CX069490

Overview
NameCX069490
Unique NameCX069490
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069490 vs. ExPASy Swiss-Prot
Match: PWD_ARATH (Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana GN=GWD3 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 9.801e-61
Identity = 98/122 (80.33%), Postives = 109/122 (89.34%), Query Frame = 1
Query:   85 DHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIHLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYVVQTRPQP 450
            D N VEAEIAPGLGETLASGTRGTPWRL+SGK DG+V+T AFANFSEE+LVSG GPADG  + LTVDYSKK LTVD +FR+QLGQRL SVGFFLER FGC QDVEGCLVG+D+Y+VQ+RPQP
Sbjct: 1074 DSNLVEAEIAPGLGETLASGTRGTPWRLASGKLDGIVQTLAFANFSEELLVSGTGPADGKYVRLTVDYSKKRLTVDSVFRQQLGQRLGSVGFFLERNFGCAQDVEGCLVGEDVYIVQSRPQP 1195          

HSP 2 Score: 49.6766 bits (117), Expect = 9.801e-61
Identity = 23/27 (85.19%), Postives = 26/27 (96.30%), Query Frame = 2
Query:    2 DATMAVLVQEMLSPDLSFVLHTLSPTD 82
            +A+MAVLVQEMLSPDLSFVLHT+SP D
Sbjct: 1046 EASMAVLVQEMLSPDLSFVLHTVSPAD 1072          
BLAST of CX069490 vs. ExPASy Swiss-Prot
Match: PWD_ORYSJ (Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica GN=GWD3 PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.627e-54
Identity = 89/126 (70.63%), Postives = 105/126 (83.33%), Query Frame = 1
Query:   73 PNRYDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIHLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYVVQTRPQP 450
            P  +D   V+AE+APGLGETLASGTRGTPWRLS  KFDG V T AF+NFSEEM+V  +GPA+G VI LTVDYSKKPL+VD  FR+Q GQRL ++G +LE+KFG  QDVEGCLVGKDI++VQ+RPQP
Sbjct: 1081 PADHDPKVVQAEVAPGLGETLASGTRGTPWRLSCNKFDGKVATLAFSNFSEEMVVHNSGPANGEVIRLTVDYSKKPLSVDTTFRKQFGQRLAAIGQYLEQKFGSAQDVEGCLVGKDIFIVQSRPQP 1206          

HSP 2 Score: 47.7506 bits (112), Expect = 1.627e-54
Identity = 22/27 (81.48%), Postives = 24/27 (88.89%), Query Frame = 2
Query:    2 DATMAVLVQEMLSPDLSFVLHTLSPTD 82
            DATMAVLVQE+L PDLSFVLHT+ P D
Sbjct: 1057 DATMAVLVQEILQPDLSFVLHTVCPAD 1083          
BLAST of CX069490 vs. ExPASy Swiss-Prot
Match: GWD2_ARATH (Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 49/164 (29.88%), Postives = 74/164 (45.12%), Query Frame = 1
Query:   43 RSLICASYP------QPNRYDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRT------QAFANFSEEMLV-------------SGAGPADGVVI----HLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYVVQTRPQ 447
            + +IC  Y        P   D + +  EI  GLGETL     G      + K +    T      +    +S+  ++             +GAG  D V++     + VDYS++PL +D  FR +L   +   G  +E  +GCPQD+EG + G  IY+VQ RPQ
Sbjct: 1114 QEVICGDYAFVIHTNNPVSGDSSEIYTEIVKGLGETLVGAYPGRAMSFITKKTNLKSPTVISYPSKRIGLYSKPSIIFRSDSNNEDLEGNAGAGLYDSVIMDEAEEVVVDYSREPLIMDKSFRVRLFSAIAEAGNVIESIYGCPQDIEGVVKGGHIYIVQARPQ 1277          
The following BLAST results are available for this feature:
BLAST of CX069490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PWD_ARATH9.801e-6180.33Phosphoglucan, water dikinase, chloroplastic OS=Ar... [more]
PWD_ORYSJ1.627e-5470.63Phosphoglucan, water dikinase, chloroplastic OS=Or... [more]
GWD2_ARATH2.502e-1129.88Alpha-glucan water dikinase 2 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_10G06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G06-M12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069490 ID=CX069490; Name=CX069490; organism=Citrus sinensis; type=EST; length=645bp
AGATGCTACAATGGCAGTTCTTGTGCAAGAAATGCTTTCCCCAGATCTCT
CATTTGTGCTTCATACCCTCAGCCCAACAGATATGACCATAACTCTGTAG
AGGCTGAAATTGCCCCTGGACTTGGTGAAACTCTAGCTTCTGGTACCAGA
GGCACACCGTGGCGTCTGTCTTCTGGGAAGTTTGATGGGCTGGTGAGGAC
ACAGGCGTTTGCCAATTTCAGTGAAGAGATGCTCGTATCTGGTGCAGGTC
CTGCTGATGGGGTAGTGATTCACTTGACTGTAGATTATAGCAAGAAACCC
TTAACAGTTGATCCAATTTTCCGTCGTCAGCTCGGTCAGCGCCTCTGTTC
TGTTGGTTTCTTTCTTGAGAGGAAGTTTGGCTGCCCACAGGACGTAGAAG
GATGCCTGGTTGGCAAGGATATCTATGTAGTCCAAACGCGTCCACAACCC
CACTAAAATATTCACGCTTCCGAGACTGTTCTGTTCTAGTTTTTTTACTA
GGGGCAGCAGCTTCGCTCAAACCAAGAGTCAGTGATCTTGTTAGTTGTTT
GATTGTCAGATATTAATTAGTAAAAAGACATCCTGGCTTGTGCACCCTTT
GTGCTGTTGCAGAAAAGTACGGCATGCAATTTATGTATTATTCAC
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