK+C+ LEED+FRP+LHHYDGPKFRLEL++PE + L+D+ E+
Sbjct:   47 NGGENKNGVEKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEE 204
The following BLAST results are available for this feature:
BLAST of CX069522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B2_DAUCA8.283e-7175.32B2 protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_11A06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-11A06-B11-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069522 ID=CX069522; Name=CX069522; organism=Citrus sinensis; type=EST; length=892bp
CTTTTTTTTTTTCCAGAGAGTTAAACAAGGTCTCAATCCTTTCAAATTAT
CCAAACATCATAAAACACAAGACAATCATCAGAAACTCATATTACATACA
CAGGACAGAGATATTAAAGCCTTCATGTTTAAAGGCGCGCACATTCTTTC
TCTTTCACATCTTGCAAGTCTGTCTTTAAGACTGCATTACTATCAAATGT
AATACATACTGCAAATGCTCAAGAAGTAGCTTCATGAGACGAAAATATTT
TATTTAGTTGACTCACACAACATTTCCTACTTTTCACAGGAAGATTCATA
CAACCAGACTTTTACCATAGCTTGCGCTCTTGAGGAAAATCGGTGAAAAG
CAGGCAGCTCACATCCTACCACATTTGCCAATTCCGCTAAAATATTATGC
TTATGCAGCAGAGCCCGCTTGTTCACAAAGATCCATTAGATCAAGAGTCT
CAGGAACAGAGAGCTCAAGACGAAATTTAGGACCATCGTAGTGATGCAAG
ACAGGCCTAAAAGCATCTTCTTCCAATGCCTTGCACAGTTTTCTTACCCG
GATCCTTACCTGAGCAGGAAACCTTGATTCCCCTTTACACTTTTTGTCCT
CCCAGGCTGTTGGGTCAATGTTGGAGCCTCCAAAACCAGTTGCCTCAAAT
ATTCCATGCAGTTGGTGAGTAGTATAGTTGTAGAGAAAAAGAGGTAAGCC
TGGTGTTATAGCACGGACGGAATCCCTATATCTTGGAGGTAAACCAAAAA
GCTGGCGTTTTAAATCTTCCTGCATTGTGTCGTTGTTGCAGACAAAGATG
TACCCTCCTAGCACCTCATTTCTCGGAAGTGTCTCTGTTGCAGGCAAAGT
CTTGAACCTTTTGTCAAGCGCACTGTTTGCGTTGCTATCATT
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