CX069506

Overview
NameCX069506
Unique NameCX069506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5664 contig Csv1_Contig5664:309..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069506 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 401.749 bits (1031), Expect = 2.295e-111
Identity = 184/235 (78.30%), Postives = 206/235 (87.66%), Query Frame = -2
Query:   82 FASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLFELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECVHHRH 786
            F S+SKYLFGKVSIQIKLV GDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPY+VQTN+YVNGVGNREQRL+LWFDPT EFHTYS+LW++R VVF+VDETPIRV  NLE KGIPF KDQAMGVYSSIWNADDWATQGG VKTDWSHAPFVASYK F+IDACE P +     +  KC  + +++FWWDEPT+ EL++HQ+HQL+WVRANH+IYDYC D +RFP  P EC HHRH
Sbjct:   61 FESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTT----DLSKC--NGDQKFWWDEPTVSELSLHQNHQLIWVRANHMIYDYCFDATRFPVTPLECQHHRH 289          
BLAST of CX069506 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.660e-77
Identity = 138/235 (58.72%), Postives = 169/235 (71.91%), Query Frame = -2
Query:   85 FASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLFELNVHQSHQLMWVRANHLIYDYCTDTSRFPAI-PTECVHHR 786
            F SK  YLFG  S+ IK+V GDSAGTVTAFY+SS    H+E DFEFLGN TG+PY++QTNV+  G G+REQR+ LWFDPTKE+H YS+LWN  Q+VF VDE PIRV  N +  G+ FP DQ M +Y+S+WNADDWAT+GG  KTDWS APF+A+YKGF ID CE  ASV    NAK C +  ++  WWD+P   +L+  Q  +L WVR  + IY+YCTDT R+P I P EC   R
Sbjct:   67 FQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCE--ASV----NAKFCDTQGKR--WWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPECKRDR 293          
BLAST of CX069506 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.405e-76
Identity = 131/234 (55.98%), Postives = 166/234 (70.94%), Query Frame = -2
Query:   85 FASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLFELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECVHHR 786
            F ++  YLFG  S+ IKLVGGDSAGTVTAFY+SS    H+E DFEFLGN TG+PY++QTNV+  G G+REQR+ LWFDPTK++H+YS+LWN   + F VD+TPIRV  N +  G+ +P DQ M +YSS+WNADDWAT+GGR KTDWS APFVASY+GF +D CE  A       AK C++   +  WWD+P   +L+  Q  +L WVR  H IY+YCTD  R+ A+  EC   R
Sbjct:   66 FQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASA------EAKFCATQGAR--WWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPECKRDR 291          
BLAST of CX069506 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.405e-76
Identity = 132/234 (56.41%), Postives = 168/234 (71.79%), Query Frame = -2
Query:   85 FASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLFELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECVHHR 786
            F SK  YLFG  S+ IK+V GDSAGTVTAFY+SS    H+E DFEFLGN TG+PY++QTNV+  G GNREQR++LWFDP+K++H+YS+LWN  Q+VF VD+ PIRV  N +  G+ FP +Q M +YSS+WNADDWAT+GG  KT+W  APFVASY+GF +D CE  ASV    NAK C +  ++  WWD+    +L+ +Q  +L WVR  + IY+YCTD  RFP  P EC   R
Sbjct:   66 FQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCE--ASV----NAKFCETQGKR--WWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPECRRDR 291          
BLAST of CX069506 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.554e-75
Identity = 133/234 (56.84%), Postives = 165/234 (70.51%), Query Frame = -2
Query:   85 FASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLFELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECVHHR 786
            F SK  YLFG  S+ IKLV GDSAGTVTAFY+SS    H+E DFEFLGN TG+PY++QTNV+  G G+REQR+ LWFDPT ++H YS+LWN  Q+VF VD+ PIRV  N    G+ FP +Q M +Y+S+WNADDWAT+GG  KTDWS APF+ASYKGF ID CE  ASV    NAK C +  ++  WWD+P   +L+  Q  +L WVR  + IY+YCTD  R+  +P EC   R
Sbjct:   65 FQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCE--ASV----NAKFCDTQGKR--WWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPECTRDR 290          
BLAST of CX069506 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.718e-74
Identity = 131/234 (55.98%), Postives = 167/234 (71.37%), Query Frame = -2
Query:   85 FASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLFELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECVHHR 786
            F +K  YLFG  S+ IK+V GDSAGTVTAF +SS    H+E DFEFLGN TG+PY++QTNV+  G G+REQR+ LWFDPTK +H YS+LWN  Q+VFLVD  PIRV  NL+  G+ FP +Q M VY+S+WNADDWAT+GG  KTDWS APFVA YKGF +D CE  ASV    N++ C++  ++  WWD+    +L+  Q  +L WVR    IY+YCTD +R+P +P EC  +R
Sbjct:   66 FQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCE--ASV----NSRFCATQGKR--WWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPECRRNR 291          
BLAST of CX069506 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.231e-73
Identity = 130/234 (55.56%), Postives = 163/234 (69.66%), Query Frame = -2
Query:   85 FASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLFELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECVHHR 786
            F SK  YLFG  S+ IKL  GD+AG VTAFY+SS    H+E DFEFLGN TG+P ++QTNV+  G GNREQR+ LWFDP+K +HTYS+LWN  Q+VF VD  PIR   N +  G+ FP +Q M +YSS+WNADDWAT+GG  KT+W++APFVASYKGF ID C+  ASV     AK C++  + R WWD+    +L+  Q  +L WVR    IY+YCTD +RFP +P EC   R
Sbjct:   69 FQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQ--ASV----EAKYCAT--QGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDRTRFPVMPAECKRDR 294          
BLAST of CX069506 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 9.427e-73
Identity = 129/234 (55.13%), Postives = 164/234 (70.09%), Query Frame = -2
Query:   85 FASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLFELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECVHHR 786
            F SK  YLFG  S+ IKL  GD+AG VTAFY+SS    H+E DFEFLGN TG+P ++QTNV+  G GNREQR+ LWFDP+K +HTYS+LWN  Q+VF VD  PIRV  N +  G+ FP +Q M +YSS+WNADDWAT+GG  KT+W++APF+ASY+GF ID C+  ASV     AK C++  + R WWD+    +L+  Q  +L WVR    IY+YCTD +RFP +P EC   R
Sbjct:   68 FQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQ--ASV----EAKYCAT--QGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAECRRDR 293          
BLAST of CX069506 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.100e-72
Identity = 123/234 (52.56%), Postives = 161/234 (68.80%), Query Frame = -2
Query:   85 FASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLFELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECVHHR 786
            F SK  YLFG  S+++KLVGGDSAG VTAFY+SS+   H+E DFEFLGN TG+PY++QTNV+  G G+REQR+ LWFDPTK +H+YS+LWN  Q+V  VD+ PIR   N +  G+ FP +Q M +YSS+W+ADDWAT+GG  KTDWS+APF ASY  F +D CE     A     + C++   +  WWD+    +L+  Q  +L WVR  + IY+YCTD  R+P +P EC   R
Sbjct:   66 FQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCE----AATPQEVQVCNTKGMR--WWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPECTKDR 293          
BLAST of CX069506 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 6.110e-72
Identity = 125/231 (54.11%), Postives = 160/231 (69.26%), Query Frame = -2
Query:   97 FASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFVASYKGFEIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLFELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTEC 786
            F SK +YLFG++ +Q+KLV G+SAGTVTA+Y+SS+GP H+E DFEFLGN TG+PY++ TNV+  G GNREQ+  LWFDPTK FHTYSL+W  + ++F+VD  PIRV  N E  G+PFPK+Q M +YSS+WNADDWAT+GG VKTDWS APF A Y+GF   AC   +  +  D   K S +       +     ELN +   +L WV+   +IYDYC+D  RFP   P EC
Sbjct:   61 FKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPTHDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSSFTN-----GESQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPEC 286          
The following BLAST results are available for this feature:
BLAST of CX069506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH9_ARATH2.295e-11178.30Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_SOYBN1.660e-7758.72Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT1.405e-7655.98Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH1.405e-7656.41Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN1.554e-7556.84Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTHB_PHAAN1.718e-7455.98Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH4.231e-7355.56Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_BRAOB9.427e-7355.13Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH_TOBAC2.100e-7252.56Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH6.110e-7254.11Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10H07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10H07-O14-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069506 ID=CX069506; Name=CX069506; organism=Citrus sinensis; type=EST; length=787bp
TTTTTTTTTTTTTTTTTCAACTTTTTTACATAAAAAACGCAAATCCTTTT
TCCTTCAGTCATTCACAATCATTCATGGCTAGTGGCGGTGGTGCACGCAC
TCGGTGGGAATAGCTGGGAACCTAGACGTGTCAGTGCAATAGTCATAGAT
GAGGTGATTGGCTCTAACCCACATGAGCTGGTGGCTTTGGTGCACATTGA
GCTCAAACAATGTTGGCTCATCCCACCAAAACCTTTTCTCAGCACTGCTG
CTGCATTTTTTGGCATTATCGGCACCTGCAACCGACGCTGGGCACTCACA
TGCATCAATTTCAAAGCCCTTGTATGATGCAACAAAAGGTGCATGGCTCC
AGTCCGTCTTGACCCTTCCCCCCTGTGTGGCCCAGTCATCAGCATTCCAT
ATTGAACTGTACACACCCATGGCTTGGTCCTTTGGGAAGGGAATTCCTTT
GTGCTCCAAGTTAGTGTGCACTCTAATTGGGGTCTCATCCACCAAAAATA
CAACTTGGCGCTGGTTCCAAAGGAGGGAATAGGTATGAAATTCCTTTGTT
GGGTCGAACCAGAGGTCAAGTCTCTGCTCTCTGTTGCCCACACCATTCAC
ATAAACATTGGTTTGGACTAAGTATGGCTCTCCTGTAGTGTTCCCCAGGA
ACTCAAAATCGAACTCGTTGTGATTTGGACCGTCTGATGACATATAGAAG
GCAGTGACAGTTCCAGCAGAGTCACCCCCTACAAGTTTAATTTGGATGGA
GACTTTCCCAAACAAATACTTGCTCTTTGACGCAAAC
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