CX069507

Overview
NameCX069507
Unique NameCX069507
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069507_ssr10 microsatellite CX069507_ssr10:10..33. BLAST: Citrus ESTs to Prunus persica proteins V1
CX069507_ssr702 microsatellite CX069507_ssr702:702..719. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10809 contig Csv1_Contig10809:433..1244. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069507 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.485e-68
Identity = 130/168 (77.38%), Postives = 144/168 (85.71%), Query Frame = -1
Query:  343 AQVVGWPPVRSFRKNIMAVQK----DNEEGDNK--------AXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 810
            AQVVGWPPVRSFRKN+M+ QK    D  EG++K        +     + VA+VKVSMDGAPYLRK+DLKLYK+YQ+LS+AL KMFSSFTIGN G QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW+MFVDSCKR+RIMKGSEAIGLAPRA+EKCKNRS
Sbjct:   69 AQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236          
BLAST of CX069507 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.371e-66
Identity = 126/157 (80.25%), Postives = 135/157 (85.99%), Query Frame = -1
Query:  343 QVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAI--GLAPRAVEKCKNRS 807
            QVVGWPPVRSFRKN++AVQK   E   K       N +FVKVSMDGAPYLRKVDLK+YKSY+ELSD+LGKMFSSFT GNC SQGMKDFMNESKL DLLN SDYVPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKG EAI  GLAPRA+ KCKNRS
Sbjct:   90 QVVGWPPVRSFRKNMLAVQKSVGEESEK---NSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 243          
BLAST of CX069507 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.699e-64
Identity = 124/160 (77.50%), Postives = 135/160 (84.38%), Query Frame = -1
Query:  343 AQVVGWPPVRSFRKNIMAVQ----KDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 810
            AQVVGWPPVRS+RKNI+AVQ    KD  +G         +  AFVKVSMDGAPYLRKVDLK+YKSY ELS AL KMFSSFTIGNCGS G+   MNESK+ DLLNGS+YVPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKGSEAIGLAPRA+EKCKNRS
Sbjct:  119 AQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG-MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277          
BLAST of CX069507 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 2.454e-63
Identity = 119/156 (76.28%), Postives = 135/156 (86.54%), Query Frame = -1
Query:  343 AQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 810
            AQVVGWPPVR++RKN+MA QK  E    +A       VAFVKVSMDGAPYLRKVDLK+Y SY++LSDAL KMFSSFT+G+ G+QGM DFMNESK++DLLN S+YVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRA+EK KNRS
Sbjct:   75 AQVVGWPPVRNYRKNVMANQKSGEA--EEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228          
BLAST of CX069507 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.031e-61
Identity = 119/163 (73.01%), Postives = 137/163 (84.05%), Query Frame = -1
Query:  343 AQVVGWPPVRSFRKNIMAVQKDN---EEGDNKAXXXXXSNVA---FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK-CKNRS 810
            AQVVGWPPVR++RKN+M  QK +   EE  ++         A    VKVSMDGAPYLRKVDLK+YKSYQ+LSDAL KMFSSFT+GN G+QGM DFMNESKL++LLN S+YVP+YEDKDGDWMLVGDVPW+MFV+SCKRLRIMKGSEA+GLAPRA+EK CKNRS
Sbjct:   81 AQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS 243          
BLAST of CX069507 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.012e-57
Identity = 109/157 (69.43%), Postives = 129/157 (82.17%), Query Frame = -1
Query:  343 AQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIG-NCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 810
            AQVVGWPPVRS+RKN+M   + +  G   A        AFVKVSMDGAPYLRK+DL++YKSY ELS+AL  MFSSFT+G + G +GM DFMNE KL+DL+N  DYVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGLAPRA+EKCK+R+
Sbjct:   81 AQVVGWPPVRSYRKNVMVSCQKSSGGPEAA--------AFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA 229          
BLAST of CX069507 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.698e-53
Identity = 105/164 (64.02%), Postives = 124/164 (75.61%), Query Frame = -1
Query:  343 AQVVGWPPVRSFRKNIMAVQKDNEEGDN------KAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 810
            AQVVGWPP+RSFRKN MA  +  + G+N      +A         +VKVSM+GAPYLRK+DLK YKSY ELS AL KMFS FTIG  GS G   +D +NES+L DLL GS+YV TYEDKD DWMLVGDVPW+MF+ SCK+LRIMK SEAIGLAPR +EKC++R+
Sbjct:  142 AQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN 305          
BLAST of CX069507 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.814e-51
Identity = 103/161 (63.98%), Postives = 125/161 (77.64%), Query Frame = -1
Query:  343 AQVVGWPPVRSFRKNIMAVQ-KDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL--APRAVEKCKNRS 810
            AQ+VGWPPVRS+RKN +A   K+++E D +          FVKVSMDGAPYLRKVDL+ Y +Y ELS AL KMF++FT+G CGS G   KD ++E+KL DLLNG DYV TYEDKDGDWMLVGDVPW+MF+D CK+L+IMKG +AIGL  APRA+EK K R+
Sbjct:  182 AQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGS----GALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMRA 338          
BLAST of CX069507 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.188e-51
Identity = 101/159 (63.52%), Postives = 124/159 (77.99%), Query Frame = -1
Query:  346 AQVVGWPPVRSFRKNIMA--VQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNR 810
            AQVVGWPP+RS+RKN MA    K+ +E D K        V FVKVSMDGAPYLRKVDL+ Y SYQ+LS AL KMFS FT+G CG  G   ++ M+E KL DLL+GS++V TYEDKDGDWMLVGDVPW++F ++C++L+IMKGS++IGLAP AVEK KN+
Sbjct:  164 AQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGL----GVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318          
BLAST of CX069507 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.307e-50
Identity = 100/160 (62.50%), Postives = 125/160 (78.12%), Query Frame = -1
Query:  343 AQVVGWPPVRSFRKNIMAVQKDNEEG--DNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 810
            AQVVGWPP+RS+RKN MA+ +   +G  D +A     S   +VKVSMDGAPYLRKVDLK+YK+Y+ELS AL KMFS FT+G+  S G   +D +++ +L+DL NG++ V TYEDKD DWMLVGDVPW MF DSC+RLRIMKGS+A+GLAPRA +K KNR+
Sbjct:  107 AQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNRN 266          
The following BLAST results are available for this feature:
BLAST of CX069507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
IAA16_ARATH1.485e-6877.38Auxin-responsive protein IAA16 OS=Arabidopsis thal... [more]
AUX28_SOYBN2.371e-6680.25Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]
IAA30_ORYSJ1.699e-6477.50Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA14_ARATH2.454e-6376.28Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]
IAA7_ARATH1.031e-6173.01Auxin-responsive protein IAA7 OS=Arabidopsis thali... [more]
IAA17_ARATH2.012e-5769.43Auxin-responsive protein IAA17 OS=Arabidopsis thal... [more]
IAA27_ARATH6.698e-5364.02Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]
IAA9_ARATH2.814e-5163.98Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA8_ARATH8.188e-5163.52Auxin-responsive protein IAA8 OS=Arabidopsis thali... [more]
IAA21_ORYSJ5.307e-5062.50Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10H07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10H07-O14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069507 ID=CX069507; Name=CX069507; organism=Citrus sinensis; type=EST; length=810bp
AAAATAAGATATTATTATTATTATTATTATTATTGGAACAATAAACTCAA
GTTACAGAAGTGGGAAGTTGGAGACTTATAAACATGTTCTAATAATATTT
AATTATTGCTTCTTGTCACTAAACAAATCTCTCTCAGAATATATTCCAAC
TCTCTACTAATTACTAACATTTTAAAAACAAAAACCCAAAAAAGAGAAAG
AAAAAAAAACGCATGATACATAAGCACATCCAAACTCCCTGCTTGATTCC
TCAACAAGCCGGGTTTGCCTTTTTGGTTTTGAAATCAGCTTTTTTAACAA
GCTGCTTTTGGCAAAAAGTTGCTGATCATAATCAAATCTTCAGCTTCTGT
TCTTGCACTTCTCAACTGCCCTTGGTGCAAGTCCAATGGCCTCGGATCCT
TTCATTATTCTTAAGCGTTTGCATGAATCAACAAACATATCCCATGGTAC
ATCACCAACAAGCATCCAATCTCCATCTTTGTCTTCATAAGTAGGTACAT
AATCTGAGCCATTCAAAAGATCAATCAGTTTGCTCTCATTCATAAAATCC
TTCATCCCTTGTGACCCACAGTTACCAATGGTGAAAGAGCTGAACATTTT
GCCAAGGGCATCAGAGAGTTCTTGGTAGCTTTTGTATAGCTTCAAATCAA
CCTTGCGCAAGTATGGGGCACCATCCATGCTCACTTTAACAAAAGCTACA
TTGCTGCTGCTGCTGCTGCTAGCCTTATTATCACCTTCTTCATTGTCCTT
TTGGACGGCCATGATGTTCTTTCTGAATGATCTAACGGGTGGCCAACCCA
CAACTTGTGC
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