DR403814

Overview
NameDR403814
Unique NameDR403814
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length618
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11001 contig Csv1_Contig11001:417..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGP1_ARATH (Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 1.547e-52
Identity = 113/203 (55.67%), Postives = 142/203 (69.95%), Query Frame = 2
Query:    8 KLQMDELETIRIFEENISSVVWIGNLGIREDQSETEFL---RGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDREI----PGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTFI--TSGAFSGIGFALP 589
            KLQ DEL T+R+F+EN  SVV+I NL +R+D    + L   +GSG+GF+WD+ GHIVTNYHVI GAS ++V+ +DQ+TF A+VVG DQ  D+AVL IDAP ++LRPI VGVSADL VGQK++AIG+P G   T TTGVIS L REI     GR IQ VIQ DA++N               IG+NT I   SGA SG+GF++P
Sbjct:  113 KLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIP 315          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGP5_ARATH (Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana GN=DEGP5 PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 3.707e-30
Identity = 86/219 (39.27%), Postives = 118/219 (53.88%), Query Frame = 2
Query:    8 KLQMDELETIRIFEENISSVVWIGNLGIREDQS-------ETEFLRGSGAGFLWDQDGHIVTNYHVIC-------GASTVKVSFSD-QSTFYAQ---VVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDREIP---GRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTFI----TSGAFSGIGFALP 589
            +L+ +E   + +F++   SVV+I  + + +  S       E   + G+G+GF+WD+ GHIVTNYHVI        G    KVS  D + T +++   +VG D  NDLAVL I+    EL P+ +G S DLRVGQ  +AIG+P G+  T T GV+S L REIP   G+ I   IQ DA +N               IGVNT       SG  SG+ FA+P
Sbjct:   83 ELEEEEERNVNLFQKTSPSVVYIEAIELPKTSSGDILTDEENGKIEGTGSGFVWDKLGHIVTNYHVIAKLATDQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKIETEGRELNPVVLGTSNDLRVGQSCFAIGNPYGYENTLTIGVVSGLGREIPSPNGKSISEAIQTDADINSGNSGGPLLDSYGHTIGVNTATFTRKGSGMSSGVNFAIP 301          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGP8_ARATH (Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.841e-30
Identity = 84/207 (40.58%), Postives = 116/207 (56.04%), Query Frame = 2
Query:   35 IRIFEENISSVVWIGNLGIREDQSET---EFLRGSGAGFLWDQDGHIVTNYHVICGAST-----------VKVSFSD--QSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDREI---PGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNT--FITSGAFSGIGFALPN 592
            +++FE+N  SVV I ++ +R     T   E   G+G+G +WD  G+IVTNYHVI  A +           V +  SD  Q  F  ++VG D+  DLAVL +DAP   L+PI VG S  L+VGQ+  AIG+P G+  T T GVIS L+R+I    G  I G IQ DA++N               IG+NT  F  +G  +G+GFA+P+
Sbjct:  120 VQLFEKNTYSVVNIFDVTLRPQLKMTGVVEIPEGNGSGVVWDGQGYIVTNYHVIGNALSRNPSPGDVVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQSNSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQTGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIFTQTGTSAGVGFAIPS 326          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: Y938_SYNP6 (Uncharacterized serine protease syc0938_d OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc0938_d PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21
Identity = 61/164 (37.20%), Postives = 86/164 (52.44%), Query Frame = 2
Query:  113 EFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDRE-----IPGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTFITSGAFSGIGFALP 589
            E  RG G+GF+ D +G I+TN HV+  A  V+V+  D   F  +V G D V DLA++ +D     L    +G S+++ VG    AIG+PLG   T T G++S+L R      IP + +   IQ DA +N               IG+NT I     +GIGFA+P
Sbjct:  119 EVQRGQGSGFVVDGNGLIMTNAHVVANADQVRVTLRDGREFTGRVRGADSVTDLALVEVDTKGERLPTARIGNSSNVEVGDWAIAIGNPLGLDNTVTLGIVSSLGRRSSAVGIPDKRLD-FIQTDAVINPGNSGGPLVNSRGEVIGINTAIRQAPGAGIGFAIP 281          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGP_BRUSU (Probable serine protease do-like OS=Brucella suis GN=degP PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.663e-20
Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 2
Query:  131 GAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDREIPGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNT--FITSGAFSGIGFALPN 592
            G+GF+  +DG++VTN HV+       V   D +   A+++G D   DLAVL I+AP  +   +  G    +RVG  + A+G+P G   T T+G++SA  R+I        IQIDA+VN               IG+NT  F  SG   GI FA+P+
Sbjct:  136 GSGFVISEDGYVVTNNHVVSDGDAYTVVLDDGTELDAKLIGADPRTDLAVLKINAPKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRDIGAGPYDDFIQIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGGSVGIAFAIPS 291          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGP_BRUME (Probable serine protease do-like OS=Brucella melitensis GN=degP PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.663e-20
Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 2
Query:  131 GAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDREIPGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNT--FITSGAFSGIGFALPN 592
            G+GF+  +DG++VTN HV+       V   D +   A+++G D   DLAVL I+AP  +   +  G    +RVG  + A+G+P G   T T+G++SA  R+I        IQIDA+VN               IG+NT  F  SG   GI FA+P+
Sbjct:  136 GSGFVISEDGYVVTNNHVVSDGDAYTVVLDDGTELDAKLIGADPRTDLAVLKINAPKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRDIGAGPYDDFIQIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGGSVGIAFAIPS 291          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGP_BRUAB (Probable serine protease do-like OS=Brucella abortus GN=degP PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.663e-20
Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 2
Query:  131 GAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDREIPGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNT--FITSGAFSGIGFALPN 592
            G+GF+  +DG++VTN HV+       V   D +   A+++G D   DLAVL I+AP  +   +  G    +RVG  + A+G+P G   T T+G++SA  R+I        IQIDA+VN               IG+NT  F  SG   GI FA+P+
Sbjct:  136 GSGFVISEDGYVVTNNHVVSDGDAYTVVLDDGTELDAKLIGADPRTDLAVLKINAPKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRDIGAGPYDDFIQIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGGSVGIAFAIPS 291          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGP_BRUA2 (Probable serine protease do-like OS=Brucella abortus (strain 2308) GN=degP PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.663e-20
Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 2
Query:  131 GAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDREIPGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNT--FITSGAFSGIGFALPN 592
            G+GF+  +DG++VTN HV+       V   D +   A+++G D   DLAVL I+AP  +   +  G    +RVG  + A+G+P G   T T+G++SA  R+I        IQIDA+VN               IG+NT  F  SG   GI FA+P+
Sbjct:  136 GSGFVISEDGYVVTNNHVVSDGDAYTVVLDDGTELDAKLIGADPRTDLAVLKINAPKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRDIGAGPYDDFIQIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGGSVGIAFAIPS 291          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: HTRA_BACSU (Probable serine protease do-like htrA OS=Bacillus subtilis GN=htrA PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.477e-20
Identity = 64/180 (35.56%), Postives = 98/180 (54.44%), Query Frame = 2
Query:   86 GIREDQSETEFLRGSGAGFLWDQDG---HIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLG--WSFTCTTGVISALDREI-----PGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTF-ITSGAFSGIGFALPN 592
            G     S  +   GSG+G ++ ++    +I+TN HV+ GAS++KVS  D +   A++VG D + DLAVL I + +H  +  + G S+DLR G+ + AIG PLG   S T T G++S +DR +      G     VIQ DA++N               +G+N+  I+     GIGFA+P+
Sbjct:  145 GSSSSDSSEDTESGSGSGVIFKKENGKAYIITNNHVVEGASSLKVSLYDGTEVTAKLVGSDSLTDLAVLQI-SDDHVTKVANFGDSSDLRTGETVIAIGDPLGKDLSRTVTQGIVSGVDRTVSMSTSAGETSINVIQTDAAINPGNSGGPLLNTDGKIVGINSMKISEDDVEGIGFAIPS 323          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGP_RICPR (Probable serine protease do-like OS=Rickettsia prowazekii GN=degP PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.726e-19
Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  131 GAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLG-WSFTCTTGVISALDREI---PGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTFITS--GAFSGIGFALPN 592
            G+GF+   +G IVTNYHVI     + +  +D + F A+++G D   DLA+L ID+    L  +  G S D RVG  + AIG+P G    T T+G+IS+  R+I      ++   IQ DA++N               IGVNT I S  G   GIGFA+P+
Sbjct:  123 GSGFIIAPNGLIVTNYHVIANVEKINIKLADNTEFLAKLIGSDSKTDLALLKIDS-EEPLPFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDIDVDTDNIVDNFIQTDAAINNGNSGGPMFNLDQKVIGVNTAIFSPLGTNIGIGFAIPS 281          
The following BLAST results are available for this feature:
BLAST of DR403814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
DEGP1_ARATH1.547e-5255.67Protease Do-like 1, chloroplastic OS=Arabidopsis t... [more]
DEGP5_ARATH3.707e-3039.27Protease Do-like 5, chloroplastic OS=Arabidopsis t... [more]
DEGP8_ARATH4.841e-3040.58Protease Do-like 8, chloroplastic OS=Arabidopsis t... [more]
Y938_SYNP61.844e-2137.20Uncharacterized serine protease syc0938_d OS=Synec... [more]
DEGP_BRUSU2.663e-2036.54Probable serine protease do-like OS=Brucella suis ... [more]
DEGP_BRUME2.663e-2036.54Probable serine protease do-like OS=Brucella melit... [more]
DEGP_BRUAB2.663e-2036.54Probable serine protease do-like OS=Brucella abort... [more]
DEGP_BRUA22.663e-2036.54Probable serine protease do-like OS=Brucella abort... [more]
HTRA_BACSU3.477e-2035.56Probable serine protease do-like htrA OS=Bacillus ... [more]
DEGP_RICPR1.726e-1938.13Probable serine protease do-like OS=Rickettsia pro... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246F16 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246F16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403814 ID=DR403814; Name=DR403814; organism=Citrus sinensis; type=EST; length=618bp
GGGGTGTAAGCTTCAGATGGATGAACTTGAAACGATCCGTATTTTTGAAG
AAAACATATCTTCAGTTGTTTGGATCGGCAACCTTGGTATCCGTGAGGAT
CAAAGTGAGACAGAGTTCCTTCGGGGAAGCGGGGCGGGTTTTTTATGGGA
TCAAGATGGTCACATTGTCACTAACTATCATGTGATTTGTGGCGCTTCTA
CAGTCAAGGTCAGTTTTTCTGACCAATCAACTTTCTATGCACAAGTTGTT
GGTCATGACCAAGTCAATGATTTGGCAGTGTTGCACATTGATGCTCCAAA
TCACGAATTAAGACCTATACATGTTGGTGTCTCTGCTGACTTGCGTGTTG
GTCAAAAAATCTATGCAATTGGCCACCCTCTTGGATGGTCATTTACCTGT
ACAACTGGCGTGATCAGTGCACTTGATAGGGAAATCCCTGGCCGTTTAAT
TCAAGGTGTTATACAGATTGATGCTTCCGTTAATCTTGGTAACAGTGGAG
GGCCGCTTCTGGATAGTTCAGGAAGCCTGATTGGAGTAAATACATTTATT
ACCTCTGGTGCATTCAGTGGTATTGGATTTGCCTTACCCAATTGACACGG
TACGTGGCATTGTTGACC
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